EWM23535.1, cds7140 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|585104643|gb|EWM23535.1| (hypothetical protein Naga_100416g5 [Nannochloropsis gaditana]) HSP 1 Score: 737.258 bits (1902), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 Query: 1 MDKPSTSLHLAIPDPEEAAFLPVDVHVVPKRASHLPTSSHTSSTNGALAFGSVHPPRYLRAPKGEIDYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 356 MDKPSTSLHLAIPDPEEAAFLPVDVHVVPKRASHLPTSSHTSSTNGALAFGSVHPPRYLRAPKGEIDYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW Sbjct: 1 MDKPSTSLHLAIPDPEEAAFLPVDVHVVPKRASHLPTSSHTSSTNGALAFGSVHPPRYLRAPKGEIDYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 356
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|553181432|ref|XP_005853565.1| (hypothetical protein NGA_0494800 [Nannochloropsis gaditana CCMP526] >gi|422295494|gb|EKU22793.1| hypothetical protein NGA_0494800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0 Query: 94 MSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 356 MSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIK MWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW Sbjct: 1 MSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIK-MWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 262
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|299471422|emb|CBN79375.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.168 bits (300), Expect = 8.059e-27 Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 67 DYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKE 208 D MPD++LHR + F++ + S RW E + + C R YL Q+ K LN R++ SW+ M + RPR+R G Y L ++Y KKP++DM TE TPG IL V YYRY +F GR+ YAL + PP + V + ++ Sbjct: 294 DIVLTMPDDILHRTMLFLNPEDIFECRAVSSRWSFPGHENVYEGLCRRTYLAQSAKKMLNVKRWR-SWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFKFFGDGRVAYALTHEPPKDFVRMLQD 434
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|325179911|emb|CCA14313.1| (Fbox protein putative [Albugo laibachii Nc14]) HSP 1 Score: 108.612 bits (270), Expect = 3.565e-24 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = 0 Query: 72 MPDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQ----GSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWT-EITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFK 207 +P+ ++ +++ F+D DT + + + W + DE I + C RI+ Q K N +FQ +W ML RP VR NGFY+L SY KKP +MWT E+TPG++L+V YYRY F G L+YA+L+ PP EA+S+FK Sbjct: 5 LPEHLVTQLVLFLDEDTIGSCLCTCKHWNHVLNDETIFKELCRRIFPIQCK-KSANQKQFQLRRCKTWFEMLCRRPHVRYNGFYWLRISYYKKPEWNMWTPEVTPGSVLQVVYYRYFYFQRDGTLLYAMLFKPPKEAISIFK 145
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|224004852|ref|XP_002296077.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|209586109|gb|ACI64794.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 110.153 bits (274), Expect = 4.688e-23 Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 0 Query: 70 SAMPDEVLHRILTFVDIDTGVASTMSSQRW-RPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNG-FYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAH 212 +PDE+LH+ +F+ +D + S W R E + + CER+YL+Q+ K L+ +RF S++ ML++RPR+RT G Y L ++K +DMWTEI G ILE YYRYL F GR++YAL + P E + F H Sbjct: 238 CGLPDEILHKCFSFLPVDDYSPLALVSPHWSRFTRCESLYKTLCERVYLNQSKRKTLHVSRFGNSYRRMLESRPRIRTGGGLYVLKYQEVRKIQRDMWTEIPVGAILESVYYRYLYFFEDGRVMYALTHATPVEMIPRFSRMLLH 382
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|1210525790|dbj|GAX15396.1| (hypothetical protein FisN_8Lh308 [Fistulifera solaris]) HSP 1 Score: 104.375 bits (259), Expect = 9.160e-22 Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0 Query: 72 MPDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNG-FYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPP 199 +PD++LHR+ F+ +DT + S W+ E + CER+YL Q+ + L+ +RF S++ ML+ RPRVR G Y + IKK +DMWTEI G ILE YYRYL F GR++YAL P Sbjct: 111 LPDDLLHRVFDFLPVDTYATLALVSPHWKSFTRTEAAYRRLCERLYLQQSKKRTLHVSRFGNSYRTMLEKRPRVRAGGGVYVIKYKQIKKIQRDMWTEIPHGAILESIYYRYLYFQEDGRVIYALTTTAP 240
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|219115343|ref|XP_002178467.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410202|gb|EEC50132.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 104.76 bits (260), Expect = 1.079e-21 Identity = 54/137 (39.42%), Postives = 82/137 (59.85%), Query Frame = 0 Query: 72 MPDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNG-FYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLF 206 +PD++LH++ ++ +D ++ S W+ E + + CER+YL+Q+ + L+ +RF S++AML+ RPRVR G Y L + +KK +DMWTEI G +LE YYRYL F GR++YAL P E F Sbjct: 153 IPDDILHKVFEWLPVDAYGTLSLVSPHWKAFTRTEAVYKRLCERLYLNQSKRRALHVSRFGNSYRAMLELRPRVRAGGGIYVLKFARVKKIQRDMWTEIPVGAVLETVYYRYLYFQEDGRVLYALTAASPHEMFRRF 289
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|1210515337|dbj|GAX25789.1| (hypothetical protein FisN_8Hh308 [Fistulifera solaris]) HSP 1 Score: 104.375 bits (259), Expect = 1.343e-21 Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0 Query: 72 MPDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNG-FYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPP 199 +PD++LHR+ F+ +DT + S W+ E + CER+YL Q+ + L+ +RF S++ ML+ RPRVR G Y + IKK +DMWTEI G ILE YYRYL F GR++YAL P Sbjct: 136 LPDDLLHRVFDFLPVDTYATLALVSPHWKSFTRTEAAYRRLCERLYLQQSKKRTLHVSRFGNSYRTMLEKRPRVRAGGGVYVIKYKQIKKIQRDMWTEIPHGAILESIYYRYLYFQEDGRVIYALTTTAP 265
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|1072236027|gb|OEU20755.1| (hypothetical protein FRACYDRAFT_259673 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 102.834 bits (255), Expect = 1.971e-21 Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 0 Query: 73 PDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRT-NGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPE 201 P E+LHRI +++ +DT + S W+ E + + CER+YL+Q+ ++L+ RF GS++ ML+ RPRVR G Y + S IKK + MWTEI G +L YYRYL F GR++YAL PP + Sbjct: 82 PAEILHRIFSWLPVDTYGTMALVSTHWKFFTRTEAVYKRLCERLYLNQSKRRQLHVNRFDGSYRRMLEIRPRVRAAGGCYVMKYSQIKKIERTMWTEIPIGAVLRTEYYRYLYFQEDGRVLYALSCSPPKD 212
BLAST of EWM23535.1 vs. NCBI_GenBank
Match: gi|397603213|gb|EJK58371.1| (hypothetical protein THAOC_21510 [Thalassiosira oceanica]) HSP 1 Score: 103.605 bits (257), Expect = 7.550e-21 Identity = 73/259 (28.19%), Postives = 112/259 (43.24%), Query Frame = 0 Query: 72 MPDEVLHRILTFVDIDTGVASTMSSQRWRPLF-DERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNG-FYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEYEAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGGLEGGREGGHEGGRGNFTALMMEEHTS 328 +PDE+L + ++ +D + S W+ + + + CER+YL Q+ K LN A+F S++ ML+ RPRVRT G Y L + + +DMWTEI G +LE YYRYL F GR++YAL + P E V F + H GWG SK K G F I + + + + + FQ ++ + +E + RG +T++ +E H S Sbjct: 237 IPDEILEKCFAYLPVDNFANLALVSPHWKRFTRSDAVYKTLCERVYLIQSKRKALNVAKFGNSYRRMLEVRPRVRTGGGLYVLKYQKVIQIQRDMWTEIPVGAVLESIYYRYLYFFEDGRVLYALTHATPGEMVPRFHKMLLH-------------------GWG---------------------------SKDKWGVWGRFSIKREKIRVWAKQDWHEVCFQLRV------IRSNKELHYGDDRGRWTSMELERHMS 443 The following BLAST results are available for this feature:
BLAST of EWM23535.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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