EWM29962.1, cds711 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|585112558|gb|EWM29962.1| (udp-glucose 4-epimerase [Nannochloropsis gaditana]) HSP 1 Score: 385.185 bits (988), Expect = 2.687e-135 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 Query: 1 MTTPFMKGLGQYAAPIFMGASLLYALGQKHREDLRKARRDRAHNRILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCKIMGAAGRGRGREGRRRESRKCIRCPLC 190 MTTPFMKGLGQYAAPIFMGASLLYALGQKHREDLRKARRDRAHNRILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCKIMGAAGRGRGREGRRRESRKCIRCPLC Sbjct: 1 MTTPFMKGLGQYAAPIFMGASLLYALGQKHREDLRKARRDRAHNRILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCKIMGAAGRGRGREGRRRESRKCIRCPLC 190
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|769940464|ref|WP_045073823.1| (UDP-glucose 4-epimerase GalE [Arthrobacter sp. IHBB 11108] >gi|767257003|gb|AJT40886.1| UDP-glucose 4-epimerase [Arthrobacter sp. IHBB 11108]) HSP 1 Score: 152.14 bits (383), Expect = 1.234e-41 Identity = 80/119 (67.23%), Postives = 91/119 (76.47%), Query Frame = 0 Query: 45 RILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 +ILVTGGAGYIGSHTVL L+E G+++VVVD+L NS EE+LRRV L+G P V F + DLLDE ALE VF A VHFAGLKAVGESVA+PLLYY NNL GTLHLL +M HG K Sbjct: 2 KILVTGGAGYIGSHTVLGLLEKGHQLVVVDNLDNSSEESLRRVQELSGQP--VSFHQVDLLDEAALEQVFVQESP-EAVVHFAGLKAVGESVAEPLLYYRNNLIGTLHLLQSMKNHGVK 117
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1124294125|ref|WP_074588306.1| (UDP-glucose 4-epimerase GalE [Arthrobacter cupressi] >gi|1086572296|emb|SDI90630.1| UDP-glucose 4-epimerase [Arthrobacter cupressi]) HSP 1 Score: 151.754 bits (382), Expect = 1.917e-41 Identity = 77/121 (63.64%), Postives = 92/121 (76.03%), Query Frame = 0 Query: 45 RILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCKIM 165 RILVTGG GYIGSHTVL L+E+G+EV+VVD+L NS EE+LRRV L G P +F +ADLLDE ALE VF+ H A +HFAGLKAVGESV +PL YY NN+ GTL+LL AM HG + + Sbjct: 2 RILVTGGTGYIGSHTVLSLLESGHEVIVVDNLANSSEESLRRVAELAGRP--AVFVQADLLDEPALEEVFSAH-PVDAVIHFAGLKAVGESVQEPLNYYYNNIVGTLNLLRAMDSHGVRTI 119
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1189383967|gb|OSX71241.1| (hypothetical protein BU14_0574s0012 [Porphyra umbilicalis]) HSP 1 Score: 150.984 bits (380), Expect = 3.752e-41 Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 0 Query: 46 ILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 +LVTGGAGYIGSHTVL LV G+ VVVD+L NS EE+L+RV LTG ++++F DLL+EEALE+VF F AC+HFAGLKAVGESV PL YY NNLTGTL LLN + ++GCK Sbjct: 6 VLVTGGAGYIGSHTVLELVNEGFTAVVVDNLDNSSEESLKRVSELTGKSDQIVFRHVDLLNEEALEAVFKEF-TFSACIHFAGLKAVGESVKLPLKYYHNNLTGTLILLNLLDKYGCK 122
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1081788339|ref|WP_070350096.1| (UDP-glucose 4-epimerase GalE [Arthrobacter sp. SW1] >gi|1079492223|gb|OFI37196.1| UDP-glucose 4-epimerase GalE [Arthrobacter sp. SW1]) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-41 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0 Query: 45 RILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 +ILVTGG GYIGSHTVL L+E+G+EVVVVD+LVNS EE+LRRV L G + +F +ADLLDE ALESVF H A +HFAGLKAVGESV +PL YY NN+ GTL+LL AM H + Sbjct: 2 KILVTGGTGYIGSHTVLALLESGHEVVVVDNLVNSSEESLRRVAELAG--KAAVFVEADLLDEPALESVFGQH-SVDAVIHFAGLKAVGESVQQPLAYYHNNIVGTLNLLRAMDAHDVR 117
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1199533341|ref|WP_087270036.1| (MULTISPECIES: UDP-glucose 4-epimerase GalE [Flavonifractor] >gi|1198422021|gb|OUN10378.1| UDP-glucose 4-epimerase GalE [Flavonifractor sp. An91] >gi|1198528878|gb|OUO14908.1| UDP-glucose 4-epimerase GalE [Flavonifractor sp. An4]) HSP 1 Score: 149.443 bits (376), Expect = 1.247e-40 Identity = 77/118 (65.25%), Postives = 89/118 (75.42%), Query Frame = 0 Query: 46 ILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 ILV+GGAGYIGSHT + LV+AGYE+VV D+LVNSCEEA+RRV + G P V F KADL D +E VF H A +HFAGLKAVGESV+KPL YY+NNL TL LLNAM +HG K Sbjct: 3 ILVSGGAGYIGSHTCVELVQAGYEIVVADNLVNSCEEAVRRVEQIVGKP--VPFEKADLCDPLQVEEVFCRHPEIEAVIHFAGLKAVGESVSKPLEYYSNNLMSTLVLLNAMRKHGVK 118
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1199449235|ref|WP_087189266.1| (UDP-glucose 4-epimerase GalE [Flavonifractor sp. An52] >gi|1198493524|gb|OUN80299.1| UDP-glucose 4-epimerase GalE [Flavonifractor sp. An52]) HSP 1 Score: 149.443 bits (376), Expect = 1.418e-40 Identity = 77/118 (65.25%), Postives = 89/118 (75.42%), Query Frame = 0 Query: 46 ILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 ILV+GGAGYIGSHT + LV+AGYE+VV D+LVNSCEEA+RRV + G P V F KADL D +E VF H A +HFAGLKAVGESV+KPL YY+NNL TL LLNAM +HG K Sbjct: 3 ILVSGGAGYIGSHTCVELVQAGYEIVVADNLVNSCEEAVRRVEQIVGKP--VPFEKADLCDPLQVEEVFCRHPEIEAVIHFAGLKAVGESVSKPLEYYSNNLMSTLVLLNAMRKHGVK 118
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|524734452|emb|CDE36179.1| (uDP-glucose 4-epimerase [Eubacterium sp. CAG:38]) HSP 1 Score: 148.288 bits (373), Expect = 3.745e-40 Identity = 76/118 (64.41%), Postives = 90/118 (76.27%), Query Frame = 0 Query: 46 ILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 ILVTGGAGYIGSHTV+ L AGYEVVVVD+LVNS EAL+RV +TG P V F +AD+ D+EALE +FA +C+HFAGLKAVGESVAKPL YY NN++G+L L + M HG K Sbjct: 3 ILVTGGAGYIGSHTVVELQNAGYEVVVVDNLVNSSREALKRVEKITGKP--VTFYEADINDKEALEKIFAQE-KIESCIHFAGLKAVGESVAKPLEYYMNNISGSLVLFDVMRNHGVK 117
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|1152010583|ref|WP_078108292.1| (UDP-glucose 4-epimerase GalE [Arthrobacter sp. SRS-W-1-2016] >gi|1151039298|gb|OOP60364.1| UDP-glucose 4-epimerase GalE [Arthrobacter sp. SRS-W-1-2016]) HSP 1 Score: 148.288 bits (373), Expect = 4.075e-40 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0 Query: 45 RILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 RILVTGG GYIGSHTVL L+E G+EVVVVD+LVNS EE+LRRVG L G + F + DL+DE ALE+VF H A +HFAGLKAVGESV +PL YY NN+ GTL+LL AM +HG + Sbjct: 2 RILVTGGTGYIGSHTVLSLLETGHEVVVVDNLVNSSEESLRRVGELAG--KTAAFHRVDLVDEAALEAVFDQH-SIDAVIHFAGLKAVGESVQEPLNYYYNNIVGTLNLLRAMDKHGVR 117
BLAST of EWM29962.1 vs. NCBI_GenBank
Match: gi|947976377|ref|WP_056636121.1| (UDP-glucose 4-epimerase GalE [Arthrobacter sp. Soil736] >gi|946393998|gb|KRE44634.1| UDP-glucose 4-epimerase [Arthrobacter sp. Soil736]) HSP 1 Score: 147.902 bits (372), Expect = 4.588e-40 Identity = 77/119 (64.71%), Postives = 92/119 (77.31%), Query Frame = 0 Query: 45 RILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTGHPEKVIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCK 163 +ILVTGG GYIGSHTVL L EAG+EVVV+D+LVNS EE+LRRV LTG ++ F DLLDE A+++VF H G A +HFAGLKAVGESV +PL YY NNL GTL+L+ AM RHG + Sbjct: 2 KILVTGGTGYIGSHTVLSLQEAGHEVVVIDNLVNSSEESLRRVAELTG--KEAAFHNVDLLDEPAVDAVFDRH-GIDAVIHFAGLKAVGESVREPLKYYHNNLVGTLNLIRAMDRHGVR 117 The following BLAST results are available for this feature:
BLAST of EWM29962.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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