EWM23569.1, cds7101 (CDS) Nannochloropsis gaditana

Overview
NameEWM23569.1
Unique Namecds7101
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:489375..490634 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23569.1
Productstress regulated protein
Orig transcript idgnl|cribi|Naga_100638g1.3214.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:489375..490634 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|585104701|gb|EWM23569.1| (stress regulated protein [Nannochloropsis gaditana])

HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:    1 MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR 419
            MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR
Sbjct:    1 MWEAGEKEVRVAFWRWWVGWNVSYEGRKGPSDEGPASLFLPTHFCCGLFRIPPHGRASFPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSPPPAPVPSSGAKEFADLQRVLMPSLPPSLANADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEVSGMGGEEEIQGKIELRGEEMDEEKEIEDQLKSLDEKLKALNMQLGGRVGEGTWEEGGGRDKRMGRRGAGRGVVDKGVGNKSAGKRMQEQGTKAYGRRRESRNSRLRMSLLPFLFLALASRLRMHDR 419          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|298705023|emb|CBJ28498.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 120.553 bits (301), Expect = 6.750e-26
Identity = 63/143 (44.06%), Postives = 94/143 (65.73%), Query Frame = 0
Query:   62 SGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDR--ISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGPPPSP 202
            SG T  + GT+F D  L +Q+   K++ SS+DR+S ++MGGIAAEA+ + N++GGS+DE  +I ++S +  P DR  I +QA WAA +AVL+I+++ EAYE LV AL++G  +G+CV  +E  L   + P     A   P SP
Sbjct:  320 SGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVTIVEAELAKRELPGDVRRARRQPASP 462          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551549510|ref|XP_005762339.1| (hypothetical protein EMIHUDRAFT_45563, partial [Emiliania huxleyi CCMP1516] >gi|485611336|gb|EOD09910.1| hypothetical protein EMIHUDRAFT_45563, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 110.923 bits (276), Expect = 2.269e-25
Identity = 63/120 (52.50%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALI-LLMSLLG---FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182
            G AGT+F D  L + +    V  SS+DRYS +VM GIAAEA     A+GG +DEQAL+ LL SL G   +   +I+NQARWAA  A L I+ +  A++ALV AL AG+SVG CV+AIE+A
Sbjct:   44 GAAGTVFFDPLLADAMRAGSVPRSSVDRYSVVVMAGIAAEAELHGQAEGGRADEQALVRLLTSLDGGRSWDYAKITNQARWAASSAALCIRAHRPAFDALVEALAAGRSVGTCVMAIEEA 163          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551625382|ref|XP_005792829.1| (hypothetical protein EMIHUDRAFT_57188, partial [Emiliania huxleyi CCMP1516] >gi|485647174|gb|EOD40400.1| hypothetical protein EMIHUDRAFT_57188, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 110.153 bits (274), Expect = 3.712e-25
Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 0
Query:   67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALI-LLMSLLG---FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182
            G AGT+F D  L + +    V  SS+DRYS +VM GIAAEA     A+GG +DEQAL+ LL SL G   +   +I+NQARWAA  A L+++ +  A++ALV AL AG+SVG CV+AIE+A
Sbjct:   44 GAAGTVFFDPLLADAMRAGSVPRSSVDRYSVVVMAGIAAEAELHGQAEGGRADEQALVRLLTSLDGGRSWDYAKITNQARWAASSAALLVRAHRPAFDALVEALAAGRSVGTCVMAIEEA 163          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|1072234254|gb|OEU18984.1| (hypothetical protein FRACYDRAFT_183492 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 110.538 bits (275), Expect = 4.854e-24
Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 0
Query:   69 AGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMS-LLGFPLD--------RISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDA 182
            AGT F D  L  Q+E +K++ SS+DRYS IVM GIAAEA+++  A GG+ DEQALI  +S L G P           I NQARW AL++VL+IK+Y E YEALV A++ G S+G C+ AIE+ 
Sbjct:   85 AGTSFFDPNLSSQIENSKITRSSIDRYSIIVMAGIAAEAISYGGADGGAGDEQALIAFLSNLNGDPSSSVPAWNDITIRNQARWGALQSVLIIKEYKECYEALVDAMEQGGSLGDCIYAIENT 207          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|545708100|ref|XP_005706363.1| (hypothetical protein isoform 2 [Galdieria sulphuraria] >gi|452822827|gb|EME29843.1| hypothetical protein isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 108.227 bits (269), Expect = 2.457e-22
Identity = 55/120 (45.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query:   67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPL--DRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALE 184
            G+AGT+F D+ L  +L    ++ +++DRYS ++M GIAAEAL +  A+GG SDE AL+ +++ L  P   +R+ NQARWA L+A+L+IK   +AY+ALV AL + K +G C+  IE   E
Sbjct:  280 GQAGTLFFDRKLESELSTGFLTDATIDRYSIVLMAGIAAEALEYGQAEGGQSDEAALLRVLTCLNPPWSKERVFNQARWAVLQAILIIKKQKKAYDALVHALSSKKPLGDCIAMIEANYE 399          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|873236176|emb|CEL99411.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 108.227 bits (269), Expect = 2.693e-22
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 0
Query:   43 HFCCGLFRIPPHGRAS------FPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFP---LDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183
            HF  G     P  R        F       G+ GTIF    + E++ + ++   ++DR S I M GIAAEAL F NA+GG SDE AL L +    FP   L R++ QARWA  +AVL++K+Y +AY+ LV AL+ GK VG CV AIE  L
Sbjct:  205 HFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEEVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVEAIERGL 354          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|873230380|emb|CEM11091.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 108.227 bits (269), Expect = 3.102e-22
Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 0
Query:   43 HFCCGLFRIPPHGRAS------FPSSGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFP---LDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183
            HF  G     P  R        F       G+ GTIF    + E++ + ++   ++DR S I M GIAAEAL F NA+GG SDE AL L +    FP   L R++ QARWA  +AVL++K+Y +AY+ LV AL+ GK VG CV AIE  L
Sbjct:  227 HFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEKVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVDAIERGL 376          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|551656823|ref|XP_005831184.1| (hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712] >gi|428175313|gb|EKX44204.1| hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712])

HSP 1 Score: 107.071 bits (266), Expect = 3.223e-22
Identity = 50/119 (42.02%), Postives = 83/119 (69.75%), Query Frame = 0
Query:   67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPL--DRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDAL 183
            G+AGT+F D  L  QL   +V+ +++DRY+ ++MGGIAAEA+ ++ A+GG+SDE AL+  +  L  P    ++ NQARWA   A+L+++++  AY++L  A+  G+S+G C+  +E+AL
Sbjct:  109 GQAGTVFFDNDLSTQLNANRVTRTAIDRYTIVLMGGIAAEAMNYEQAEGGASDESALVSFLVGLLPPWQPQQVLNQARWAVTEAILLLREHRAAYDSLCDAMARGESLGTCISVLENAL 227          
BLAST of EWM23569.1 vs. NCBI_GenBank
Match: gi|1189394386|gb|OSX81269.1| (hypothetical protein BU14_0023s0074 [Porphyra umbilicalis])

HSP 1 Score: 107.842 bits (268), Expect = 5.347e-22
Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0
Query:   67 GEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLG--FPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIE 180
            G+AGT+F D  L  +L + K+S S+L+R+S ++MGGIAAEA+ +  A+GG SDE  L+ ++S +   +P   + NQARWAAL A+L+++ +  AY+ALV A++A + +G+CV  IE
Sbjct:  286 GQAGTVFTDARLEAELRRGKLSGSALERFSIVLMGGIAAEAIAYGQAEGGQSDEAVLVGILSGISPPWPPAAVVNQARWAALEAILLLRQHAAAYDALVDAMRAKRPLGECVAVIE 401          
The following BLAST results are available for this feature:
BLAST of EWM23569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104701|gb|EWM23569.1|0.000e+0100.00stress regulated protein [Nannochloropsis gaditana... [more]
gi|298705023|emb|CBJ28498.1|6.750e-2644.06conserved unknown protein [Ectocarpus siliculosus][more]
gi|551549510|ref|XP_005762339.1|2.269e-2552.50hypothetical protein EMIHUDRAFT_45563, partial [Em... [more]
gi|551625382|ref|XP_005792829.1|3.712e-2551.67hypothetical protein EMIHUDRAFT_57188, partial [Em... [more]
gi|1072234254|gb|OEU18984.1|4.854e-2452.03hypothetical protein FRACYDRAFT_183492 [Fragilario... [more]
gi|545708100|ref|XP_005706363.1|2.457e-2245.83hypothetical protein isoform 2 [Galdieria sulphura... [more]
gi|873236176|emb|CEL99411.1|2.693e-2243.33unnamed protein product [Vitrella brassicaformis C... [more]
gi|873230380|emb|CEM11091.1|3.102e-2243.33unnamed protein product [Vitrella brassicaformis C... [more]
gi|551656823|ref|XP_005831184.1|3.223e-2242.02hypothetical protein GUITHDRAFT_87555, partial [Gu... [more]
gi|1189394386|gb|OSX81269.1|5.347e-2245.69hypothetical protein BU14_0023s0074 [Porphyra umbi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7118rna7118Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications