EWM23528.1, cds7145 (CDS) Nannochloropsis gaditana

Overview
NameEWM23528.1
Unique Namecds7145
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:593991..594351 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23528.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_103433g1.5892.mrna
GbkeyCDS
End range.
End range594351
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:593991..594351 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM23528.1 vs. NCBI_GenBank
Match: gi|585104632|gb|EWM23528.1| (hypothetical protein Naga_103433g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 226.098 bits (575), Expect = 1.004e-74
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    1 MGAGMNTQELYRIAISYKTKLGPFATPRILNEYLKAVFRAPDLSSHVRPPSLPPFLSLSIYIYICISLSIYMYVYRYRPLLPCAISFPPSLFLSLSIYLSSLPIYLSIYIYIYIYIYIYI 120
            MGAGMNTQELYRIAISYKTKLGPFATPRILNEYLKAVFRAPDLSSHVRPPSLPPFLSLSIYIYICISLSIYMYVYRYRPLLPCAISFPPSLFLSLSIYLSSLPIYLSIYIYIYIYIYIYI
Sbjct:    1 MGAGMNTQELYRIAISYKTKLGPFATPRILNEYLKAVFRAPDLSSHVRPPSLPPFLSLSIYIYICISLSIYMYVYRYRPLLPCAISFPPSLFLSLSIYLSSLPIYLSIYIYIYIYIYIYI 120
The following BLAST results are available for this feature:
BLAST of EWM23528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104632|gb|EWM23528.1|1.004e-74100.00hypothetical protein Naga_103433g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7162rna7162Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications