EWM23527.1, cds7147 (CDS) Nannochloropsis gaditana

Overview
NameEWM23527.1
Unique Namecds7147
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:597164..597706 +
Alignment locationCM002470.1:597924..598208 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23527.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100940g2.3591.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:597164..597706 +
CM002470.1supercontigCM002470.1:597924..598208 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23527.1 vs. NCBI_GenBank
Match: gi|553186196|ref|XP_005854377.1| (hypothetical protein NGA_0223100 [Nannochloropsis gaditana CCMP526] >gi|422294683|gb|EKU21983.1| hypothetical protein NGA_0223100 [Nannochloropsis gaditana CCMP526] >gi|585104629|gb|EWM23527.1| hypothetical protein Naga_100940g2 [Nannochloropsis gaditana])

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0 
Query:    1 MESIEALTDVECRAGEEALKRRYCRRANSSTSTPAGPTIHCTQPCSMAIIHAHGKGSRTTTQKTTASRDWTIHKRRLPSGTSRQRKRRRPFLPAMLLLAGAFGNTGPGSEPVEAFIPPRHQGIAPYRERRPLTHTHPGHSHPVFRTTGVSGRSCQSYRDHGPFKRGGAVEDGEEPGSTEDKTTPSFSEDSDGFAGTGLSPKEALVTILGVNPLTLLLAFLAAGMLTANAILGPGWLRPSVGLKPTTFQSRNLVLPLDQPGFLFPKDASLWGGDPE 275
            MESIEALTDVECRAGEEALKRRYCRRANSSTSTPAGPTIHCTQPCSMAIIHAHGKGSRTTTQKTTASRDWTIHKRRLPSGTSRQRKRRRPFLPAMLLLAGAFGNTGPGSEPVEAFIPPRHQGIAPYRERRPLTHTHPGHSHPVFRTTGVSGRSCQSYRDHGPFKRGGAVEDGEEPGSTEDKTTPSFSEDSDGFAGTGLSPKEALVTILGVNPLTLLLAFLAAGMLTANAILGPGWLRPSVGLKPTTFQSRNLVLPLDQPGFLFPKDASLWGGDPE
Sbjct:    1 MESIEALTDVECRAGEEALKRRYCRRANSSTSTPAGPTIHCTQPCSMAIIHAHGKGSRTTTQKTTASRDWTIHKRRLPSGTSRQRKRRRPFLPAMLLLAGAFGNTGPGSEPVEAFIPPRHQGIAPYRERRPLTHTHPGHSHPVFRTTGVSGRSCQSYRDHGPFKRGGAVEDGEEPGSTEDKTTPSFSEDSDGFAGTGLSPKEALVTILGVNPLTLLLAFLAAGMLTANAILGPGWLRPSVGLKPTTFQSRNLVLPLDQPGFLFPKDASLWGGDPE 275
The following BLAST results are available for this feature:
BLAST of EWM23527.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553186196|ref|XP_005854377.1|0.000e+0100.00hypothetical protein NGA_0223100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7164rna7164Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications