EWM23587.1, cds7085 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|585104728|gb|EWM23587.1| (hypothetical protein Naga_100139g15 [Nannochloropsis gaditana]) HSP 1 Score: 869.766 bits (2246), Expect = 0.000e+0 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0
Query: 1 MIVYARLDFLNSDKLRHVPVQPGHFPTPHSMNHLAIRHLKAWLVCFLVPVSIRAFKPLSSRPTLARPSHHMPSPGICRNLHPPRPFSSSTAPSSSLLLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTLAASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNAWTKRRA 446
MIVYARLDFLNSDKLRHVPVQPGHFPTPHSMNHLAIRHLKAWLVCFLVPVSIRAFKPLSSRPTLARPSHHMPSPGICRNLHPPRPFSSSTAPSSSLLLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTLAASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNAWTKRRA
Sbjct: 1 MIVYARLDFLNSDKLRHVPVQPGHFPTPHSMNHLAIRHLKAWLVCFLVPVSIRAFKPLSSRPTLARPSHHMPSPGICRNLHPPRPFSSSTAPSSSLLLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTLAASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNAWTKRRA 446
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|397639122|gb|EJK73398.1| (hypothetical protein THAOC_04981 [Thalassiosira oceanica]) HSP 1 Score: 206.453 bits (524), Expect = 1.472e-55 Identity = 136/332 (40.96%), Postives = 181/332 (54.52%), Query Frame = 0
Query: 103 WPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTL-AASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRF---SLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGL 430
WP RDP + ++PL R+ +T + + T Y H + SPVLAS+AVTL ++ + LGQAA CGSFAGMS LLP+F G +S +E I+ N LG+GGRLGATAFLA + A + RF L S I++ +G+VATI LRE+SDD+AAADPVRA++VVG++ +L + + +LA YGG+FVGMSLPSRL+YG P G P P ++ LLASF+ AGA+ G VH LT+H G+WT GWGGKAG+C+F G ++RG
Sbjct: 350 WPLVRDPPGVASEFPLLVTRILVTCFSSVATWYLHLQN---GYSPVLASSAVTLLVSTCLDRRLGQAAFCGSFAGMSGGHLLPNFGSAALLGALSSASYELLININNVCLGIGGRLGATAFLATGIFAKYR----------------GVRFIGRKLRRGVWSSSSGVSSVAISMILFHIMGAVATIMLRESSDDSAAADPVRASSVVGVLGSLFI----NDPTSALALYGGSFVGMSLPSRLMYGNAP------------------GNARPGQPQ---SAANLLASFAGAGAIAGLVHALTIHSGYWT---GGWGGKAGLCAFAGCWVYRGF 634
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|224000794|ref|XP_002290069.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973491|gb|EED91821.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 195.282 bits (495), Expect = 8.428e-54 Identity = 142/345 (41.16%), Postives = 195/345 (56.52%), Query Frame = 0
Query: 97 LLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTL-AASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNA 440
LL R WP RDP + PD+PL R+ IT+L+ L T Y H + SPVLAS+A+TL ++ + LGQAA CGSFAGMS L P+F + GV SI +E IH +N LG+GGRLGATAFLA +++A ++ V A S L +++ + + + A+G+VATI LRE+SDD+ AADPVRA++V+GL+ AL + TS+ LA YGG+FVGM+LPSRL+YG P + A P + LL SF+ AGAL G +HG+T+H GWGGKAG+C+F G ++RG + ++N
Sbjct: 136 LLHRIKWPVQRDPPEVSPDFPLLLTRITITILSVLSTWYLHLFNGY---SPVLASSAITLLVSTCLDRRLGQAAFCGSFAGMSGGHLAPNFGTAVLLGVLASINYEVLIHMKNFCLGIGGRLGATAFLATSILA---KYRGVSAVGRKMRKGLWKSGSGGLSSIMVSM---------MAFHAIGAVATIFLRESSDDSGAADPVRASSVIGLLGALF--LKDPTSI--LALYGGSFVGMALPSRLMYGNAP--------GKAKQAQPQTPI-------------GLLLSFAGAGALAGMIHGMTIHW---GYWNGGWGGKAGLCAFAGCWLYRGFGNVYEIVRNG 437
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|224000792|ref|XP_002290068.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973490|gb|EED91820.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 186.037 bits (471), Expect = 1.206e-48 Identity = 133/368 (36.14%), Postives = 198/368 (53.80%), Query Frame = 0
Query: 74 PGICRNLHPPRPFSSSTAPSSSLLLPRHAWPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTL-AASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWSGLKNA 440
P I ++ P+ S + S+S L WP DP + P++PL R +T+L+ L T Y H + SPVLAS+A+TL ++ + LGQAA+CG+ AGMS L P+F + GV SI +E IH +N LG+GGRLGATAFLA +++A +R V + S S + +++ A+G+VATI LRE+SDD AADPV+A++V+GL+ A+ + +A YGG+FVGM+LPSRL++G+ P A + P P + SF++AGAL GA+HG+T+H G+W GK G+C+F G ++RG + + ++N
Sbjct: 338 PSITQHYSRPKVRSQIDSNSASTYLRGVKWPVHSDPLGVSPEFPLLLTRSTVTILSALATWYLHLFN---GCSPVLASSAITLLVSTCVERRLGQAALCGTLAGMSGGHLAPNFGTAVLLGVLASINYEVLIHMKNFCLGIGGRLGATAFLATSVVAKYRRVGSVGRKLRRGIWKSGAG------------GLSSVMITMMVFHAIGAVATICLRESSDDVGAADPVQASSVIGLMGAICLS----NPTAIMALYGGSFVGMALPSRLMHGSAP---------------GKARISQPHTPV------GMFTSFAVAGALAGAIHGMTIHWGYWNGGWG---GKIGLCAFAGCWLYRGFGNALAIVRNG 662
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|397639121|gb|EJK73397.1| (hypothetical protein THAOC_04980 [Thalassiosira oceanica]) HSP 1 Score: 181.03 bits (458), Expect = 2.197e-48 Identity = 137/334 (41.02%), Postives = 186/334 (55.69%), Query Frame = 0
Query: 103 WPQTRDPTPLPPDYPLAAARVGITVLACLLTSYSHTSHQAMCASPVLASAAVTL-AASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNAAADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTLPVAGWGGKAGMCSFVGVLIFRGLLRSWS 435
WP RDP + ++PL R+ +T L+ + T Y + S VLAS+A+TL ++ + LGQAA CGSFAGMS + P+ +V L V S +E IH N+ LG+GGRLGATAFLA +++A Q +V + S S ++ I++ LG+VATI LRE+SDD+AAADPVRA++VVGL+ AL + LA YGG+FVGMSLPSRL+YG P G P P + + LLASF+ AGA G +H LT+H G+WT GWGGKAG+C+F G ++R + +WS
Sbjct: 155 WPLVRDPPGVASEFPLLMTRILVTCLSSVGTWYLSLYNGY---SAVLASSALTLLVSTCLDRRLGQAAFCGSFAGMSGGHIAPNLSVALLLSVLASASYEVLIHINNSCLGIGGRLGATAFLATSIVAKYQGVGIVGKKLRRGVWKSGAGVSSVAISM-------------ILFHILGAVATIFLRESSDDSAAADPVRASSVVGLVGALFL----KDPTAILALYGGSFVGMSLPSRLMYGNAP------------------GNARPGQPQGAAS---LLASFAGAGAFAGLIHALTIHSGYWT---GGWGGKAGLCAFAGCWVYRAIQGTWS 444
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|1072238944|gb|OEU23671.1| (hypothetical protein FRACYDRAFT_177647 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 157.532 bits (397), Expect = 1.222e-40 Identity = 126/338 (37.28%), Postives = 172/338 (50.89%), Query Frame = 0
Query: 103 WPQTRDPTPLPPDYPLAAARVGITVLAC--------LLTSYSHTSHQAMCASPVLASAAVTLAASLI-APGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGG-RLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREASDDNA-AADPVRAAAVVGLISALTVGVYGHTSLGSLAAYGGAFVGMSLPSRLLYGAEPVLPPLSPDSSSDSALPAAGVPTPSLPSHSLTSGKLLASFSLAGALGGAVHGLTLHLGWWTL-PVAGWGGKAGMCSFVGVLIFR 428
+ T DP + DYPL R+ I + +C LLT+Y H A+ V+ S+AVTL S++ LGQAA+CGSFAGM S ++P+ + L G TSIL+E + LG+GG R G TAF+ V+P+ + SS R S L L + LP+ Y A+GS+ATI LRE SDD A A DPVRA+AV+GL AL + + + LA YGG+ VGMSLPS+L+ S S + + V +F +AGA G +HG T+ W+ A WGGKAG C+F+G +I+R
Sbjct: 2 FTTTNDPKGMSSDYPLGITRMLIIIGSCYLTWFVPQLLTNYPHH------ATNVMVSSAVTLVCSMMFDKRLGQAALCGSFAGMCSTSIIPTTKLALILGSITSILYEIMPFF----LGVGGERSGITAFI------------VLPSLLNGIGISSSYRGSKRLLKLSALNIHTTLLPMAFWY-AIGSIATIVLREISDDTAVAVDPVRASAVIGLAGAL---LLKYDKIAVLAVYGGSIVGMSLPSKLMMNNRSSFSSSSSSLLSKISKILSLV----------------LAFGIAGAFSGLIHGATIDWKLWSDHGGASWGGKAGTCAFLGCIIYR 297
BLAST of EWM23587.1 vs. NCBI_GenBank
Match: gi|551569158|ref|XP_005770534.1| (hypothetical protein EMIHUDRAFT_196179 [Emiliania huxleyi CCMP1516] >gi|485621662|gb|EOD18105.1| hypothetical protein EMIHUDRAFT_196179 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.781 bits (164), Expect = 7.054e-9 Identity = 81/239 (33.89%), Postives = 108/239 (45.19%), Query Frame = 0
Query: 126 TVLACLLTSYSHTSHQAMCASPVLASAAVTLAASLIAPGLGQAAMCGSFAGMSSPLLLPSFAVTLATGVCTSILFEAFIHYRNAALGLGGRLGATAFLAVNLIAASQRHFVVPASSSPFSFSSPTRFSLSLPALLHFIKTSPYLPLTIIYGALGSVATIALREA--SDDNAAADPVRAAAVVGLISALTV----------GVYGHTSLGSLAAYGGAFVGMS----LPSRLLYGAEPVL 348
+VL L T + +++ V ASA+VT+ A+L A MC SFAG S ++P A G T++ F+AF+ + G GGRLG AF+AVNL A Q V F +S A + F+ + + GS TI LR S DN P AAA VGL+ AL + G + S A YGGAFVGMS +P+ L + A VL
Sbjct: 8 SVLILLSTLLTWSANNVGGLGAVTASASVTMLAALAHKQSAAAVMCASFAGWVSSEVIPDVLWASALGAVTALTFQAFVVLKIGE-GWGGRLGLIAFIAVNLTAVCQDLGRV-----EHLFEGERYAVVSGDAAVWFVF------VCLASTTFGSFTTIYLRCNVPSLDN----PAAAAAFVGLLGALVMSGIPTSLLFANFGGKSGEVSAAVYGGAFVGMSSKNHVPNYLAFLATGVL 230 The following BLAST results are available for this feature:
BLAST of EWM23587.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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