EWM23516.1, cds7157 (CDS) Nannochloropsis gaditana

Overview
NameEWM23516.1
Unique Namecds7157
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:625399..625586 +
Alignment locationCM002470.1:625763..625926 +
Alignment locationCM002470.1:626130..626227 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23516.1
Productalpha beta hydrolase fold protein
Orig transcript idgnl|cribi|Naga_101326g1.2175.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:625399..625586 +
CM002470.1supercontigCM002470.1:625763..625926 +
CM002470.1supercontigCM002470.1:626130..626227 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Homology
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|585104601|gb|EWM23516.1| (alpha beta hydrolase fold protein [Nannochloropsis gaditana])

HSP 1 Score: 306.99 bits (785), Expect = 9.002e-106
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query:    1 MRPQVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDEELEE 149
            MRPQVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDEELEE
Sbjct:    1 MRPQVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDEELEE 149          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|873236120|emb|CEL99532.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 120.939 bits (302), Expect = 2.914e-30
Identity = 57/144 (39.58%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    4 QVISLLSSLPLSSLSTKNEVDRALQ-EKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHK--TLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLD 144
            ++I+ L +LPL +LST+ + DR L+ E G+ D  +RAF LTN+ + E   RW INL  I  +L ++A FD+     +      P++  TLF+ G  S+Y+++ HL  I +LF +F+L T+++AGHWVHA++P+  + +++ YLD
Sbjct:  193 RIINGLQALPLHALSTRQDADRGLRDEHGIDDDALRAFVLTNLERHEDSWRWRINLDAIARSLEDLALFDLEAAWGSESELPPPYEGDTLFVMGSNSRYIQSRHLDVIQRLFASFTLQTVKEAGHWVHADQPDRMVQVVKAYLD 336          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|397628485|gb|EJK68923.1| (hypothetical protein THAOC_09864 [Thalassiosira oceanica])

HSP 1 Score: 116.701 bits (291), Expect = 1.507e-28
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0
Query:    5 VISLLSSLPLSSLSTKNEVDRALQEKGLL-DGGMRAFALTNVVQGEAG-------VRWEINLAGIESALPEIAAFDVGG-------DDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDE 145
            ++  +S + +S+ S K EVDR   E G+L D  +RAF LTN+ Q  A        ++W+IN  GI + L  IA FD  G       DDS   S  Y   T +++GG S++++T+++  I +LFP   L TIR AGHWVHAE PEET+ +++ YLD 
Sbjct:  210 IVRSVSKVDVSAFSNKREVDRHFLEHGILEDAALRAFVLTNLDQPRAAKGQEAPPMKWKINWNGIVNELNSIAGFDAAGCILDESVDDSER-SHRYDGDTFYISGGASRFVQTSYIPQIQRLFPNHLLTTIRGAGHWVHAEAPEETIKLLRTYLDR 364          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|224002210|ref|XP_002290777.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974199|gb|EED92529.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 107.457 bits (267), Expect = 4.983e-26
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 0
Query:    4 QVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQ------GEAGVRWEINLAGIESALPEIAAFDVGG---------DDSTSCST----AYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLD 144
            +++  ++ L L    TK +VD  L++  L D  +RAF LTN+ Q       E  ++W+I+  GI + L  IA FD            DD+ S        Y     F++GG S+++R +H+STIA  FP   L TIR  GHWVHAE P++T+ ++++YLD
Sbjct:   79 EIVRSVAELNLEGCKTKRDVDAILRDGILEDPALRAFVLTNLEQIRSEDESEPPLKWKIHWEGIVNELDRIAGFDAHDEPLDELPLDDDNVSSEQLSRYKYEGDVFFIHGGASRFVRHSHISTIANFFPNHMLTTIRGVGHWVHAEAPDDTIALLKKYLD 238          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|1005464482|ref|XP_015769260.1| (PREDICTED: protein ABHD11-like isoform X2 [Acropora digitifera])

HSP 1 Score: 108.227 bits (269), Expect = 7.146e-26
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 0
Query:    3 PQVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPH-----KTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDEELEE 149
            PQ ++    + L+ ++ K + +R L    + +  +R+F LTN+V+ E+G +W INL GIES + E++ F           T +PH     +TLF+ GGKS Y++   L +I  LFP  S+  I D+GHW HAEKP E   I+  +LD  L++
Sbjct:  139 PQYLAAKRDMNLAFVNNKQDAERMLMN-AVPNSFLRSFFLTNLVKSESGFKWRINLEGIESNISEVSGF----------PTQFPHQQFDGRTLFIGGGKSDYIQFKELPSIKNLFPRASIKFIPDSGHWPHAEKPMEFAQIVTDFLDNHLQD 279          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|1005464480|ref|XP_015769259.1| (PREDICTED: protein ABHD11-like isoform X1 [Acropora digitifera])

HSP 1 Score: 108.227 bits (269), Expect = 1.138e-25
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 0
Query:    3 PQVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPH-----KTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDEELEE 149
            PQ ++    + L+ ++ K + +R L    + +  +R+F LTN+V+ E+G +W INL GIES + E++ F           T +PH     +TLF+ GGKS Y++   L +I  LFP  S+  I D+GHW HAEKP E   I+  +LD  L++
Sbjct:  171 PQYLAAKRDMNLAFVNNKQDAERMLM-NAVPNSFLRSFFLTNLVKSESGFKWRINLEGIESNISEVSGF----------PTQFPHQQFDGRTLFIGGGKSDYIQFKELPSIKNLFPRASIKFIPDSGHWPHAEKPMEFAQIVTDFLDNHLQD 311          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|1182631445|gb|ORU91332.1| (alpha/beta hydrolase [Cycloclasticus sp. symbiont of Poecilosclerida sp. N])

HSP 1 Score: 106.301 bits (264), Expect = 2.307e-25
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    5 VISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNV-VQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDE 145
            V++ L  +PL ++S + + +  L EK + D G+R F L N+ V    G +W +NLA IE  +P I  F + GD        Y  KT F+ GGKS YL + + S IA +FP  +  T++ AGHW H E P E ++++  +LDE
Sbjct:  122 VLAGLYHVPLDTVSCRKDAEAYLAEK-ISDTGLRQFLLQNLAVNTAGGYQWRVNLASIEDEMPSIMGFSLDGD------RVYSGKTQFIRGGKSTYLASRYQSAIADMFPNMTFETVKKAGHWPHIESPREFMSVLNTFLDE 256          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|219123331|ref|XP_002181980.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406581|gb|EEC46520.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 100.908 bits (250), Expect = 3.376e-23
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    5 VISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCSTAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDE 145
            ++ +L ++ L S  TK  VD  L+   + D  +RAF LTN+     G RW+I+L  I S L  +A FDV  DDS      Y   T  ++G +S+++R A++ TI   FP   L TIR AGHWVHAE PE+T  +++R+LD 
Sbjct:  130 IVHVLQTIELKSGVTKRSVDEQLRVD-IPDPALRAFCLTNI-DFTTG-RWKIHLDAIASQLERLAGFDV--DDSLQ----YEGDTFIIHGQQSRFVRHAYMDTIRSYFPNHMLTTIRGAGHWVHAEAPEDTTALLKRFLDR 261          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|299472645|emb|CBN78297.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 102.449 bits (254), Expect = 6.682e-23
Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 0
Query:    4 QVISLLSSLPLSSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEA--GVRWEINLAGIESALPEIAAFDVGGDDSTSCST----------------AYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDE 145
            ++I  +  +PL  ++++ + D  L  K ++D  +RAFA+TN+ +  A  G  W IN+  I+ ++  +A FD G                         AY    LF+ GG S+Y+R+ HL  I +LFP F ++TI+ AGHWVHA+ P ETL + + +LD 
Sbjct:  235 KIIEAIHKMPLEGVTSRRDADELL-AKDIVDPALRAFAVTNLDKDPASGGWAWRINIDAIQRSMGVLAQFDSGKRHQEEIDGRLKGGGRGDGDADELGAYKGDALFVAGGNSRYIRSQHLKEIGKLFPRFVVSTIKGAGHWVHADNPTETLRLAKSFLDR 393          
BLAST of EWM23516.1 vs. NCBI_GenBank
Match: gi|1072237667|gb|OEU22394.1| (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 98.5969 bits (244), Expect = 3.202e-22
Identity = 51/135 (37.78%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   15 SSLSTKNEVDRALQEKGLLDGGMRAFALTNVVQGEAGVRWEINLAGIESALPEIAAFDVGGDDSTSCS----TAYPHKTLFLNGGKSKYLRTAHLSTIAQLFPTFSLATIRDAGHWVHAEKPEETLNIIQRYLDE 145
            + + TK ++D +L++K + D  +RAF LTN        +W+I ++ I   L +IA FD+    +T+      ++Y      +NGG+S+++R A++  IA  FP   L TIR AGHWVHAE P++T+ +I+RYLD 
Sbjct:  157 NKIITKRDIDLSLRQK-IPDPALRAFVLTNF--DSKNNQWKIPISTIVDELEQIAGFDLVLPSATNAGESSSSSYEGDVFIINGGQSRFVRHAYMDQIASFFPNHMLTTIRGAGHWVHAEAPDDTVALIKRYLDR 288          
The following BLAST results are available for this feature:
BLAST of EWM23516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104601|gb|EWM23516.1|9.002e-106100.00alpha beta hydrolase fold protein [Nannochloropsis... [more]
gi|873236120|emb|CEL99532.1|2.914e-3039.58unnamed protein product [Vitrella brassicaformis C... [more]
gi|397628485|gb|EJK68923.1|1.507e-2841.03hypothetical protein THAOC_09864 [Thalassiosira oc... [more]
gi|224002210|ref|XP_002290777.1|4.983e-2636.25predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1005464482|ref|XP_015769260.1|7.146e-2636.84PREDICTED: protein ABHD11-like isoform X2 [Acropor... [more]
gi|1005464480|ref|XP_015769259.1|1.138e-2536.84PREDICTED: protein ABHD11-like isoform X1 [Acropor... [more]
gi|1182631445|gb|ORU91332.1|2.307e-2538.03alpha/beta hydrolase [Cycloclasticus sp. symbiont ... [more]
gi|219123331|ref|XP_002181980.1|3.376e-2341.13predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|299472645|emb|CBN78297.1|6.682e-2333.75conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072237667|gb|OEU22394.1|3.202e-2237.78alpha/beta-hydrolase [Fragilariopsis cylindrus CCM... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7174rna7174Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications