EWM23548.1, cds7125 (CDS) Nannochloropsis gaditana

Overview
NameEWM23548.1
Unique Namecds7125
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:546138..546222 -
Alignment locationCM002470.1:545882..545942 -
Alignment locationCM002470.1:545476..545566 -
Alignment locationCM002470.1:545150..545269 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23548.1
ProductHeat shock protein DnaJ, cysteine-rich domain protein
Orig transcript idgnl|cribi|Naga_100689g1.8725.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:546138..546222 -
CM002470.1supercontigCM002470.1:545882..545942 -
CM002470.1supercontigCM002470.1:545476..545566 -
CM002470.1supercontigCM002470.1:545150..545269 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0051082unfolded protein binding
GO:0031072heat shock protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001305HSP_DnaJ_Cys-rich_dom
Homology
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BLAST of EWM23548.1 vs. NCBI_GenBank
Match: gi|585104665|gb|EWM23548.1| (Heat shock protein DnaJ, cysteine-rich domain protein [Nannochloropsis gaditana])

HSP 1 Score: 241.121 bits (614), Expect = 1.293e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:    1 MVVDVYRIKKKKGAKGQEEDGNYMQRFSGDWETTFKQGSKWSVPDTKAGGMALRQSKPDGGAVCPTCKGGGKNPCFNCKGKGVLVSGQRSLTCYICKGEGMYFCADCQATGMISRKKV 118
            MVVDVYRIKKKKGAKGQEEDGNYMQRFSGDWETTFKQGSKWSVPDTKAGGMALRQSKPDGGAVCPTCKGGGKNPCFNCKGKGVLVSGQRSLTCYICKGEGMYFCADCQATGMISRKKV
Sbjct:    1 MVVDVYRIKKKKGAKGQEEDGNYMQRFSGDWETTFKQGSKWSVPDTKAGGMALRQSKPDGGAVCPTCKGGGKNPCFNCKGKGVLVSGQRSLTCYICKGEGMYFCADCQATGMISRKKV 118
The following BLAST results are available for this feature:
BLAST of EWM23548.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104665|gb|EWM23548.1|1.293e-80100.00Heat shock protein DnaJ, cysteine-rich domain prot... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7142rna7142Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications