EWM23529.1, cds7144 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|585104634|gb|EWM23529.1| (dolichol-phosphate mannosyltransferase subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 351.288 bits (900), Expect = 1.195e-122 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 1 MCCSGPTECSSRGCNEQIDITNSNNRKTTELVFAHTGTKGHYTTGVKGIGFLAFVFVSRVISMSRPPPSPALWAPPRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDIDH 169
MCCSGPTECSSRGCNEQIDITNSNNRKTTELVFAHTGTKGHYTTGVKGIGFLAFVFVSRVISMSRPPPSPALWAPPRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDIDH
Sbjct: 1 MCCSGPTECSSRGCNEQIDITNSNNRKTTELVFAHTGTKGHYTTGVKGIGFLAFVFVSRVISMSRPPPSPALWAPPRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDIDH 169
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|553189248|ref|XP_005854963.1| (dolichol-phosphate mannosyltransferase subunit 3-like protein [Nannochloropsis gaditana CCMP526] >gi|422294103|gb|EKU21403.1| dolichol-phosphate mannosyltransferase subunit 3-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 187.193 bits (474), Expect = 1.494e-58 Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
Query: 63 MSRPPPSPALWAPPRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDIDH 169
MSRPPP+PAL APPRWMGLLL+FTLCTAVW MLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLW KGFD DH
Sbjct: 1 MSRPPPNPALLAPPRWMGLLLIFTLCTAVWFMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWEKGFDTDH 107
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|1183421699|gb|ORY46038.1| (dolichol-phosphate mannosyltransferase subunit 3 [Rhizoclosmatium globosum]) HSP 1 Score: 72.0182 bits (175), Expect = 1.763e-13 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 77 RWMGLLLLFTLCTAVW--LMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDID 168
R +LL+F TA W LML+S + Q + ++ PLW+LV+ GAY+L SIG +L+ F CPEA ++L ++I +AK DL +G ID
Sbjct: 4 RAQSILLVFAAGTAAWVLLMLHSVLIPFVPVPQYLDEIAPVLPLWLLVAFGAYSLASIGYALVTFGDCPEAYMSLLKEINEAKTDLKRRGVQID 97
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|470271760|ref|XP_004362932.1| (dolichol-phosphate mannosyltransferase subunit 3 [Dictyostelium fasciculatum] >gi|328876718|gb|EGG25081.1| dolichol-phosphate mannosyltransferase subunit 3 [Dictyostelium fasciculatum]) HSP 1 Score: 66.6254 bits (161), Expect = 2.089e-11 Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 0
Query: 76 PRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKG 164
R+ + ++ + +W +L D LQ F+ + +L PLW++V+ GAY+LGSI +L+ + C EA +LS++I++AK +L KG
Sbjct: 2 KRYQKVTIVTIVTFLIWFVLLVDYLQ-FNLPSSIKSILPALPLWVVVTFGAYSLGSISYNLLIMSDCKEAYESLSDEIKEAKRNLRSKG 89
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|126307785|ref|XP_001373861.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Monodelphis domestica]) HSP 1 Score: 65.0846 bits (157), Expect = 6.471e-11 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 0
Query: 76 PRWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGF 165
+W+ LL+ L +WL L D L S ++Q DV+ P+++LV+ G+Y LG++GL L FN C EA L + I++A+ADL KG
Sbjct: 5 KQWISTLLVLML---IWLCLVQDVL-SLGYSQKFHDVILPLPVYLLVTAGSYMLGTLGLRLANFNDCEEAAQELFQQIQEAQADLASKGL 90
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|914257581|gb|KNZ72949.1| (Dolichol-phosphate mannosyltransferase subunit 3 [Termitomyces sp. J132]) HSP 1 Score: 63.1586 bits (152), Expect = 4.266e-10 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0
Query: 87 LCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDID 168
L T L+ + F + V +++ FP W+LVS G+YAL S+G+ + F CPEA L ++I QAK DL +G +D
Sbjct: 14 LTTLYLLVFFQTITVPFFEDKVVKEIIPVFPWWLLVSFGSYALWSLGMGIFSFRDCPEAYTELLQEISQAKNDLRSRGVTVD 95
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|1023255825|gb|KZT51230.1| (dolichol-phosphate mannosyltransferase subunit 3 [Calocera cornea HHB12733]) HSP 1 Score: 62.7734 bits (151), Expect = 6.812e-10 Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 86 TLCTAVWLMLYSDPLQSFHFTQPVTD-VLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDID 168
+CT ++ +LY + ++ V D +L P W+LVS G+Y+LGS+G+ L+ F CP+A L +I +AK DL KG ++D
Sbjct: 12 AICTLIYALLYLRIIPVPFLSKQVADELLPVIPWWLLVSFGSYSLGSLGMGLLTFRDCPDAHQELLMEISEAKNDLRLKGVEVD 95
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|589269654|ref|XP_007000557.1| (hypothetical protein TREMEDRAFT_24904 [Tremella mesenterica DSM 1558] >gi|392580110|gb|EIW73237.1| hypothetical protein TREMEDRAFT_24904 [Tremella mesenterica DSM 1558]) HSP 1 Score: 62.3882 bits (150), Expect = 7.184e-10 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 109 VTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDID 168
V D+L P W+LV+ G+Y+L S+GL L+ F+ CPEA +L +I QAK +L +G D+D
Sbjct: 36 VDDILPVLPFWLLVTFGSYSLSSLGLGLVRFHDCPEAYESLLMEITQAKNELRDQGVDVD 95
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|598039765|ref|XP_007349255.1| (dolichol-phosphate mannosyltransferase subunit 3 [Auricularia subglabra TFB-10046 SS5] >gi|393235202|gb|EJD42759.1| dolichol-phosphate mannosyltransferase subunit 3 [Auricularia subglabra TFB-10046 SS5]) HSP 1 Score: 62.003 bits (149), Expect = 9.583e-10 Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 107 QPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDID 168
+P + +L P W+LVS G+Y+L ++G +++ F CPEA L++++ QAK DL +G D+D
Sbjct: 28 EPASLILPVLPWWLLVSFGSYSLWTLGWAMLSFRECPEAYEELTKEVEQAKQDLRRRGVDVD 89
BLAST of EWM23529.1 vs. NCBI_GenBank
Match: gi|330792411|ref|XP_003284282.1| (hypothetical protein DICPUDRAFT_86185 [Dictyostelium purpureum] >gi|325085735|gb|EGC39136.1| hypothetical protein DICPUDRAFT_86185 [Dictyostelium purpureum]) HSP 1 Score: 62.003 bits (149), Expect = 1.236e-9 Identity = 29/91 (31.87%), Postives = 52/91 (57.14%), Query Frame = 0
Query: 77 RWMGLLLLFTLCTAVWLMLYSDPLQSFHFTQPVTDVLETFPLWILVSLGAYALGSIGLSLMCFNTCPEAVVALSEDIRQAKADLWGKGFDI 167
R+ + L F AVW ++ + +Q + ++PV ++ PL+ LV G+Y+LG I +L+ + C EA +L ++I++AK L KG +
Sbjct: 3 RYQKVFLTFASLMAVWFLILIEKIQ-LNLSEPVQSIIPFLPLYALVVFGSYSLGVIAYNLLIMSDCKEAADSLYDEIKEAKESLRSKGMKL 92 The following BLAST results are available for this feature:
BLAST of EWM23529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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