EWM23518.1, cds7156 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|585104604|gb|EWM23518.1| (hypothetical protein Naga_101003g1 [Nannochloropsis gaditana]) HSP 1 Score: 268.47 bits (685), Expect = 5.754e-91 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 1 MASLQSPPQPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSYR 135
MASLQSPPQPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSYR
Sbjct: 1 MASLQSPPQPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSYR 135
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|553177282|ref|XP_005852450.1| (hypothetical protein NGA_0680800, partial [Nannochloropsis gaditana CCMP526] >gi|422296082|gb|EKU23381.1| hypothetical protein NGA_0680800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 204.142 bits (518), Expect = 5.417e-66 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
Query: 1 MASLQSPPQPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTL 105
MASLQSP QPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTL
Sbjct: 1 MASLQSPLQPKLVFLLLVAVLCRHTSYAFVFPSHLTASLGSGGPSQLLPALKPATLPSAPVAHPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTL 105
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|299472645|emb|CBN78297.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.0998 bits (183), Expect = 2.842e-13 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
Query: 41 SGGPSQLLPALKPATLPSAPVAHPLPS--LHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
SGGPS A ++ VA P + L +D N + PV+++HGLLG+SRNF+GW L + L++ RR+ D+RNHG S H M+Y
Sbjct: 72 SGGPSMSAGAAVLSSSTKKKVARPAGAAKLESIDFNPSASSSSFTPVVIMHGLLGNSRNFQGWGAKLVKSLDQERRVFAVDMRNHGASSHHDSMTY 167
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|496388472|ref|WP_009097462.1| (alpha/beta hydrolase [Halomonas sp. GFAJ-1] >gi|359297266|gb|EHK61502.1| alpha/beta hydrolase fold protein [Halomonas sp. GFAJ-1]) HSP 1 Score: 70.4774 bits (171), Expect = 6.349e-12 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 0
Query: 67 SLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRG----WANTLHERLEKPRRILVPDLRNHGRSPHVAGMSYR 135
LH +DL + + D LP++V+HGLLGS+ N+R W T RR++ DLRNHGRSPHV GMSY+
Sbjct: 8 ELHVIDLPAEQGSHDQLPLVVIHGLLGSADNWRSHLKVWQQT--------RRVIAVDLRNHGRSPHVEGMSYK 72
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|497410144|ref|WP_009724342.1| (alpha/beta hydrolase [Halomonas sp. TD01] >gi|338763635|gb|EGP18624.1| alpha/beta hydrolase fold protein [Halomonas sp. TD01]) HSP 1 Score: 67.781 bits (164), Expect = 7.079e-11 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0
Query: 63 HPLPSLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
H L+ +DL D LPV+V+HGLLGS+ N+R ++ RR++ DLRNHGRSPHV GMSY
Sbjct: 4 HANVDLYVIDLPAESGGDDQLPVVVIHGLLGSADNWRSHLKVW----QRSRRVIAVDLRNHGRSPHVEGMSY 71
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|1178482186|ref|WP_083004022.1| (alpha/beta hydrolase [Halomonas sp. GT]) HSP 1 Score: 67.3958 bits (163), Expect = 8.680e-11 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 67 SLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
L+ +DL + D LP++V+HGLLGS+ N+R H + RR++ DLRNHGRSPH GMSY
Sbjct: 8 DLYVIDLPDESGSDDQLPIVVIHGLLGSADNWRSHLKVWH----RSRRVVAVDLRNHGRSPHAEGMSY 71
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|1110720273|ref|WP_071946080.1| (alpha/beta hydrolase [Halomonas aestuarii] >gi|1108540536|gb|APE32186.1| alpha/beta hydrolase [Halomonas aestuarii]) HSP 1 Score: 67.0106 bits (162), Expect = 1.047e-10 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0
Query: 71 LDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSYR 135
+DLN + D P++V+HGLLGS+ N+R A R RR++ DLRNHGRSPHVAGM Y
Sbjct: 3 IDLNFTDTGGDGTPLVVVHGLLGSADNWRSHAKQWQRR----RRVIAVDLRNHGRSPHVAGMGYE 63
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|662121164|ref|WP_030073078.1| (alpha/beta hydrolase [Halomonas alkaliantarctica]) HSP 1 Score: 65.855 bits (159), Expect = 3.191e-10 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 67 SLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
L+ +DL + D LP++V+HGLLGS+ N+R ++ RR++ DLRNHGRSPH GMSY
Sbjct: 8 DLYIIDLPDESGSDDQLPIVVIHGLLGSADNWRSHLKVW----QRSRRVIAVDLRNHGRSPHAEGMSY 71
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|515999813|ref|WP_017430396.1| (hypothetical protein [Halomonas jeotgali]) HSP 1 Score: 65.855 bits (159), Expect = 3.569e-10 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 56 LPSAPVAHPLPSLHYLDLNRREDT---KDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
+PSA P+ +L+ +D RED+ ++ LP++++HGLLGS N+R H + RR++ DLRNHGRSPH GMSY
Sbjct: 1 MPSAHAPSPV-ALYCIDSADREDSAPPEEELPLVIIHGLLGSGDNWRSHIRAWHSQ----RRVVAVDLRNHGRSPHAEGMSY 77
BLAST of EWM23518.1 vs. NCBI_GenBank
Match: gi|1123863816|ref|WP_074396328.1| (alpha/beta hydrolase [Halomonas sp. HL-93] >gi|938286733|gb|KPQ21137.1| putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [Halomonas sp. HL-93] >gi|1036083979|emb|SBR48694.1| esterase [Halomonas sp. HL-93]) HSP 1 Score: 65.4698 bits (158), Expect = 4.937e-10 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 67 SLHYLDLNRREDTKDHLPVLVLHGLLGSSRNFRGWANTLHERLEKPRRILVPDLRNHGRSPHVAGMSY 134
LHYLD ++ D +P++V+HGLLGS+ N+R T + RR++ DLRNHGRSPH AGMSY
Sbjct: 8 DLHYLD-QPSDEHPDAIPLVVIHGLLGSADNWRSHLKTW----QTSRRVIAVDLRNHGRSPHAAGMSY 70 The following BLAST results are available for this feature:
BLAST of EWM23518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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