EWM29971.1, cds707 (CDS) Nannochloropsis gaditana

Overview
NameEWM29971.1
Unique Namecds707
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:225162..227072 +
Alignment locationCM002456.1:227737..227760 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29971.1
Productpab-dependent poly -specific ribonuclease subunit 2
Orig transcript idgnl|cribi|Naga_100200g3.10020.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:225162..227072 +
CM002456.1supercontigCM002456.1:227737..227760 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinonprotein_ADH-like_supfam
IPR028881PAN2_dom
IPR015943WD40/YVTN_repeat-like_dom
Homology
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|585112572|gb|EWM29971.1| (pab-dependent poly -specific ribonuclease subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 1316.98 bits (3407), Expect = 0.000e+0
Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0
Query:    1 MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD 644
            MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD
Sbjct:    1 MSASFFPPGHQMHMESPPDYEDDQVSTIQGHGTYMETHRVPSDGYPITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRHQYLRFRASESD 644          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|1173952328|gb|OQS00044.1| (PAB-dependent poly(A)-specific ribonuclease subunit 2, partial [Thraustotheca clavata])

HSP 1 Score: 214.927 bits (546), Expect = 1.136e-55
Identity = 181/641 (28.24%), Postives = 290/641 (45.24%), Query Frame = 0
Query:    9 GHQMHMESPPDYEDDQVSTIQGHGTYMETHRV-PSDGYPI-TALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGP--SPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF-----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            G  M M  P  YE         +  + E  RV P++   + TA+AFDP +EL+W G   GR++A   P M+K+ SV ++   S ++QI     GV++IS     + ++ C+      A A                 SR    GH R     K  D  + G          C A     G   HP          +  +   VW +D   G ++     +++ ++C ES+  +  G + G+L   DGSLRS +       A  G + +M    + +   G   RS+NPYD++  AP ++ PDPL+KLFDLR +     + F  +   P         A+      A   G+F L   F+VT      + +P     GP    M+ +  +PSGE+L  G+ DG V+ +    + SP A+++ P VPL   P++   PP++++P +P PAS +LFR T   +     P    LPP    A    +  +L V   P +V+ PE   K+  +D +G+   +      +S LYG    + +  +DPR  +            + +  +   A   D  +    PPRY+  +I  +  G DGF  +F R+N T  VGLEN LP +Y N++LQ+++F+P+++     H
Sbjct:    3 GQMMMMHPPHGYE--YYEQYPDNEEWAEIIRVAPTNANEVCTAVAFDPCQELVWTGFSTGRMTANLLPTMEKYSSVASNS--SAIKQIIPSYNGVIAISNSMAVLRSRGCVHNDTVVAEA-----------------SRAFTSGHLRSFDASKTSDYLLLGN------NAGCVAAYDLQGQLSHP----------IHKTPMPVWSMDFYHGNKIA----ISAMASC-ESSAMICAGSSTGQLDLFDGSLRSHRVEYSIPNAHKGSIVAMDMVGNYILTCGVSARSINPYDKN--APLKIYPDPLVKLFDLRTMGLITSIPFPSSAHLPPSFVRFQALAEGSHFYAADKGGEFYL---FDVTEPRQCHY-IP----VGPLAKNMSAMEIAPSGELLVCGSQDGSVVVFDSTQSTSPRALLDDPIVPLA-FPASYRAPPLALSPLEPAPASRYLFRRTVNDYGEEITPLSAWLPPQMDTALKHQM--TLVVAPKPTKVLLPEFAQKIQQKDNIGF--TQLNGTTQNSFLYGKGKAQVFATIDPRFVD------------KKITHRTAQAKSFDESDPCHVPPRYKYKEIKMNKHGTDGFMFDFARHNATQFVGLENTLPFSYMNSMLQILYFIPQVRQHALMH 574          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|1173950876|gb|OQR98814.1| (hypothetical protein ACHHYP_07866 [Achlya hypogyna])

HSP 1 Score: 208.764 bits (530), Expect = 1.398e-53
Identity = 177/605 (29.26%), Postives = 275/605 (45.45%), Query Frame = 0
Query:   48 TALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGP-----SPMACVAASPSGEMLALGTPDGLVISYTNS----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF-----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            TA+AFD  +EL+W G  NGRL+A   P ++K+ SV ++     ++ I    +G+V+IS       ++ C+       +  + VD  G  G +          GH RP  G K  D  + G          C A     G   HP+      H T     T VW +D   G ++  T   +     M     +  G A G+L   D  LRS +       A  G + SM  +   +   G   RS+NPYD++  AP ++ PDPL+KLFDLR   L QS+P    PA  +PS +   PH A       A   G   L D            + P  +   P       +A +A +PSGE+L  G  DG V+ + +S    P A+++ P   L   P+    PP++++P +P PAS +LFRPT  A+     P    LPP  +  +T     +L V   P +V++P    ++  +  +G+   ++     +S ++G     A+  VDPR  +            + +  +   A   D  +    PPRY+  +I  S  G+DGF  +F ++N TP VGLEN LP +Y NA+LQ+++F+P ++    +H
Sbjct:   49 TAVAFDQCQELVWTGHANGRLTAHLLPTLEKYSSVVSNT--GAIKHIIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVD--GSRGSLTC--------GHLRPYDGHKASDHLLLGN------SVGCVAAYDLQGQLSHPL------HKT----PTPVWSMDFYHGSKIAITALASHEDAPM-----ICAGSATGQLDLFDAGLRSHRVECSIPNAHAGNIVSMDMYGHYIITCGVSARSINPYDKN--APVKIYPDPLVKLFDLRTMGLVQSMPF---PATTSPSFVQFQPH-APGTHFYAANPDGDLYLFD-----------IEDPGQYQYSPVGPLARNVAALAVAPSGELLVTGCNDGTVVLFDSSQAANPRALLDDPLEALA-FPTAYQAPPLALSPLEPAPASRYLFRPTINAYGAPIPPLSSWLPP--NMDSTLKHEVTLVVAPKPIKVLDPTFAGRVQQKGTIGF--TQHGGVLKNSFVFGHGRTAAFTTVDPRFVD------------KKITHRVAQAKSFDESDPCHVPPRYKYKEIRMSKHGMDGFMFDFAKHNATPFVGLENTLPFSYMNALLQLLYFLPSVRGHALQH 580          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|813102817|ref|XP_012193937.1| (hypothetical protein SPRG_00453 [Saprolegnia parasitica CBS 223.65] >gi|641541864|gb|KDO35609.1| hypothetical protein SPRG_00453 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 203.371 bits (516), Expect = 1.213e-51
Identity = 180/597 (30.15%), Postives = 272/597 (45.56%), Query Frame = 0
Query:   52 FDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDE-RGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTC-GALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEA---VVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPT----HLAFPP-HPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            FDP +E+LW G  NGRL+A   P ++K+ SV ++     ++ +    +G+V+IS       ++ C+       +  + VD  RG               GH RP    K  D  + G        +   G L+ PL  H  PM                VW +D   G ++  T   +     M     M  G A G+L   D SLRS +       A  G + SM      +   G   RS+NPYD++  AP ++ PDPLIKLFD+R   L QS+P    P   +PS +   PH   +    G+     +L    F++T  + A +Q       G +  A   AS SGE+LALG PDG V+ + +S  +    +   P+     P++   PP++++P +P PAS +LFRPT      A PP    LPP         V  +L V   P +V++P    ++  +D +G+   ++   P +S +YG     A   VDPR  +            + V  +   A   D  +    PPRY+  +I  S  G+DGF  +F ++N T  VGLEN LP +Y NA+LQ+++FVPE++A    H
Sbjct:   50 FDPCQEVLWTGHANGRLTAHLLPTLEKYSSVISNA--GAIKTLIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVDHSRGA-----------LTCGHLRPYDSNKPNDHLLLGNSAGCVAAYDLQGQLSHPL--HKTPMP---------------VWSMDFYHGSKIAITALASHEDAPM-----MCAGSATGQLDLFDSSLRSHRVECSIPNAHAGNIVSMDMHGHYILTCGVSARSINPYDKN--APVKVYPDPLIKLFDVRTMGLVQSMPF---PGAASPSYVHFQPHAQGSHYYAGSRDGDLYL----FDIT--EPASYQYTPLGPLGTNASAMAFAS-SGELLALGAPDGGVVLFDSSQASNPKALLDDPLLPLAFPASFQAPPLALSPLEPAPASRYLFRPTINDYGEAIPPLSSWLPPHMDSTLKHEV--TLVVAPKPTKVLDPTFAARIQQKDTIGF--TQHGGVPKNSFVYGQGRVAAVATVDPRFVD------------KKVTHRTASAKSFDESDPCHVPPRYKYKEIKMSKHGMDGFMFDFAKHNATRFVGLENSLPFSYINALLQLLYFVPELRAHALLH 577          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|669143472|ref|XP_008607298.1| (hypothetical protein SDRG_03442 [Saprolegnia diclina VS20] >gi|530740995|gb|EQC39237.1| hypothetical protein SDRG_03442 [Saprolegnia diclina VS20])

HSP 1 Score: 201.83 bits (512), Expect = 3.527e-51
Identity = 178/597 (29.82%), Postives = 271/597 (45.39%), Query Frame = 0
Query:   52 FDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDE-RGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTC-GALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEA---VVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPT----HLAFPP-HPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR-PPRYRRVQIDFSVRGLDGF--EFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            FDP +E+LW G  NGRL+A   P ++K+ SV ++     ++ +    +G+V+IS       ++ C+       +  + VD  RG               GH RP    K  D  + G        +   G L+ PL  H  PM                VW +D   G ++  T   +     M     M  G A G+L   D SLRS +       A  G + SM      +   G   RS+NPYD++  AP ++ PDPLIKLFD+R   L QS+P    P   +PS +   PH   +    G+  +  +L    F++T   +  +Q       G +  A   AS SGE+LALG PDG V+ Y +S  +    +   P+     P++   PP++++P +P PAS +LFRPT      A PP    LPP         V  +L V   P +V++P    ++  +D +G+   ++   P +S +YG     A   VDPR  +            + +  +   A   D  +    PPRY+  +I  S  G+DGF  +F ++N T  VGLEN LP +Y NA+LQ+++FVPE++     H
Sbjct:   50 FDPCQEVLWTGHANGRLTAHLLPTLEKYSSVISNA--GAIKTLIPCYDGIVAISKSMAVFRSRGCVH------NDTVAVDHSRGA-----------LTCGHLRPYDSNKPNDHLLLGNSLGCVAAYDLQGQLSHPL--HKTPMP---------------VWSMDFYHGSKIAITALASHDDAPM-----MCAGSATGQLDLFDSSLRSHRVECSIPNAHAGNIVSMDMHGHYILTCGVSARSINPYDKN--APVKVYPDPLIKLFDVRTMGLVQSMPF---PGAASPSYVQFQPHAQGSHYYAGSRDSDLYL----FDITEPGS--YQYTPLGPLGANASAMTFAS-SGELLALGAPDGGVVLYDSSQASNPKALLDDPLLPLAFPASFQAPPLALSPLEPAPASRYLFRPTINDYGEAIPPLSSWLPPHMDSTLKHEV--TLVVAPKPTKVLDPNFAARIQQKDTIGF--TQHGGVPKNSFVYGQGRSAAVATVDPRFVD------------KKMTHRTASAKSFDESDPCHVPPRYKYKEIKMSKHGMDGFMFDFAKHNGTRFVGLENSLPFSYINALLQLLYFVPELRTHALLH 577          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|673029068|ref|XP_008868495.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574476112|gb|ETW03111.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 186.037 bits (471), Expect = 5.089e-46
Identity = 172/631 (27.26%), Postives = 272/631 (43.11%), Query Frame = 0
Query:   34 YMETHRVPSDGYPIT------ALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPM----AAYVGEHVTVGGS----GTH----VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            + E  RV +   P +      A+AFD   E+LWVG  +GRL++   P + K+ SV ++P    ++Q+     GVV+IS     + ++ C+   A                                               V  G  + TCG+LN+     H P+       VG    +  +    G H    +W LDL      + + +  SP  C         G + GRL F DG  RS +       A +G + ++   ++ V   G   RS+NPYD+   AP ++ PDPL+KLFD+R +     + F  +   P +      +  A     A   G  +L D       D   + +  H    PS +    AS SGE++A G+ DG V+ Y    + SP A+++ P  PLE  P     PP++++P +P PAS ++FRP+   F     P     P+++   T  +  +L V   P +V++PE   K+  +  +G+  +R Y    +S ++G     A   VDPR  E      RR D    V    G A   D  +     PP Y+  +I+ S   +DG  F+F ++N++   VG EN LP  Y NA LQ+++  P ++  V  H
Sbjct:   40 WAEIVRVSASAMPTSETVTAGAVAFDRCHEMLWVGCSDGRLTSYLLPTLDKYTSVTSNP--GSIKQLVPTYGGVVAISDHAATIRSRGCVQTHA----------------------------------------------IVVDGARQITCGSLNI-----HDPIKPSDVLLVGTDAGLLSAYDLHGYHPLQPMWFLDLHVSTAALASSD-DSPLICA--------GSSQGRLDFFDGDHRSHRVAASIPLAHSGSIVTIDVMDNYVLTCGISSRSINPYDK--YAPVKIYPDPLVKLFDVRTMSLVSSIPFPSSTGLPPIFVKFHMSENAFYAADAG--GDLVLFD-----MVDPMQYSLVGHL--HPS-VTAFDASLSGELIATGSRDGTVVMYDSGLSTSPRALLDEPEDPLE-FPRPASRPPLTLSPLEPAPASRYVFRPSVDEFGQEITPLSAWLPSTNVDNTFKLNMTLVVAPKPTKVLHPEFEKKVQQKHTIGFTSHRGYD--RNSFVFGKGRATALATVDPRSAE---TTPRRRD---SVSRSIGSAKSFDEADPLWHVPPSYKYTEINMSKHSMDGFVFDFSKHNQSSTHVGFENALPYAYMNAALQLLYATPGVRTLVLAH 587          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|673029066|ref|XP_008868494.1| (hypothetical protein H310_05536 [Aphanomyces invadans] >gi|574476111|gb|ETW03110.1| hypothetical protein H310_05536 [Aphanomyces invadans])

HSP 1 Score: 185.652 bits (470), Expect = 8.025e-46
Identity = 173/631 (27.42%), Postives = 272/631 (43.11%), Query Frame = 0
Query:   34 YMETHRVPSDGYPIT------ALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDENVTGTVRPGQEEFTCGALNVPLGHHHHPM----AAYVGEHVTVGGS----GTH----VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISY----TNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAF----PPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            + E  RV +   P +      A+AFD   E+LWVG  +GRL++   P + K+ SV ++P    ++Q+     GVV+IS     + ++ C+   A                                               V  G  + TCG+LN+     H P+       VG    +  +    G H    +W LDL      + + +  SP  C         G + GRL F DG  RS +       A +G + ++   ++ V   G   RS+NPYD+   AP ++ PDPL+KLFD+R +     + F  +   P +      +  A     A   G  +L D       D   + +  H    PS  A   AS SGE++A G+ DG V+ Y    + SP A+++ P  PLE  P     PP++++P +P PAS ++FRP+   F     P     P+++   T  +  +L V   P +V++PE   K+  +  +G+  +R   Y  +S ++G     A   VDPR  E      RR D    V    G A   D  +     PP Y+  +I+ S   +DG  F+F ++N++   VG EN LP  Y NA LQ+++  P ++  V  H
Sbjct:   40 WAEIVRVSASAMPTSETVTAGAVAFDRCHEMLWVGCSDGRLTSYLLPTLDKYTSVTSNP--GSIKQLVPTYGGVVAISDHAATIRSRGCVQTHA----------------------------------------------IVVDGARQITCGSLNI-----HDPIKPSDVLLVGTDAGLLSAYDLHGYHPLQPMWFLDLHVSTAALASSD-DSPLICA--------GSSQGRLDFFDGDHRSHRVAASIPLAHSGSIVTIDVMDNYVLTCGISSRSINPYDK--YAPVKIYPDPLVKLFDVRTMSLVSSIPFPSSTGLPPIFVKFHMSENAFYAADAG--GDLVLFD-----MVDPMQYSLVGHL--HPSVTA-FDASLSGELIATGSRDGTVVMYDSGLSTSPRALLDEPEDPLE-FPRPASRPPLTLSPLEPAPASRYVFRPSVDEFGQEITPLSAWLPSTNVDNTFKLNMTLVVAPKPTKVLHPEFEKKVQQKHTIGFTSHR--GYDRNSFVFGKGRATALATVDPRSAE---TTPRRRD---SVSRSIGSAKSFDEADPLWHVPPSYKYTEINMSKHSMDGFVFDFSKHNQSSTHVGFENALPYAYMNAALQLLYATPGVRTLVLAH 587          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|595447926|gb|EXX57473.1| (Pan2p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 160.999 bits (406), Expect = 1.193e-37
Identity = 153/597 (25.63%), Postives = 250/597 (41.88%), Query Frame = 0
Query:   47 ITALAFDPIEELLWVGTGNGRLSALAQPGMQKHVSVRAHPLLSPVRQIRCFGEGVVSISGRQVQMHNKNCLALCAAPASAMLGVDERGQEGDIESVNSRPKGGGHGRPALGKKEEDE--NVTGTVRPGQEEFTCGALNVPLGHHHHPMAAYVGEHVTVGGSGTHVWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRMLRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNSPEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPASSFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEG--------GAGREDTGEDARPPRYRRVQIDFSVRGLDGFEFGRYNRTPLVGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            I+A+AFDP +ELLW G   GR+++    G+ ++ S RAH  L+PVRQI    +GV+               +LC+                 ++  N R    G  +  L  ++  +   +T T  P  E    G          H M                   +++A G+ VV+ +E  S    M  +R +  G   G +  +D   R+ + VE  ++A TG ++ + T  +++   G+  R  N           L+ DPL+K++D+R +R  +P+ F      P  L + P  +    +  A+ +GQF +CD  N   +D  F+QV        S +  +  S SG MLA G     V  + +  EA +N    P+E LP+   PP I       T +         + +   PLL      +  P+ +    V  PP + I+P++   M + DF+GY PN            G+  +        ++ +DG    R E   E   GK               D      P  Y+RV+I +S  G+D F+F  YN++   GLE  + N+Y N++LQ++FF P ++     H
Sbjct:   24 ISAIAFDPYQELLWTGNEKGRVTSHFGSGLHRYTSFRAH--LNPVRQILVSDKGVI---------------SLCS---------------DSVKMTNRR----GLIKWTLSNEDTTDLHCMTYTTMPNSEILAAGK--------QHNMLV-----------------INVARGI-VVKKVESESDIVVMRKSRLICCGANSGEVTLMDP--RTFK-VEHRVQAHTGTISDIDTIGNLLLTCGSSARHGN-----------LIIDPLVKVYDIRTMRPLVPMPFP---TGPCFLKMHPKLSTTVFI--ASRSGQFHVCDIGN--TSDIHFYQV-----NTSSYVNAIDLSASGGMLAFGDAASFVHLWEDRKEAKINAYSNPIE-LPTIQTPPNI-------TTSERSSLSLIGMPYYKEPLL------SVWPSNMR-FEVGNPPPK-IDPDILNNMKMIDFVGYSPNP-----------GNMKRNQVVRYSRKKHKDGTPKFRSEKERELQSGKSSRGPSSLFDNEAELDATSTKMPKYYKRVEIQYSRFGVDDFDFEFYNKSRYAGLETHIANSYCNSLLQVLFFTPVLRLITRSH 505          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|698805588|ref|XP_009835823.1| (hypothetical protein H257_10835 [Aphanomyces astaci] >gi|574109232|gb|ETV74736.1| hypothetical protein H257_10835 [Aphanomyces astaci])

HSP 1 Score: 156.377 bits (394), Expect = 4.408e-36
Identity = 137/440 (31.14%), Postives = 209/440 (47.50%), Query Frame = 0
Query:  209 VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNS-----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPAS---SFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            +W+LDL T    + + +  SP  C         G + GRL   DG  RS +      +A +G + +M   ++ V   G   RS+NPYD+   AP ++ PDPL+KLFDLR   L  S+P   +  L  PS +    H  Q      A   G  L+   F +       + V  H    PS  A +  S SGE+ A GT DG V+ Y +      P A+V+ P  PL+  P     PP++++P +  PAS ++FRP+   F  H + P ++   +  T   +  +L V   P +V++PE   ++  +  +G+  +R  Q   +S +YGS    A   VDPR  E      RR D         G A   D  + +   PP Y+  ++  S   +DG  F+F ++NR+   VGLEN LP  Y NA+LQ++F  P + + +  H
Sbjct:  174 MWKLDLRTATAALASSD-DSPLVCA--------GSSQGRLDMFDGGYRSHRVAASIPQAHSGTIVAMDMMDNYVLTCGVSCRSINPYDK--HAPVKIYPDPLVKLFDLRTMSLVSSIPFPSSSGL-PPSFVKF--HATQ-HAYYAADADGDLLV---FGMADPPPLQYSVAGHLR--PSVTA-LDVSSSGELFASGTGDGSVVVYESGLTAAPPRALVDEPDAPLD-FPGPAARPPLTLSPLETAPASRYVFRPSLNEF-GHEITPLSAWLPALDTAYKLNVTLVVAPKPTKVLHPEFEKQVQQKGTIGFTSHRGVQ--RNSFVYGSGRAAALATVDPRSAE---SPMRRRD------SSIGSAKSFDEADPSWHVPPSYKYTEMHLSKHSMDGYVFDFSKHNRSLTHVGLENSLPFAYMNAVLQLLFATPAVTSTLRTH 579          
BLAST of EWM29971.1 vs. NCBI_GenBank
Match: gi|698805592|ref|XP_009835825.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574109234|gb|ETV74738.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 155.606 bits (392), Expect = 6.513e-36
Identity = 137/440 (31.14%), Postives = 209/440 (47.50%), Query Frame = 0
Query:  209 VWELDLATGLRVVRTLEVASPSTCMESNRAMVIGGADGRLRFLDGSLRSGQAVERDLEAFTGPVTSMCTWNDMVAATGTQGRSLNPYDRSGRAPTRLLPDPLIKLFDLRM--LRQSLPLSFAPALVAPSLLTLLPHTAQARLVVGAATTGQFLLCDPFNVTAADTAFFQVPNHHTGGPSPMACVAASPSGEMLALGTPDGLVISYTNS-----PEAVVNRPPVPLEILPSTPPPPPISIAPNDPTPASHFLFRPTHLAFPPHPLLPPAS---SFATTPAVLSSLPVRVPPARVINPELYTKMSVQDFLGYVPNRYYQYPAHSLLYGSAGKEAYRVVDPRRKEDGAEAGRREDPGEDVGGKEGGAGREDTGEDAR--PPRYRRVQIDFSVRGLDG--FEFGRYNRTPL-VGLENVLPNTYTNAILQMMFFVPEMKAAVCRH 633
            +W+LDL T    + + +  SP  C         G + GRL   DG  RS +      +A +G + +M   ++ V   G   RS+NPYD+   AP ++ PDPL+KLFDLR   L  S+P   +  L  PS +    H  Q      A   G  L+   F +       + V  H    PS  A +  S SGE+ A GT DG V+ Y +      P A+V+ P  PL+  P     PP++++P +  PAS ++FRP+   F  H + P ++   +  T   +  +L V   P +V++PE   ++  +  +G+  +R  Q   +S +YGS    A   VDPR  E      RR D         G A   D  + +   PP Y+  ++  S   +DG  F+F ++NR+   VGLEN LP  Y NA+LQ++F  P + + +  H
Sbjct:  130 MWKLDLRTATAALASSD-DSPLVCA--------GSSQGRLDMFDGGYRSHRVAASIPQAHSGTIVAMDMMDNYVLTCGVSCRSINPYDK--HAPVKIYPDPLVKLFDLRTMSLVSSIPFPSSSGL-PPSFVKF--HATQ-HAYYAADADGDLLV---FGMADPPPLQYSVAGHLR--PSVTA-LDVSSSGELFASGTGDGSVVVYESGLTAAPPRALVDEPDAPLD-FPGPAARPPLTLSPLETAPASRYVFRPSLNEF-GHEITPLSAWLPALDTAYKLNVTLVVAPKPTKVLHPEFEKQVQQKGTIGFTSHRGVQ--RNSFVYGSGRAAALATVDPRSAE---SPMRRRD------SSIGSAKSFDEADPSWHVPPSYKYTEMHLSKHSMDGYVFDFSKHNRSLTHVGLENSLPFAYMNAVLQLLFATPAVTSTLRTH 535          
The following BLAST results are available for this feature:
BLAST of EWM29971.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112572|gb|EWM29971.1|0.000e+0100.00pab-dependent poly -specific ribonuclease subunit ... [more]
gi|1173952328|gb|OQS00044.1|1.136e-5528.24PAB-dependent poly(A)-specific ribonuclease subuni... [more]
gi|1173950876|gb|OQR98814.1|1.398e-5329.26hypothetical protein ACHHYP_07866 [Achlya hypogyna... [more]
gi|813102817|ref|XP_012193937.1|1.213e-5130.15hypothetical protein SPRG_00453 [Saprolegnia paras... [more]
gi|669143472|ref|XP_008607298.1|3.527e-5129.82hypothetical protein SDRG_03442 [Saprolegnia dicli... [more]
gi|673029068|ref|XP_008868495.1|5.089e-4627.26hypothetical protein, variant 1 [Aphanomyces invad... [more]
gi|673029066|ref|XP_008868494.1|8.025e-4627.42hypothetical protein H310_05536 [Aphanomyces invad... [more]
gi|595447926|gb|EXX57473.1|1.193e-3725.63Pan2p [Rhizophagus irregularis DAOM 197198w][more]
gi|698805588|ref|XP_009835823.1|4.408e-3631.14hypothetical protein H257_10835 [Aphanomyces astac... [more]
gi|698805592|ref|XP_009835825.1|6.513e-3631.14hypothetical protein, variant 2 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna707rna707Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications