EWM23554.1, cds7117 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|585104675|gb|EWM23554.1| (flavodoxin family protein [Nannochloropsis gaditana]) HSP 1 Score: 336.65 bits (862), Expect = 4.389e-117 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG
Sbjct: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|585104676|gb|EWM23555.1| (flavodoxin family protein [Nannochloropsis gaditana]) HSP 1 Score: 217.624 bits (553), Expect = 7.549e-69 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query: 60 GEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
GEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG
Sbjct: 145 GEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 HSP 2 Score: 124.405 bits (311), Expect = 3.115e-32 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60
MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG
Sbjct: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|970658684|gb|KUF96422.1| (sulfite oxidase [Phytophthora nicotianae]) HSP 1 Score: 196.823 bits (499), Expect = 1.378e-56 Identity = 94/161 (58.39%), Postives = 114/161 (70.81%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D Y ELI +G+PD IE+K VTYCGKS S L M+ NVPWH EVR F A+ DR G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+LI + +DGT F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG
Sbjct: 491 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTMK-NVPWHEEVRGFCSALCDRVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELIATYYEDGTPFTADDYTAPTPYWALYDSKEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 649
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|675197091|ref|XP_008907430.1| (hypothetical protein PPTG_13478 [Phytophthora parasitica INRA-310] >gi|566020899|gb|ETI43810.1| hypothetical protein F443_11402 [Phytophthora parasitica P1569] >gi|567958283|gb|ETK83875.1| hypothetical protein L915_11092 [Phytophthora parasitica] >gi|567986975|gb|ETL37290.1| hypothetical protein L916_10990 [Phytophthora parasitica] >gi|568016253|gb|ETL90430.1| hypothetical protein L917_10899 [Phytophthora parasitica] >gi|568046629|gb|ETM43734.1| hypothetical protein L914_10925 [Phytophthora parasitica] >gi|568092245|gb|ETN07054.1| hypothetical protein PPTG_13478 [Phytophthora parasitica INRA-310] >gi|570324538|gb|ETO72486.1| hypothetical protein F444_11472 [Phytophthora parasitica P1976] >gi|570948364|gb|ETP13621.1| hypothetical protein F441_11319 [Phytophthora parasitica CJ01A1] >gi|570981210|gb|ETP41684.1| hypothetical protein F442_11287 [Phytophthora parasitica P10297] >gi|970616723|gb|KUF64869.1| S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Phytophthora nicotianae]) HSP 1 Score: 196.823 bits (499), Expect = 2.385e-56 Identity = 94/161 (58.39%), Postives = 114/161 (70.81%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D Y ELI +G+PD IE+K VTYCGKS S L M+ NVPWH EVR F A+ DR G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+LI + +DGT F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG
Sbjct: 551 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTMK-NVPWHEEVRGFCSALCDRVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELIATYYEDGTPFTADDYTAPTPYWALYDSKEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 709
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|953502925|emb|CEG35693.1| (trna wybutosine-synthesizing protein 1 homolog [Plasmopara halstedii]) HSP 1 Score: 196.052 bits (497), Expect = 2.427e-56 Identity = 92/161 (57.14%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D Y ELI +G PD IE+K VTYCGKS S L M+ NVPWH EVR+F A+ DR G+Y +EHAHS C L+A+KK FYR G W+TWIDY +FH+LI ++ +DGT F A +Y A TP WAL + E+GFDP +TRFRR+K G V + Y T+SGCG
Sbjct: 497 MEELDNYAELINIGHPDFIEVKAVTYCGKSDGSNLTMQ-NVPWHEEVRSFCSALCDRVSGDYALASEHAHSNCVLIAKKK-FYREGVWHTWIDYDRFHELIAKYYEDGTLFTADEYIAPTPHWALYDSKEQGFDPAETRFRRSKDGKVVKFAYLSTESGCG 655
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|301117924|ref|XP_002906690.1| (tRNA wybutosine-synthesizing protein, putative [Phytophthora infestans T30-4] >gi|262108039|gb|EEY66091.1| tRNA wybutosine-synthesizing protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 195.282 bits (495), Expect = 9.419e-56 Identity = 92/161 (57.14%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D Y ELI +G+PD IE+K VTYCGKS S L M+ NVPWH EVR F A+ DR G+Y +EH+HS C L+A+KK F R G W+TWIDY +FH+LI ++ +DGT F A DY A TP WA+ + E+GFDPV+TRFRR K G V E Y+ T+SGCG
Sbjct: 551 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTMK-NVPWHEEVRGFCSALCDRVSGDYALASEHSHSNCVLIAKKK-FCREGVWHTWIDYERFHELIAKYYEDGTPFTADDYTAPTPYWAVYDSKEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 709
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|1214712839|gb|OWZ23760.1| (TRNA wybutosine-synthesizing protein [Phytophthora megakarya]) HSP 1 Score: 194.512 bits (493), Expect = 2.343e-55 Identity = 91/161 (56.52%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D Y ELI +G+PD IE+K VTYCGKS S L M+ NVPWH EVR F A+ +R G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+L+ ++ +DG+ F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG
Sbjct: 553 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTMK-NVPWHEEVRGFCSALCERVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELVAKYYEDGSTFTADDYTAPTPHWALYDSQEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 711
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|698787402|ref|XP_009826733.1| (hypothetical protein H257_04059 [Aphanomyces astaci] >gi|574117822|gb|ETV83303.1| hypothetical protein H257_04059 [Aphanomyces astaci]) HSP 1 Score: 193.356 bits (490), Expect = 7.976e-55 Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D YVELI +G+PDLIEIK VTYCGKS S L M+ NVP+H EVR F + + + G YE EHAHS C L+A+ K F G W+TWIDY KFH LI+ + KDGT F DY A TPAWA+ APE GFDP++TRFRR K G V E+ Y TDSGCG
Sbjct: 572 MKELDNYVELIHLGEPDLIEIKAVTYCGKSDASDLTMQ-NVPYHQEVRDFCELLCAKLGGGYELATEHAHSNCVLVAKTK-FKIDGHWHTWIDYDKFHTLIQAYYKDGTPFTTMDYIAPTPAWAVYNAPEAGFDPIETRFRRTKEGKVVEIEYTATDSGCG 730
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|1173954857|gb|OQS01994.1| (tRNA wybutosine-synthesizing protein [Thraustotheca clavata]) HSP 1 Score: 192.2 bits (487), Expect = 1.247e-54 Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D YVELI +G+PDLIE+K VTYCGKS S L ++ +VP+H EVR+F + + + +GEY EHAHS C L+A K F G+W+TWIDY KFH L++++ KDGT F DY A TP WA+ APE GFDPV+TRFRR K G V E+ Y TDSGCG
Sbjct: 535 MKEIDNYVELIQIGQPDLIEVKAVTYCGKSDASDLTIK-HVPYHEEVRSFCELLCSKLDGEYGLATEHAHSNCVLIA-KTQFKIEGQWHTWIDYDKFHQLVQQYYKDGTTFTTMDYIARTPHWAVYDAPEHGFDPVETRFRRTKEGKVVEIEYTATDSGCG 693
BLAST of EWM23554.1 vs. NCBI_GenBank
Match: gi|1173935368|gb|OQR86498.1| (tRNA wybutosine-synthesizing protein [Achlya hypogyna]) HSP 1 Score: 192.2 bits (487), Expect = 1.339e-54 Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 0
Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161
M E+D YVELI +G+PDLIEIK VTYCGKS S L M+ NVP+H EVRAF + + + G Y EHAHS C LLA K F G W+TWIDY KFH L+++F KDGT F DY A TP WA+ APE GFDP++TRFRR K G V E+ Y TDSGCG
Sbjct: 540 MKEIDNYVELIEIGQPDLIEIKAVTYCGKSDASDLTMK-NVPYHEEVRAFCELLCAKLGGAYGLATEHAHSNCVLLA-KTQFKIDGHWHTWIDYDKFHALVQQFYKDGTPFSTMDYIAPTPHWAVYDAPEAGFDPIETRFRRTKEGKVVEIEYTATDSGCG 698 The following BLAST results are available for this feature:
BLAST of EWM23554.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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