EWM23546.1, cds7127 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|585104662|gb|EWM23546.1| (sulfide-quinone oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 186.422 bits (472), Expect = 6.653e-60 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE
Sbjct: 1 MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|568447083|ref|XP_006458161.1| (hypothetical protein AGABI2DRAFT_190518 [Agaricus bisporus var. bisporus H97] >gi|426200191|gb|EKV50115.1| hypothetical protein AGABI2DRAFT_190518 [Agaricus bisporus var. bisporus H97]) HSP 1 Score: 109.768 bits (273), Expect = 2.172e-26 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
G+ A YDGYTSCPL+TGY LLLAEFKYG E ETFG DQ + R F LKK +FP+AYW+ ++G+WFGTRG+ PS+
Sbjct: 359 GKVANARYDGYTSCPLLTGYGKLLLAEFKYGLEPKETFGMFTDQGKSRLPFYWLKKDLFPYAYWKYMVKGQWFGTRGLFRPSY 441
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|597968179|ref|XP_007326660.1| (hypothetical protein AGABI1DRAFT_111296 [Agaricus bisporus var. burnettii JB137-S8] >gi|409082358|gb|EKM82716.1| hypothetical protein AGABI1DRAFT_111296 [Agaricus bisporus var. burnettii JB137-S8]) HSP 1 Score: 109.768 bits (273), Expect = 2.195e-26 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
G+ A YDGYTSCPL+TGY LLLAEFKYG E ETFG DQ + R F LKK +FP+AYW+ ++G+WFGTRG+ PS+
Sbjct: 359 GKVANARYDGYTSCPLLTGYGKLLLAEFKYGLEPKETFGMFTDQGKSRLPFYWLKKDLFPYAYWKYMVKGQWFGTRGLFRPSY 441
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1024099763|gb|KZV91072.1| (FAD/NAD(P)-binding domain-containing protein [Exidia glandulosa HHB12029]) HSP 1 Score: 107.457 bits (267), Expect = 1.227e-25 Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0
Query: 7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRV--IDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
G+ TAVYDGYTSCPL+TGY SL+LAEFKYG E ETF + IDQ PR AF +KKH+FP+AYW+L +G W G RG+ P +
Sbjct: 362 GDVGTAVYDGYTSCPLLTGYDSLMLAEFKYGLEPKETFKSMLGIDQVVPRKAFFNMKKHLFPWAYWKLMTKGLWHGPRGIFPQKY 446
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1018858941|dbj|GAT58720.1| (predicted protein [Mycena chlorophos]) HSP 1 Score: 107.457 bits (267), Expect = 1.370e-25 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0
Query: 4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
V G+ +A+YDGYTSCPL+TGY+ L+LAEFKYG E ETF DQ++P F LKK VFP+AYW ++G+WFGT G I P F
Sbjct: 348 VSSGKLSSAIYDGYTSCPLLTGYNELMLAEFKYGLEPKETFAAQFDQSKPNRLFYHLKKDVFPWAYWNYMVQGKWFGTNGPIRPKF 433
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1027071914|ref|XP_016639339.1| (hypothetical protein SAPIO_CDS9428 [Scedosporium apiospermum] >gi|666862719|gb|KEZ39540.1| hypothetical protein SAPIO_CDS9428 [Scedosporium apiospermum]) HSP 1 Score: 107.457 bits (267), Expect = 1.552e-25 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query: 4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVI-DQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
V+ G++P A YDGY SCPL+TG++ L+L EFKYGG ETF V+ DQAEPR F LKK FPF YW+ F++G W+G + P FE
Sbjct: 359 VINGKQPKAEYDGYASCPLLTGHNELMLCEFKYGGVPQETFANVLGDQAEPRRVFYHLKKDFFPFVYWQGFVKGTWYGPKAFNAPKFE 446
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|242822088|ref|XP_002487812.1| (conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] >gi|218712733|gb|EED12158.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]) HSP 1 Score: 107.457 bits (267), Expect = 1.951e-25 Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query: 4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRV--IDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVI 85
VM G++P A YDGYTSCPL+T Y +LLAEFKYGGE ETFGR+ IDQAEPR AF +KK FP+ Y++ ++G W G +G I
Sbjct: 428 VMDGKEPVATYDGYTSCPLLTQYGKVLLAEFKYGGEPKETFGRLFGIDQAEPRRAFYYMKKDFFPWVYYKSMVKGTWAGPKGFI 511
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|685953680|ref|XP_009270505.1| (hypothetical protein J056_003533 [Wallemia ichthyophaga EXF-994] >gi|505754283|gb|EOQ98654.1| hypothetical protein J056_003533 [Wallemia ichthyophaga EXF-994]) HSP 1 Score: 107.457 bits (267), Expect = 3.056e-25 Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 0
Query: 3 KVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVI-DQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
K M G+ AVYDGY SCPL+TG+ LLLAEFKYGG ETF ++ Q +P F LKK +FP YW F++G WFGTRG I P+F+
Sbjct: 543 KTMEGKPLNAVYDGYASCPLLTGHGELLLAEFKYGGVPKETFAPILGSQDKPNRLFYHLKKDIFPPVYWNYFVKGNWFGTRGPIAPNFD 631
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|169853240|ref|XP_001833301.1| (sulfide-quinone oxidoreductase [Coprinopsis cinerea okayama7#130] >gi|116505679|gb|EAU88574.1| sulfide-quinone oxidoreductase [Coprinopsis cinerea okayama7#130]) HSP 1 Score: 106.301 bits (264), Expect = 3.704e-25 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0
Query: 11 TAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
+A YDGYTSCPL+T Y L+LAEFKYG E ETFG ++DQ++ R F LKK VFP AYW ++G+WFG +G I P++
Sbjct: 370 SARYDGYTSCPLLTAYGELMLAEFKYGLEPKETFGALVDQSKSRRVFYHLKKDVFPAAYWNYMVQGKWFGNKGTIRPTY 448
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1012968590|gb|KYQ43333.1| (Sulfide:quinone oxidoreductase, mitochondrial [Hypsizygus marmoreus]) HSP 1 Score: 105.916 bits (263), Expect = 4.680e-25 Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
G +A YDGYTSCPL+TGY L+LAEFKYG E E+F + +QA+ F LKK VFP AYW L+G+WFGT G I P+F+
Sbjct: 366 GRVSSATYDGYTSCPLLTGYGELMLAEFKYGLEPKESFSAIFNQAKSNRFFYHLKKDVFPLAYWNFMLKGKWFGTNGPIRPTFK 449 The following BLAST results are available for this feature:
BLAST of EWM23546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|