EWM29971.1, cds707 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|585112572|gb|EWM29971.1| (pab-dependent poly -specific ribonuclease subunit 2 [Nannochloropsis gaditana]) HSP 1 Score: 1316.98 bits (3407), Expect = 0.000e+0 Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0
Query: 1 MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD 644
MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD
Sbjct: 1 MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD 644
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|1173952328|gb|OQS00044.1| (PAB-dependent poly(A)-specific ribonuclease subunit 2, partial [Thraustotheca clavata]) HSP 1 Score: 214.927 bits (546), Expect = 1.136e-55 Identity = 181/641 (28.24%), Postives = 290/641 (45.24%), Query Frame = 0
Query: 9 GHQMHMESPPDYEDDQVSTIQGHGTYMETHRV-PSDGYPI-TALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGP--SPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF-----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
G M M P YE + + E RV P++ + TA+AFDP +EL+W G GR++A P M+K+ SV ++ S ++QI GV++IS + ++ C+ A A SR GH R K D + G C A G HP + + VW +D G ++ +++ ++C ES+ + G + G+L DGSLRS + A G + +M + + G RS+NPYD++ AP ++ PDPL+KLFDLR + + F + P A+ A G+F L F+VT + +P GP M+ + +PSGE+L G+ DG V+ + + SP A+++ P VPL P++ PP++++P +P PAS +LFR T + P LPP A + +L V P +V+ PE K+ +D +G+ + +S LYG + + +DPR + + + + A D + PPRY+ +I + G DGF +F R+N T VGLEN LP +Y N++LQ+++F+P+++ H
Sbjct: 3 GQMMMMHPPHGYE--YYEQYPDNEEWAEIIRVAPTNANEVCTAVAFDPCQELVWTGFSTGRMTANLLPTMEKYSSVASNS--SAIKQIIPSYNGVIAISNSMAVLRSRGCVHNDTVVAEA-----------------SRAFTSGHLRSFDASKTSDYLLLGN------NAGCVAAYDLQGQLSHP----------IHKTPMPVWSMDFYHGNKIA----ISAMASC-ESSAMICAGSSTGQLDLFDGSLRSHRVEYSIPNAHKGSIVAMDMVGNYILTCGVSARSINPYDKN--APLKIYPDPLVKLFDLRTMGLITSIPFPSSAHLPPSFVRFQALAEGSHFYAADKGGEFYL---FDVTEPRQCHY-IP----VGPLAKNMSAMEIAPSGELLVCGSQDGSVVVFDSTQSTSPRALLDDPIVPLA-FPASYRAPPLALSPLEPAPASRYLFRRTVNDYGEEITPLSAWLPPQMDTALKHQM--TLVVAPKPTKVLLPEFAQKIQQKDNIGF--TQLNGTTQNSFLYGKGKAQVFATIDPRFVD------------KKITHRTAQAKSFDESDPCHVPPRYKYKEIKMNKHGTDGFMFDFARHNATQFVGLENTLPFSYMNSMLQILYFIPQVRQHALMH 574
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|1173950876|gb|OQR98814.1| (hypothetical protein ACHHYP_07866 [Achlya hypogyna]) HSP 1 Score: 208.764 bits (530), Expect = 1.398e-53 Identity = 177/605 (29.26%), Postives = 275/605 (45.45%), Query Frame = 0
Query: 48 TALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGP-----SPMACVAASPSGEMLALGTPDGLVISYTNS----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF-----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
TA+AFD +EL+W G NGRL+A P ++K+ SV ++ ++ I +G+V+IS ++ C+ + + VD G G + GH RP G K D + G C A G HP+ H T T VW +D G ++ T + M + G A G+L D LRS + A G + SM + + G RS+NPYD++ AP ++ PDPL+KLFDLR L QS+P PA +PS + PH A A G L D + P + P +A +A +PSGE+L G DG V+ + +S P A+++ P L P+ PP++++P +P PAS +LFRPT A+ P LPP + +T +L V P +V++P ++ + +G+ ++ +S ++G A+ VDPR + + + + A D + PPRY+ +I S G+DGF +F ++N TP VGLEN LP +Y NA+LQ+++F+P ++ +H
Sbjct: 49 TAVAFDQCQELVWTGHANGRLTAHLLPTLEKYSSVVSNT--GAIKHIIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVD--GSRGSLTC--------GHLRPYDGHKASDHLLLGN------SVGCVAAYDLQGQLSHPL------HKT----PTPVWSMDFYHGSKIAITALASHEDAPM-----ICAGSATGQLDLFDAGLRSHRVECSIPNAHAGNIVSMDMYGHYIITCGVSARSINPYDKN--APVKIYPDPLVKLFDLRTMGLVQSMPF---PATTSPSFVQFQPH-APGTHFYAANPDGDLYLFD-----------IEDPGQYQYSPVGPLARNVAALAVAPSGELLVTGCNDGTVVLFDSSQAANPRALLDDPLEALA-FPTAYQAPPLALSPLEPAPASRYLFRPTINAYGAPIPPLSSWLPP--NMDSTLKHEVTLVVAPKPIKVLDPTFAGRVQQKGTIGF--TQHGGVLKNSFVFGHGRTAAFTTVDPRFVD------------KKITHRVAQAKSFDESDPCHVPPRYKYKEIRMSKHGMDGFMFDFAKHNATPFVGLENTLPFSYMNALLQLLYFLPSVRGHALQH 580
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|813102817|ref|XP_012193937.1| (hypothetical protein SPRG_00453 [Saprolegnia parasitica CBS 223.65] >gi|641541864|gb|KDO35609.1| hypothetical protein SPRG_00453 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 203.371 bits (516), Expect = 1.213e-51 Identity = 180/597 (30.15%), Postives = 272/597 (45.56%), Query Frame = 0
Query: 52 FDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDE-RGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTC-GALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEA---VVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPT----HLAFPP-HPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
FDP +E+LW G NGRL+A P ++K+ SV ++ ++ + +G+V+IS ++ C+ + + VD RG GH RP K D + G + G L+ PL H PM VW +D G ++ T + M M G A G+L D SLRS + A G + SM + G RS+NPYD++ AP ++ PDPLIKLFD+R L QS+P P +PS + PH + G+ +L F++T + A +Q G + A AS SGE+LALG PDG V+ + +S + + P+ P++ PP++++P +P PAS +LFRPT A PP LPP V +L V P +V++P ++ +D +G+ ++ P +S +YG A VDPR + + V + A D + PPRY+ +I S G+DGF +F ++N T VGLEN LP +Y NA+LQ+++FVPE++A H
Sbjct: 50 FDPCQEVLWTGHANGRLTAHLLPTLEKYSSVISNA--GAIKTLIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVDHSRGA-----------LTCGHLRPYDSNKPNDHLLLGNSAGCVAAYDLQGQLSHPL--HKTPMP---------------VWSMDFYHGSKIAITALASHEDAPM-----MCAGSATGQLDLFDSSLRSHRVECSIPNAHAGNIVSMDMHGHYILTCGVSARSINPYDKN--APVKVYPDPLIKLFDVRTMGLVQSMPF---PGAASPSYVHFQPHAQGSHYYAGSRDGDLYL----FDIT--EPASYQYTPLGPLGTNASAMAFAS-SGELLALGAPDGGVVLFDSSQASNPKALLDDPLLPLAFPASFQAPPLALSPLEPAPASRYLFRPTINDYGEAIPPLSSWLPPHMDSTLKHEV--TLVVAPKPTKVLDPTFAARIQQKDTIGF--TQHGGVPKNSFVYGQGRVAAVATVDPRFVD------------KKVTHRTASAKSFDESDPCHVPPRYKYKEIKMSKHGMDGFMFDFAKHNATRFVGLENSLPFSYINALLQLLYFVPELRAHALLH 577
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|669143472|ref|XP_008607298.1| (hypothetical protein SDRG_03442 [Saprolegnia diclina VS20] >gi|530740995|gb|EQC39237.1| hypothetical protein SDRG_03442 [Saprolegnia diclina VS20]) HSP 1 Score: 201.83 bits (512), Expect = 3.527e-51 Identity = 178/597 (29.82%), Postives = 271/597 (45.39%), Query Frame = 0
Query: 52 FDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDE-RGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTC-GALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEA---VVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPT----HLAFPP-HPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
FDP +E+LW G NGRL+A P ++K+ SV ++ ++ + +G+V+IS ++ C+ + + VD RG GH RP K D + G + G L+ PL H PM VW +D G ++ T + M M G A G+L D SLRS + A G + SM + G RS+NPYD++ AP ++ PDPLIKLFD+R L QS+P P +PS + PH + G+ + +L F++T + +Q G + A AS SGE+LALG PDG V+ Y +S + + P+ P++ PP++++P +P PAS +LFRPT A PP LPP V +L V P +V++P ++ +D +G+ ++ P +S +YG A VDPR + + + + A D + PPRY+ +I S G+DGF +F ++N T VGLEN LP +Y NA+LQ+++FVPE++ H
Sbjct: 50 FDPCQEVLWTGHANGRLTAHLLPTLEKYSSVISNA--GAIKTLIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVDHSRGA-----------LTCGHLRPYDSNKPNDHLLLGNSLGCVAAYDLQGQLSHPL--HKTPMP---------------VWSMDFYHGSKIAITALASHDDAPM-----MCAGSATGQLDLFDSSLRSHRVECSIPNAHAGNIVSMDMHGHYILTCGVSARSINPYDKN--APVKVYPDPLIKLFDVRTMGLVQSMPF---PGAASPSYVQFQPHAQGSHYYAGSRDSDLYL----FDITEPGS--YQYTPLGPLGANASAMTFAS-SGELLALGAPDGGVVLYDSSQASNPKALLDDPLLPLAFPASFQAPPLALSPLEPAPASRYLFRPTINDYGEAIPPLSSWLPPHMDSTLKHEV--TLVVAPKPTKVLDPNFAARIQQKDTIGF--TQHGGVPKNSFVYGQGRSAAVATVDPRFVD------------KKMTHRTASAKSFDESDPCHVPPRYKYKEIKMSKHGMDGFMFDFAKHNGTRFVGLENSLPFSYINALLQLLYFVPELRTHALLH 577
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|673029068|ref|XP_008868495.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574476112|gb|ETW03111.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 186.037 bits (471), Expect = 5.089e-46 Identity = 172/631 (27.26%), Postives = 272/631 (43.11%), Query Frame = 0
Query: 34 YMETHRVPSDGYPIT------ALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPM----AAYVGEHVTVGGS----GTH----VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
+ E RV + P + A+AFD E+LWVG +GRL++ P + K+ SV ++P ++Q+ GVV+IS + ++ C+ A V G + TCG+LN+ H P+ VG + + G H +W LDL + + + SP C G + GRL F DG RS + A +G + ++ ++ V G RS+NPYD+ AP ++ PDPL+KLFD+R + + F + P + + A A G +L D D + + H PS + AS SGE++A G+ DG V+ Y + SP A+++ P PLE P PP++++P +P PAS ++FRP+ F P P+++ T + +L V P +V++PE K+ + +G+ +R Y +S ++G A VDPR E RR D V G A D + PP Y+ +I+ S +DG F+F ++N++ VG EN LP Y NA LQ+++ P ++ V H
Sbjct: 40 WAEIVRVSASAMPTSETVTAGAVAFDRCHEMLWVGCSDGRLTSYLLPTLDKYTSVTSNP--GSIKQLVPTYGGVVAISDHAATIRSRGCVQTHA----------------------------------------------IVVDGARQITCGSLNI-----HDPIKPSDVLLVGTDAGLLSAYDLHGYHPLQPMWFLDLHVSTAALASSD-DSPLICA--------GSSQGRLDFFDGDHRSHRVAASIPLAHSGSIVTIDVMDNYVLTCGISSRSINPYDK--YAPVKIYPDPLVKLFDVRTMSLVSSIPFPSSTGLPPIFVKFHMSENAFYAADAG--GDLVLFD-----MVDPMQYSLVGHL--HPS-VTAFDASLSGELIATGSRDGTVVMYDSGLSTSPRALLDEPEDPLE-FPRPASRPPLTLSPLEPAPASRYVFRPSVDEFGQEITPLSAWLPSTNVDNTFKLNMTLVVAPKPTKVLHPEFEKKVQQKHTIGFTSHRGYD--RNSFVFGKGRATALATVDPRSAE---TTPRRRD---SVSRSIGSAKSFDEADPLWHVPPSYKYTEINMSKHSMDGFVFDFSKHNQSSTHVGFENALPYAYMNAALQLLYATPGVRTLVLAH 587
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|673029066|ref|XP_008868494.1| (hypothetical protein H310_05536 [Aphanomyces invadans] >gi|574476111|gb|ETW03110.1| hypothetical protein H310_05536 [Aphanomyces invadans]) HSP 1 Score: 185.652 bits (470), Expect = 8.025e-46 Identity = 173/631 (27.42%), Postives = 272/631 (43.11%), Query Frame = 0
Query: 34 YMETHRVPSDGYPIT------ALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPM----AAYVGEHVTVGGS----GTH----VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
+ E RV + P + A+AFD E+LWVG +GRL++ P + K+ SV ++P ++Q+ GVV+IS + ++ C+ A V G + TCG+LN+ H P+ VG + + G H +W LDL + + + SP C G + GRL F DG RS + A +G + ++ ++ V G RS+NPYD+ AP ++ PDPL+KLFD+R + + F + P + + A A G +L D D + + H PS A AS SGE++A G+ DG V+ Y + SP A+++ P PLE P PP++++P +P PAS ++FRP+ F P P+++ T + +L V P +V++PE K+ + +G+ +R Y +S ++G A VDPR E RR D V G A D + PP Y+ +I+ S +DG F+F ++N++ VG EN LP Y NA LQ+++ P ++ V H
Sbjct: 40 WAEIVRVSASAMPTSETVTAGAVAFDRCHEMLWVGCSDGRLTSYLLPTLDKYTSVTSNP--GSIKQLVPTYGGVVAISDHAATIRSRGCVQTHA----------------------------------------------IVVDGARQITCGSLNI-----HDPIKPSDVLLVGTDAGLLSAYDLHGYHPLQPMWFLDLHVSTAALASSD-DSPLICA--------GSSQGRLDFFDGDHRSHRVAASIPLAHSGSIVTIDVMDNYVLTCGISSRSINPYDK--YAPVKIYPDPLVKLFDVRTMSLVSSIPFPSSTGLPPIFVKFHMSENAFYAADAG--GDLVLFD-----MVDPMQYSLVGHL--HPSVTA-FDASLSGELIATGSRDGTVVMYDSGLSTSPRALLDEPEDPLE-FPRPASRPPLTLSPLEPAPASRYVFRPSVDEFGQEITPLSAWLPSTNVDNTFKLNMTLVVAPKPTKVLHPEFEKKVQQKHTIGFTSHR--GYDRNSFVFGKGRATALATVDPRSAE---TTPRRRD---SVSRSIGSAKSFDEADPLWHVPPSYKYTEINMSKHSMDGFVFDFSKHNQSSTHVGFENALPYAYMNAALQLLYATPGVRTLVLAH 587
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|595447926|gb|EXX57473.1| (Pan2p [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 160.999 bits (406), Expect = 1.193e-37 Identity = 153/597 (25.63%), Postives = 250/597 (41.88%), Query Frame = 0
Query: 47 ITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDE--NVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEG--------GAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
I+A+AFDP +ELLW G GR+++ G+ ++ S RAH L+PVRQI +GV+ +LC+ ++ N R G + L ++ + +T T P E G H M +++A G+ VV+ +E S M +R + G G + +D R+ + VE ++A TG ++ + T +++ G+ R N L+ DPL+K++D+R +R +P+ F P L + P + + A+ +GQF +CD N +D F+QV S + + S SG MLA G V + + EA +N P+E LP+ PP I T + + + PLL + P+ + V PP + I+P++ M + DF+GY PN G+ + ++ +DG R E E GK D P Y+RV+I +S G+D F+F YN++ GLE + N+Y N++LQ++FF P ++ H
Sbjct: 24 ISAIAFDPYQELLWTGNEKGRVTSHFGSGLHRYTSFRAH--LNPVRQILVSDKGVI---------------SLCS---------------DSVKMTNRR----GLIKWTLSNEDTTDLHCMTYTTMPNSEILAAGK--------QHNMLV-----------------INVARGI-VVKKVESESDIVVMRKSRLICCGANSGEVTLMDP--RTFK-VEHRVQAHTGTISDIDTIGNLLLTCGSSARHGN-----------LIIDPLVKVYDIRTMRPLVPMPFP---TGPCFLKMHPKLSTTVFI--ASRSGQFHVCDIGN--TSDIHFYQV-----NTSSYVNAIDLSASGGMLAFGDAASFVHLWEDRKEAKINAYSNPIE-LPTIQTPPNI-------TTSERSSLSLIGMPYYKEPLL------SVWPSNMR-FEVGNPPPK-IDPDILNNMKMIDFVGYSPNP-----------GNMKRNQVVRYSRKKHKDGTPKFRSEKERELQSGKSSRGPSSLFDNEAELDATSTKMPKYYKRVEIQYSRFGVDDFDFEFYNKSRYAGLETHIANSYCNSLLQVLFFTPVLRLITRSH 505
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|698805588|ref|XP_009835823.1| (hypothetical protein H257_10835 [Aphanomyces astaci] >gi|574109232|gb|ETV74736.1| hypothetical protein H257_10835 [Aphanomyces astaci]) HSP 1 Score: 156.377 bits (394), Expect = 4.408e-36 Identity = 137/440 (31.14%), Postives = 209/440 (47.50%), Query Frame = 0
Query: 209 VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNS-----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPAS---SFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
+W+LDL T + + + SP C G + GRL DG RS + +A +G + +M ++ V G RS+NPYD+ AP ++ PDPL+KLFDLR L S+P + L PS + H Q A G L+ F + + V H PS A + S SGE+ A GT DG V+ Y + P A+V+ P PL+ P PP++++P + PAS ++FRP+ F H + P ++ + T + +L V P +V++PE ++ + +G+ +R Q +S +YGS A VDPR E RR D G A D + + PP Y+ ++ S +DG F+F ++NR+ VGLEN LP Y NA+LQ++F P + + + H
Sbjct: 174 MWKLDLRTATAALASSD-DSPLVCA--------GSSQGRLDMFDGGYRSHRVAASIPQAHSGTIVAMDMMDNYVLTCGVSCRSINPYDK--HAPVKIYPDPLVKLFDLRTMSLVSSIPFPSSSGL-PPSFVKF--HATQ-HAYYAADADGDLLV---FGMADPPPLQYSVAGHLR--PSVTA-LDVSSSGELFASGTGDGSVVVYESGLTAAPPRALVDEPDAPLD-FPGPAARPPLTLSPLETAPASRYVFRPSLNEF-GHEITPLSAWLPALDTAYKLNVTLVVAPKPTKVLHPEFEKQVQQKGTIGFTSHRGVQ--RNSFVYGSGRAAALATVDPRSAE---SPMRRRD------SSIGSAKSFDEADPSWHVPPSYKYTEMHLSKHSMDGYVFDFSKHNRSLTHVGLENSLPFAYMNAVLQLLFATPAVTSTLRTH 579
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|698805592|ref|XP_009835825.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574109234|gb|ETV74738.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 155.606 bits (392), Expect = 6.513e-36 Identity = 137/440 (31.14%), Postives = 209/440 (47.50%), Query Frame = 0
Query: 209 VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNS-----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPAS---SFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
+W+LDL T + + + SP C G + GRL DG RS + +A +G + +M ++ V G RS+NPYD+ AP ++ PDPL+KLFDLR L S+P + L PS + H Q A G L+ F + + V H PS A + S SGE+ A GT DG V+ Y + P A+V+ P PL+ P PP++++P + PAS ++FRP+ F H + P ++ + T + +L V P +V++PE ++ + +G+ +R Q +S +YGS A VDPR E RR D G A D + + PP Y+ ++ S +DG F+F ++NR+ VGLEN LP Y NA+LQ++F P + + + H
Sbjct: 130 MWKLDLRTATAALASSD-DSPLVCA--------GSSQGRLDMFDGGYRSHRVAASIPQAHSGTIVAMDMMDNYVLTCGVSCRSINPYDK--HAPVKIYPDPLVKLFDLRTMSLVSSIPFPSSSGL-PPSFVKF--HATQ-HAYYAADADGDLLV---FGMADPPPLQYSVAGHLR--PSVTA-LDVSSSGELFASGTGDGSVVVYESGLTAAPPRALVDEPDAPLD-FPGPAARPPLTLSPLETAPASRYVFRPSLNEF-GHEITPLSAWLPALDTAYKLNVTLVVAPKPTKVLHPEFEKQVQQKGTIGFTSHRGVQ--RNSFVYGSGRAAALATVDPRSAE---SPMRRRD------SSIGSAKSFDEADPSWHVPPSYKYTEMHLSKHSMDGYVFDFSKHNRSLTHVGLENSLPFAYMNAVLQLLFATPAVTSTLRTH 535 The following BLAST results are available for this feature:
BLAST of EWM29971.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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