EWM23573.1, cds7100 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|585104706|gb|EWM23573.1| (hypothetical protein Naga_101506g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
Query: 1 MHISQWATQLFVAMVATSHAFLGPSTTPLLPRTISTTPVLHSGSRALCRPTAALPRQPSFSFCAPPSPPYSRLHASPAPKEPEEKKDEKEAQPSASSPPSHDSAASGQDVSAPDTRSYDLGEEGRQKAGHGNSDVQRKFDALVEEGKDLLGLVDYLKSHQTEIHITRPQVSLMLDKLADTQVVRENLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNGRWEKGHRQPGGRG 394
MHISQWATQLFVAMVATSHAFLGPSTTPLLPRTISTTPVLHSGSRALCRPTAALPRQPSFSFCAPPSPPYSRLHASPAPKEPEEKKDEKEAQPSASSPPSHDSAASGQDVSAPDTRSYDLGEEGRQKAGHGNSDVQRKFDALVEEGKDLLGLVDYLKSHQTEIHITRPQVSLMLDKLADTQVVRENLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNGRWEKGHRQPGGRG
Sbjct: 1 MHISQWATQLFVAMVATSHAFLGPSTTPLLPRTISTTPVLHSGSRALCRPTAALPRQPSFSFCAPPSPPYSRLHASPAPKEPEEKKDEKEAQPSASSPPSHDSAASGQDVSAPDTRSYDLGEEGRQKAGHGNSDVQRKFDALVEEGKDLLGLVDYLKSHQTEIHITRPQVSLMLDKLADTQVVRENLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNGRWEKGHRQPGGRG 394
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|298705023|emb|CBJ28498.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.694 bits (278), Expect = 4.747e-23 Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 0
Query: 232 ITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVD-AGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNG 381
+T+TY LK+ GLLRG+ I +G S S+ V + + +G + L PG+ W +GV + E G+D VIP TL F DR LL G ++L R+++P Y+ERIIRHEAGHFL+A+LLGCPVQ C+L P G
Sbjct: 172 LTNTYNALKAAGLLRGFGSIDFSKGPSSQ--SRDVSAEKLLSLSG-VEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIIRHEAGHFLVAYLLGCPVQACLLDPFVLG 319
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|551656823|ref|XP_005831184.1| (hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712] >gi|428175313|gb|EKX44204.1| hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712]) HSP 1 Score: 98.9821 bits (245), Expect = 1.798e-19 Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
Query: 280 MSALTPGQAQNLWAYSGVALCVLELAICKFYGVD-AGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
MSALTP AQ W +G+ LC +E + G+D VIP T F VDR L G F++ R + P+YKE++I+HEAGHFLLA+LLGCP+Q L
Sbjct: 1 MSALTPKNAQYGWLAAGLGLCTVEYFLALNAGLDPLRTVIPFTAFLFVVDRLLTSGAAFESAYRFLFPKYKEKVIKHEAGHFLLAYLLGCPIQGFFL 97
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|223998690|ref|XP_002289018.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976126|gb|EED94454.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 89.7373 bits (221), Expect = 7.356e-16 Identity = 73/244 (29.92%), Postives = 120/244 (49.18%), Query Frame = 0
Query: 145 EGKDLLGLVDYLKSHQTEI-HITRPQVSLMLDKL-ADTQVVRENLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYL-----------SKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
E +L L+ +LKS+ + I ++T Q++ + D + T EN ++++A E + + A + +V+ + +T Y +L+ G L + I + S + SK + +++EQ TG + M LTP + NL Y G AL VLE + + ++ ++ TLL +D+ L+ G F+ R+VLP K RI +HEAGHFL A+LLGCPV+ VL
Sbjct: 91 ESNNLQALISHLKSNPSSIPNLTNAQLTSIFDAIEVATAETDENTVNKRAI------EDATLISATSSSSKGSNADVEFRSLDRVRSQ-MTQLYQLLREGGQLNVFGAIGRKPPSSSKFATPEGPIYPTMGSKIITPNLLEQITG-MEMINLTP-RPTNLLLYGGAALAVLEGILSLYLHINFNLLVFCTLLLALLDQVLVSGAVFETGLRMVLPEMKTRITKHEAGHFLCAYLLGCPVEGVVL 325
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|1210531724|dbj|GAX09691.1| (hypothetical protein FisN_19Lh158 [Fistulifera solaris]) HSP 1 Score: 88.1965 bits (217), Expect = 2.395e-15 Identity = 72/244 (29.51%), Postives = 116/244 (47.54%), Query Frame = 0
Query: 132 NSDVQRKFDALVEEGKDLLGLVDYLKSHQTEIHITRPQVSLMLDKLADTQVVRENLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
N++ +FD+L+++ K L V +L+ H DT + + DR K + E+ A N RA PLE + ++ A+ Y L+ + L+ Y +S + + S S+ V+E+ GLPM ALTP +W +GV +E + G+D A++ TLLG +DR LL G F+ ++ P +++I++HEA H A+LLGCPV+ VL
Sbjct: 58 NTNDASQFDSLLDQVK-LREAVTFLRQH------------------PDTPLTK----DRWIKIFTAIEERTRNAEENT---ENLRADFPLESAARNEMTAM---YQTLRDQNHLQLYGAVS-----TMTEGSHSIPPPVMEE-ILGLPMQALTPQATNTIW-IAGVLTATVEAFVSLASGIDFNALVLLTLLGAAMDRILLNGALFETYLKLFSPGVQQKILKHEANHLFAAYLLGCPVEGIVL 265
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|1210521590|dbj|GAX19580.1| (hypothetical protein FisN_19Hh158 [Fistulifera solaris]) HSP 1 Score: 87.4261 bits (215), Expect = 3.727e-15 Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 0
Query: 189 DRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
DR K + E+ A N RA PLE + ++ A+ Y L+ + L+ Y +S + + S S+ V+E+ GLPM ALTP +W +GV +E G+D A++ TLLG +DR LL G F+ ++ P +++I++HEA H A+LLGCPV+ VL
Sbjct: 92 DRWNKIFTAIEERTRNAEEN---TENLRADFPLESAARNEMTAM---YQTLRDQNHLQLYGAVS-----TMTAGSHSIPPPVMEE-ILGLPMQALTPQATNTIW-IAGVLTATVEALASLASGIDFNALVLLTLLGAVLDRILLNGAIFETYLKLFSPGVQQKILKHEANHLFAAYLLGCPVEGIVL 265
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|1189394386|gb|OSX81269.1| (hypothetical protein BU14_0023s0074 [Porphyra umbilicalis]) HSP 1 Score: 80.8777 bits (198), Expect = 5.098e-13 Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = 0
Query: 232 ITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQN-LWAYSGVALCVLELAICKFYGVDAGA--VIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
+T YA L+ +G L + C ++ + K VD +E R G LP+SAL P ++ W +G+ + V A+ GV A + LG+ D+ L G F+ L R V P Y E++++HEAGHFLLA+L G PV+ VL
Sbjct: 131 VTLLYAELQKRGHLAAFGCAAE--AGTRPLGPKVVDAADLEARAG-LPISALAPKRSTGAWWQLAGIGVVVGVNALASAAGVQGLAQPALAVLFLGWVADQRLARGAVFETLYRAVKPEYAEKVLKHEAGHFLLAYLTGAPVRGYVL 274
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|397570891|gb|EJK47513.1| (hypothetical protein THAOC_33760 [Thalassiosira oceanica]) HSP 1 Score: 79.7221 bits (195), Expect = 1.565e-12 Identity = 66/237 (27.85%), Postives = 115/237 (48.52%), Query Frame = 0
Query: 152 LVDYLKSHQTEIH-ITRPQVSLMLDKLADTQVVRE-NLMDRQAKGVVPVREKGMVANPNDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISD-----------QRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
++ YL+S+++ I ++R Q+ + D + E N +++++ V V N +F + KV+ E +T Y +L+ +G L + I R + SK + ++E+ T L M +LTP ++ N Y+G AL +LE I + + + ++ T++ +D+ L+ G F+ R+V P RI +HEAGHFL A+LLGCPV+ VL
Sbjct: 70 ILKYLQSNRSCIQSLSRAQIQSIFDSVESATAESETNTVNKRSIQDVAVE------NAVEF-----------QALDKVRSE-MTKMYRLLREEGRLNVFGAIGRLPPQSSGLPPPDRPIFPADGSKIITPTLLEEITN-LKMLSLTP-ESTNFLLYAGSALAILEGIISLNFDISSNLLVSVTIVLALMDQILVSGAVFETGLRMVNPSLTTRITKHEAGHFLCAYLLGCPVEGVVL 286
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|545708098|ref|XP_005706362.1| (hypothetical protein isoform 1 [Galdieria sulphuraria] >gi|452822826|gb|EME29842.1| hypothetical protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 75.8702 bits (185), Expect = 1.724e-11 Identity = 46/149 (30.87%), Postives = 84/149 (56.38%), Query Frame = 0
Query: 232 ITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAY--SGVALCVLELAICKFYGVDAGAVIP---GTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
+ + Y LK K L+ ++ I + E SK + D + + T +P+ AL P ++Q++++Y +GV + + + ++ + P L+GF D+ L G F+ L + + P YK+++++HEAGHFL+++LLGCPV+ VL
Sbjct: 106 VAEVYDELKKKNCLKAFSVIDSEEKLPEP--SKQIGLDKLVE-TAKIPLEALRP-RSQSIFSYQLAGVVFSLSLIFFSHLFHIE-NIIRPIGISLLVGFLCDQIALQGAIFEELYKNLFPIYKKKVLKHEAGHFLVSYLLGCPVRGIVL 249
BLAST of EWM23573.1 vs. NCBI_GenBank
Match: gi|873236176|emb|CEL99411.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 71.633 bits (174), Expect = 4.614e-10 Identity = 43/147 (29.25%), Postives = 75/147 (51.02%), Query Frame = 0
Query: 232 ITDTYAILKSKGLLRGYACISDQRGY---SESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVL 375
I+ + IL G L+GY + ++ + + IE+ T + LTP + W+ +GVA + ++A+ ++ ++P VD +++ARVV P Y+ERI++HEAGHFL+ +LLG P+Q C++
Sbjct: 78 ISHLFRILSEAGALKGYGLCGTSGCWPVAGQAETNVELQNANIEKYTN-FTIDKLTPKGSGVFWSVAGVAFALAQIALLPPETLNI--LVPLECGVVLVDSLFFRSVLSESVARVVFPPYQERIVKHEAGHFLIGYLLGAPIQRCIV 221 The following BLAST results are available for this feature:
BLAST of EWM23573.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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