EWM23532.1, cds7139 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|585104640|gb|EWM23532.1| (Thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 481.871 bits (1239), Expect = 3.229e-172 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MVFVPMDSLFHKRGLHRIHFPHALTRLLIPFLERRQGLFCFNRSMTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK 235
MVFVPMDSLFHKRGLHRIHFPHALTRLLIPFLERRQGLFCFNRSMTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK
Sbjct: 1 MVFVPMDSLFHKRGLHRIHFPHALTRLLIPFLERRQGLFCFNRSMTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK 235
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|553181438|ref|XP_005853566.1| (thioredoxin 1 [Nannochloropsis gaditana CCMP526] >gi|422295495|gb|EKU22794.1| thioredoxin 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 390.193 bits (1001), Expect = 1.637e-136 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK 235
MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK
Sbjct: 1 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAVVKGEVRETNEENKKKK 191
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|635367899|emb|CCI43937.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 111.694 bits (278), Expect = 3.285e-27 Identity = 67/195 (34.36%), Postives = 95/195 (48.72%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQY-DACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAV------VKGEVRETNEENK 232
MT CIGP+C+P AL PFLF++ + G W K +VL E P + ++HI E + ++ G +V+DFTA WCGPCRTI P F E S +Y A F VD+DE +A V +MPTF L G Q +E+R G ++ LE ++ V GE +N++ +
Sbjct: 1 MTTFCIGPVCVPAYALFPFLFLVLQWGWDWIKKHVLGMHDQ-----TEFP-----------NSRVIHIKSKQEWENLLQKHKYTGRTLVVDFTASWCGPCRTIKPFFHEQSVKYPSALFATVDVDEMQQIAKESGVNAMPTF-HLYKNGQQCDEIR--GADRAGLEQCIRKHYVKVDLPEEMSAGEAEASNKKQQ 176
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|669145486|ref|XP_008608305.1| (thioredoxin 1 [Saprolegnia diclina VS20] >gi|530739736|gb|EQC37978.1| thioredoxin 1 [Saprolegnia diclina VS20]) HSP 1 Score: 110.538 bits (275), Expect = 9.126e-27 Identity = 66/175 (37.71%), Postives = 96/175 (54.86%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPA-----VVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVK 213
MT ICIGPLC+P++A++PFL L AW + ++ A P + +RK V SIV + A + + + + PV++DFTA WCGPC+ IAP F+ LS+QY + F K+D+D DD+A T V +MPTF + + G + +E G N KL LV+
Sbjct: 1 MTCICIGPLCLPMEAVLPFLLALLYKAWAWLTGSAAPQVTATASCCAAEPGSAGADGSQLRQRKGVS-SIVAVHTRAEWDAL----LASSRPVIVDFTATWCGPCKKIAPTFDALSEQYPSLMFFKIDVDACDDIAATCGVSAMPTF-HVYVSGRKQDE--LCGANPSKLTALVE 167
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|325190141|emb|CCA24622.1| (thioredoxin Htype putative [Albugo laibachii Nc14]) HSP 1 Score: 104.375 bits (259), Expect = 2.675e-24 Identity = 60/176 (34.09%), Postives = 86/176 (48.86%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYD-ACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAMCAAV 219
MT CIGP+C+P AL P L+ + W K N L + P + ++HI + ++ G +V+DFTA WCGPCRTI P F E S +Y A FV VD+DE +A V +MPTF F + G + +E+R G ++ +LE +K + V
Sbjct: 1 MTTFCIGPVCVPAYALFPLLYFFLQWSWDWIKKNALGM-----NDQTDFP-----------NSRVIHIKSKEDWGNVLQQHKEIGRTLVVDFTASWCGPCRTIKPFFHEQSVKYPCAMFVTVDVDELKQIAKESGVNAMPTFQFYKD-GKRCDEIR--GADRARLEQCIKNLYVEV 157
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|568047712|gb|ETM44785.1| (thioredoxin [Phytophthora parasitica] >gi|568047713|gb|ETM44786.1| thioredoxin, variant [Phytophthora parasitica]) HSP 1 Score: 106.301 bits (264), Expect = 6.127e-24 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYD-ACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVK 213
MT ICIG CIPL AL+PF ++ + WF+ NVL +++ + E + ++H+T + + + VV+DF+A WCGPCR I+P++ ELS +Y F+KVD+DE V+ V +MPTF F R G + +E+R G +K LE L++
Sbjct: 1 MTTICIGGFCIPLYALLPFALMMLQGFWNWFRKNVL---GQDDEKIPE-------------NTRVIHVTSELQFKELLGKGKATKRSVVVDFSATWCGPCRYISPVYHELSAKYPCTIFLKVDVDELKSVSRGCGVTAMPTFQFFR-GGVKCDEMR--GADKNGLEALIQ 151 HSP 2 Score: 71.2478 bits (173), Expect = 5.779e-11 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 107 PSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLV 212
P + +T E++ ++ + +V+DF A WC PC IAPLFEELS ++ A F +VD+DE + VA + V S+P+F + G ++E+ SG + LE +V
Sbjct: 187 PQVTTVTSEEQWEKLMQQNQESNKALVVDFWATWCKPCVEIAPLFEELSGRFPAALFARVDVDELESVAEDFNVLSLPSFKVFK-GGKVVDEL--SGAIRSALESMV 290
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|675169171|ref|XP_008893470.1| (thioredoxin [Phytophthora parasitica INRA-310] >gi|568107077|gb|ETN21707.1| thioredoxin [Phytophthora parasitica INRA-310] >gi|570325635|gb|ETO73583.1| thioredoxin [Phytophthora parasitica P1976] >gi|570982881|gb|ETP42836.1| thioredoxin [Phytophthora parasitica P10297]) HSP 1 Score: 106.301 bits (264), Expect = 6.191e-24 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYD-ACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVK 213
MT ICIG CIPL AL+PF ++ + WF+ NVL +++ + E + ++H+T + + + VV+DF+A WCGPCR I+P++ ELS +Y F+KVD+DE V+ V +MPTF F R G + +E+R G +K LE L++
Sbjct: 1 MTTICIGGFCIPLYALLPFALMMLQGFWNWFRKNVL---GQDDEKIPE-------------NTRVIHVTSELQFKELLGKGKATKRSVVVDFSATWCGPCRYISPVYHELSAKYPCTIFLKVDVDELKSVSRGCGVTAMPTFQFFR-GGVKCDEMR--GADKNGLEALIQ 151 HSP 2 Score: 72.0182 bits (175), Expect = 3.048e-11 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 107 PSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLV 212
P + +T E++ ++ + +V+DF A WC PC IAPLFEELS ++ A F +VD+DE + VA + V S+P+F + G ++E+ SG + LE +V
Sbjct: 187 PQVTTVTSEEQWEKLMQQNQESNKALVVDFWATWCKPCVEIAPLFEELSGRFPAAVFARVDVDELESVAEDFNVSSLPSFKVFK-GGKVVDEL--SGAIRSALESMV 290
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|567988074|gb|ETL38358.1| (thioredoxin [Phytophthora parasitica] >gi|570949509|gb|ETP14766.1| thioredoxin [Phytophthora parasitica CJ01A1]) HSP 1 Score: 106.301 bits (264), Expect = 6.388e-24 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYD-ACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVK 213
MT ICIG CIPL AL+PF ++ + WF+ NVL +++ + E + ++H+T + + + VV+DF+A WCGPCR I+P++ ELS +Y F+KVD+DE V+ V +MPTF F R G + +E+R G +K LE L++
Sbjct: 1 MTTICIGGFCIPLYALLPFALMMLQGFWNWFRKNVL---GQDDEKIPE-------------NTRVIHVTSELQFKELLGKGKATKRSVVVDFSATWCGPCRYISPVYHELSAKYPCTIFLKVDVDELKSVSRGCGVTAMPTFQFFR-GGVKCDEMR--GADKNGLEALIQ 151 HSP 2 Score: 72.0182 bits (175), Expect = 2.988e-11 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 107 PSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLV 212
P + +T E++ ++ + +V+DF A WC PC IAPLFEELS ++ A F +VD+DE + VA + V S+P+F + G ++E+ SG + LE +V
Sbjct: 187 PQVTTVTSEEQWEKLMQQNQESNKALVVDFWATWCKPCVEIAPLFEELSGRFPAALFARVDVDELESVAEDFNVSSLPSFKVFK-GGKVVDEL--SGAIRSALESMV 290
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|566022027|gb|ETI44938.1| (hypothetical protein F443_10382 [Phytophthora parasitica P1569] >gi|567959367|gb|ETK84940.1| hypothetical protein L915_10157 [Phytophthora parasitica]) HSP 1 Score: 105.916 bits (263), Expect = 9.598e-24 Identity = 61/170 (35.88%), Postives = 93/170 (54.71%), Query Frame = 0
Query: 45 MTNICIGPLCIPLQALVPFLFILFRIGVAWFKTNVLKTLSPEEKALAELPPPPAVVERKWVDPSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVK 213
MT ICIG CIPL AL+PF ++ + WF+ NVL +++ + E + ++H+T + + + VV+DF+A WCGPCR I+P++ ELS +Y F+KVD+DE V+ V +MPTF F R G + +E+R G +K LE L++
Sbjct: 1 MTTICIGGFCIPLYALLPFALMMLQGFWNWFRKNVL---GQDDEKIPE-------------NTRVIHVTSELQFKELLGKGKATKRSVVVDFSATWCGPCRYISPVYHELSAKYPCTIFLKVDVDELKSVSRGCGVTAMPTFQFFR-GGVKCDEMR--GADKNGLEALIQ 151 HSP 2 Score: 70.4774 bits (171), Expect = 1.160e-10 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 107 PSIVHITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQYDAC-FVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLV 212
P + +T E++ ++ + +V+DF A WC PC IAP FEELS ++ A FV+VD+DE + + + V S+P F + G+ ++E+ SG + LEG+V
Sbjct: 187 PQVTTVTSEEQWEKLMQQNQESNKALVVDFWATWCKPCVEIAPFFEELSCRFPAAVFVRVDVDEVESLTDEFDVSSLPCFKVFK-GGEAVDEL--SGAIRGALEGMV 290
BLAST of EWM23532.1 vs. NCBI_GenBank
Match: gi|1101383775|dbj|GAU99854.1| (hypothetical protein RvY_10794 [Ramazzottius varieornatus]) HSP 1 Score: 99.7525 bits (247), Expect = 2.737e-23 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 112 ITDAAHLERIKREAMGAGVPVVIDFTAGWCGPCRTIAPLFEELSQQY-DACFVKVDIDEADDVALTYKVRSMPTFVFLRIVGDQIEEVRFSGCNKIKLEGLVKAM 215
+TD + LE+I ++A G V+IDF+A WCGPC+ I P + LS QY DA F+ VD+D+A+++A Y V SMPTFVF++ G +E RFSG N KLE ++ +
Sbjct: 10 VTDKSDLEKILKDA--GGKLVIIDFSAKWCGPCKNIHPKYTALSSQYSDAVFLTVDVDDAEEIAAAYDVSSMPTFVFVK-NGKSVE--RFSGANPTKLEEMINKL 109 The following BLAST results are available for this feature:
BLAST of EWM23532.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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