EWM23512.1, cds7162 (CDS) Nannochloropsis gaditana

Overview
NameEWM23512.1
Unique Namecds7162
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:646195..646503 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23512.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100352g4.220.mrna
GbkeyCDS
End range.
End range646503
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:646195..646503 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23512.1 vs. NCBI_GenBank
Match: gi|585104594|gb|EWM23512.1| (hypothetical protein Naga_100352g4, partial [Nannochloropsis gaditana])

HSP 1 Score: 193.741 bits (491), Expect = 1.882e-62
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 PPSFPPTVFGPRSSGTGRTASSRHGLGLGGGGERERGRAGGTEGGILVLPDGRVPLPVPRRPSAFDRAHSRRNSLLPREQLIAKERGTVIVFHTSLSSLFSS 102
            PPSFPPTVFGPRSSGTGRTASSRHGLGLGGGGERERGRAGGTEGGILVLPDGRVPLPVPRRPSAFDRAHSRRNSLLPREQLIAKERGTVIVFHTSLSSLFSS
Sbjct:    1 PPSFPPTVFGPRSSGTGRTASSRHGLGLGGGGERERGRAGGTEGGILVLPDGRVPLPVPRRPSAFDRAHSRRNSLLPREQLIAKERGTVIVFHTSLSSLFSS 102
The following BLAST results are available for this feature:
BLAST of EWM23512.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104594|gb|EWM23512.1|1.882e-62100.00hypothetical protein Naga_100352g4, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7179rna7179Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications