EWM23569.1, cds7101 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|585104701|gb|EWM23569.1| (stress regulated protein [Nannochloropsis gaditana]) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0 Query: 1 MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR 419 MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR Sbjct: 1 MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR 419
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|298705023|emb|CBJ28498.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.553 bits (301), Expect = 6.750e-26 Identity = 63/143 (44.06%), Postives = 94/143 (65.73%), Query Frame = 0 Query: 62 SGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDR--ISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSP 202 SG T + GT+F D L +Q+ K++ SS+DR+S ++MGGIAAEA+ + N++GGS+DE +I ++S + P DR I +QA WAA +AVL+I+++ EAYE LV AL++G +G+CV +E L + P A P SP Sbjct: 320 SGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVTIVEAELAKRELPGDVRRARRQPASP 462
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551549510|ref|XP_005762339.1| (hypothetical protein EMIHUDRAFT_45563, partial [Emiliania huxleyi CCMP1516] >gi|485611336|gb|EOD09910.1| hypothetical protein EMIHUDRAFT_45563, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.923 bits (276), Expect = 2.269e-25 Identity = 63/120 (52.50%), Postives = 81/120 (67.50%), Query Frame = 0 Query: 67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALI-LLMSLLG---FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182 G AGT+F D L + + V SS+DRYS +VM GIAAEA A+GG +DEQAL+ LL SL G + +I+NQARWAA A L I+ + A++ALV AL AG+SVG CV+AIE+A Sbjct: 44 GAAGTVFFDPLLADAMRAGSVPRSSVDRYSVVVMAGIAAEAELHGQAEGGRADEQALVRLLTSLDGGRSWDYAKITNQARWAASSAALCIRAHRPAFDALVEALAAGRSVGTCVMAIEEA 163
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551625382|ref|XP_005792829.1| (hypothetical protein EMIHUDRAFT_57188, partial [Emiliania huxleyi CCMP1516] >gi|485647174|gb|EOD40400.1| hypothetical protein EMIHUDRAFT_57188, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.153 bits (274), Expect = 3.712e-25 Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 0 Query: 67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALI-LLMSLLG---FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182 G AGT+F D L + + V SS+DRYS +VM GIAAEA A+GG +DEQAL+ LL SL G + +I+NQARWAA A L+++ + A++ALV AL AG+SVG CV+AIE+A Sbjct: 44 GAAGTVFFDPLLADAMRAGSVPRSSVDRYSVVVMAGIAAEAELHGQAEGGRADEQALVRLLTSLDGGRSWDYAKITNQARWAASSAALLVRAHRPAFDALVEALAAGRSVGTCVMAIEEA 163
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|1072234254|gb|OEU18984.1| (hypothetical protein FRACYDRAFT_183492 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 110.538 bits (275), Expect = 4.854e-24 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 0 Query: 69 AGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMS-LLGFPLD--------RISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182 AGT F D L Q+E +K++ SS+DRYS IVM GIAAEA+++ A GG+ DEQALI +S L G P I NQARW AL++VL+IK+Y E YEALV A++ G S+G C+ AIE+ Sbjct: 85 AGTSFFDPNLSSQIENSKITRSSIDRYSIIVMAGIAAEAISYGGADGGAGDEQALIAFLSNLNGDPSSSVPAWNDITIRNQARWGALQSVLIIKEYKECYEALVDAMEQGGSLGDCIYAIENT 207
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|545708100|ref|XP_005706363.1| (hypothetical protein isoform 2 [Galdieria sulphuraria] >gi|452822827|gb|EME29843.1| hypothetical protein isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 108.227 bits (269), Expect = 2.457e-22 Identity = 55/120 (45.83%), Postives = 82/120 (68.33%), Query Frame = 0 Query: 67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPL--DRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALE 184 G+AGT+F D+ L +L ++ +++DRYS ++M GIAAEAL + A+GG SDE AL+ +++ L P +R+ NQARWA L+A+L+IK +AY+ALV AL + K +G C+ IE E Sbjct: 280 GQAGTLFFDRKLESELSTGFLTDATIDRYSIVLMAGIAAEALEYGQAEGGQSDEAALLRVLTCLNPPWSKERVFNQARWAVLQAILIIKKQKKAYDALVHALSSKKPLGDCIAMIEANYE 399
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|873236176|emb|CEL99411.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.227 bits (269), Expect = 2.693e-22 Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 0 Query: 43 HFCCGLFRIPPHGRAS------FPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFP---LDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183 HF G P R F G+ GTIF + E++ + ++ ++DR S I M GIAAEAL F NA+GG SDE AL L + FP L R++ QARWA +AVL++K+Y +AY+ LV AL+ GK VG CV AIE L Sbjct: 205 HFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEEVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVEAIERGL 354
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|873230380|emb|CEM11091.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.227 bits (269), Expect = 3.102e-22 Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 0 Query: 43 HFCCGLFRIPPHGRAS------FPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFP---LDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183 HF G P R F G+ GTIF + E++ + ++ ++DR S I M GIAAEAL F NA+GG SDE AL L + FP L R++ QARWA +AVL++K+Y +AY+ LV AL+ GK VG CV AIE L Sbjct: 227 HFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEKVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVDAIERGL 376
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551656823|ref|XP_005831184.1| (hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712] >gi|428175313|gb|EKX44204.1| hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712]) HSP 1 Score: 107.071 bits (266), Expect = 3.223e-22 Identity = 50/119 (42.02%), Postives = 83/119 (69.75%), Query Frame = 0 Query: 67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPL--DRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183 G+AGT+F D L QL +V+ +++DRY+ ++MGGIAAEA+ ++ A+GG+SDE AL+ + L P ++ NQARWA A+L+++++ AY++L A+ G+S+G C+ +E+AL Sbjct: 109 GQAGTVFFDNDLSTQLNANRVTRTAIDRYTIVLMGGIAAEAMNYEQAEGGASDESALVSFLVGLLPPWQPQQVLNQARWAVTEAILLLREHRAAYDSLCDAMARGESLGTCISVLENAL 227
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|1189394386|gb|OSX81269.1| (hypothetical protein BU14_0023s0074 [Porphyra umbilicalis]) HSP 1 Score: 107.842 bits (268), Expect = 5.347e-22 Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0 Query: 67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLG--FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIE 180 G+AGT+F D L +L + K+S S+L+R+S ++MGGIAAEA+ + A+GG SDE L+ ++S + +P + NQARWAAL A+L+++ + AY+ALV A++A + +G+CV IE Sbjct: 286 GQAGTVFTDARLEAELRRGKLSGSALERFSIVLMGGIAAEAIAYGQAEGGQSDEAVLVGILSGISPPWPPAAVVNQARWAALEAILLLRQHAAAYDALVDAMRAKRPLGECVAVIE 401 The following BLAST results are available for this feature:
BLAST of EWM23569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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