EWM23546.1, cds7127 (CDS) Nannochloropsis gaditana

Overview
NameEWM23546.1
Unique Namecds7127
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:548981..549052 -
Alignment locationCM002470.1:548661..548861 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23546.1
Productsulfide-quinone oxidoreductase
Orig transcript idgnl|cribi|Naga_101203g1.3193.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:548981..549052 -
CM002470.1supercontigCM002470.1:548661..548861 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|585104662|gb|EWM23546.1| (sulfide-quinone oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 186.422 bits (472), Expect = 6.653e-60
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:    1 MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
            MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE
Sbjct:    1 MGKVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|568447083|ref|XP_006458161.1| (hypothetical protein AGABI2DRAFT_190518 [Agaricus bisporus var. bisporus H97] >gi|426200191|gb|EKV50115.1| hypothetical protein AGABI2DRAFT_190518 [Agaricus bisporus var. bisporus H97])

HSP 1 Score: 109.768 bits (273), Expect = 2.172e-26
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
            G+   A YDGYTSCPL+TGY  LLLAEFKYG E  ETFG   DQ + R  F  LKK +FP+AYW+  ++G+WFGTRG+  PS+
Sbjct:  359 GKVANARYDGYTSCPLLTGYGKLLLAEFKYGLEPKETFGMFTDQGKSRLPFYWLKKDLFPYAYWKYMVKGQWFGTRGLFRPSY 441          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|597968179|ref|XP_007326660.1| (hypothetical protein AGABI1DRAFT_111296 [Agaricus bisporus var. burnettii JB137-S8] >gi|409082358|gb|EKM82716.1| hypothetical protein AGABI1DRAFT_111296 [Agaricus bisporus var. burnettii JB137-S8])

HSP 1 Score: 109.768 bits (273), Expect = 2.195e-26
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
            G+   A YDGYTSCPL+TGY  LLLAEFKYG E  ETFG   DQ + R  F  LKK +FP+AYW+  ++G+WFGTRG+  PS+
Sbjct:  359 GKVANARYDGYTSCPLLTGYGKLLLAEFKYGLEPKETFGMFTDQGKSRLPFYWLKKDLFPYAYWKYMVKGQWFGTRGLFRPSY 441          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1024099763|gb|KZV91072.1| (FAD/NAD(P)-binding domain-containing protein [Exidia glandulosa HHB12029])

HSP 1 Score: 107.457 bits (267), Expect = 1.227e-25
Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRV--IDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
            G+  TAVYDGYTSCPL+TGY SL+LAEFKYG E  ETF  +  IDQ  PR AF  +KKH+FP+AYW+L  +G W G RG+ P  +
Sbjct:  362 GDVGTAVYDGYTSCPLLTGYDSLMLAEFKYGLEPKETFKSMLGIDQVVPRKAFFNMKKHLFPWAYWKLMTKGLWHGPRGIFPQKY 446          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1018858941|dbj|GAT58720.1| (predicted protein [Mycena chlorophos])

HSP 1 Score: 107.457 bits (267), Expect = 1.370e-25
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
            V  G+  +A+YDGYTSCPL+TGY+ L+LAEFKYG E  ETF    DQ++P   F  LKK VFP+AYW   ++G+WFGT G I P F
Sbjct:  348 VSSGKLSSAIYDGYTSCPLLTGYNELMLAEFKYGLEPKETFAAQFDQSKPNRLFYHLKKDVFPWAYWNYMVQGKWFGTNGPIRPKF 433          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1027071914|ref|XP_016639339.1| (hypothetical protein SAPIO_CDS9428 [Scedosporium apiospermum] >gi|666862719|gb|KEZ39540.1| hypothetical protein SAPIO_CDS9428 [Scedosporium apiospermum])

HSP 1 Score: 107.457 bits (267), Expect = 1.552e-25
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVI-DQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
            V+ G++P A YDGY SCPL+TG++ L+L EFKYGG   ETF  V+ DQAEPR  F  LKK  FPF YW+ F++G W+G +    P FE
Sbjct:  359 VINGKQPKAEYDGYASCPLLTGHNELMLCEFKYGGVPQETFANVLGDQAEPRRVFYHLKKDFFPFVYWQGFVKGTWYGPKAFNAPKFE 446          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|242822088|ref|XP_002487812.1| (conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] >gi|218712733|gb|EED12158.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500])

HSP 1 Score: 107.457 bits (267), Expect = 1.951e-25
Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    4 VMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRV--IDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVI 85
            VM G++P A YDGYTSCPL+T Y  +LLAEFKYGGE  ETFGR+  IDQAEPR AF  +KK  FP+ Y++  ++G W G +G I
Sbjct:  428 VMDGKEPVATYDGYTSCPLLTQYGKVLLAEFKYGGEPKETFGRLFGIDQAEPRRAFYYMKKDFFPWVYYKSMVKGTWAGPKGFI 511          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|685953680|ref|XP_009270505.1| (hypothetical protein J056_003533 [Wallemia ichthyophaga EXF-994] >gi|505754283|gb|EOQ98654.1| hypothetical protein J056_003533 [Wallemia ichthyophaga EXF-994])

HSP 1 Score: 107.457 bits (267), Expect = 3.056e-25
Identity = 49/89 (55.06%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    3 KVMRGEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVI-DQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
            K M G+   AVYDGY SCPL+TG+  LLLAEFKYGG   ETF  ++  Q +P   F  LKK +FP  YW  F++G WFGTRG I P+F+
Sbjct:  543 KTMEGKPLNAVYDGYASCPLLTGHGELLLAEFKYGGVPKETFAPILGSQDKPNRLFYHLKKDIFPPVYWNYFVKGNWFGTRGPIAPNFD 631          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|169853240|ref|XP_001833301.1| (sulfide-quinone oxidoreductase [Coprinopsis cinerea okayama7#130] >gi|116505679|gb|EAU88574.1| sulfide-quinone oxidoreductase [Coprinopsis cinerea okayama7#130])

HSP 1 Score: 106.301 bits (264), Expect = 3.704e-25
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 0
Query:   11 TAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSF 89
            +A YDGYTSCPL+T Y  L+LAEFKYG E  ETFG ++DQ++ R  F  LKK VFP AYW   ++G+WFG +G I P++
Sbjct:  370 SARYDGYTSCPLLTAYGELMLAEFKYGLEPKETFGALVDQSKSRRVFYHLKKDVFPAAYWNYMVQGKWFGNKGTIRPTY 448          
BLAST of EWM23546.1 vs. NCBI_GenBank
Match: gi|1012968590|gb|KYQ43333.1| (Sulfide:quinone oxidoreductase, mitochondrial [Hypsizygus marmoreus])

HSP 1 Score: 105.916 bits (263), Expect = 4.680e-25
Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    7 GEKPTAVYDGYTSCPLITGYSSLLLAEFKYGGEVAETFGRVIDQAEPRWAFLQLKKHVFPFAYWELFLRGRWFGTRGVIPPSFE 90
            G   +A YDGYTSCPL+TGY  L+LAEFKYG E  E+F  + +QA+    F  LKK VFP AYW   L+G+WFGT G I P+F+
Sbjct:  366 GRVSSATYDGYTSCPLLTGYGELMLAEFKYGLEPKESFSAIFNQAKSNRFFYHLKKDVFPLAYWNFMLKGKWFGTNGPIRPTFK 449          
The following BLAST results are available for this feature:
BLAST of EWM23546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104662|gb|EWM23546.1|6.653e-60100.00sulfide-quinone oxidoreductase [Nannochloropsis ga... [more]
gi|568447083|ref|XP_006458161.1|2.172e-2659.04hypothetical protein AGABI2DRAFT_190518 [Agaricus ... [more]
gi|597968179|ref|XP_007326660.1|2.195e-2659.04hypothetical protein AGABI1DRAFT_111296 [Agaricus ... [more]
gi|1024099763|gb|KZV91072.1|1.227e-2560.00FAD/NAD(P)-binding domain-containing protein [Exid... [more]
gi|1018858941|dbj|GAT58720.1|1.370e-2556.98predicted protein [Mycena chlorophos][more]
gi|1027071914|ref|XP_016639339.1|1.552e-2554.55hypothetical protein SAPIO_CDS9428 [Scedosporium a... [more]
gi|242822088|ref|XP_002487812.1|1.951e-2559.52conserved hypothetical protein [Talaromyces stipit... [more]
gi|685953680|ref|XP_009270505.1|3.056e-2555.06hypothetical protein J056_003533 [Wallemia ichthyo... [more]
gi|169853240|ref|XP_001833301.1|3.704e-2556.96sulfide-quinone oxidoreductase [Coprinopsis cinere... [more]
gi|1012968590|gb|KYQ43333.1|4.680e-2555.95Sulfide:quinone oxidoreductase, mitochondrial [Hyp... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7144rna7144Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications