EWM23609.1, cds7063 (CDS) Nannochloropsis gaditana

Overview
NameEWM23609.1
Unique Namecds7063
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:397923..397975 +
Alignment locationCM002470.1:398198..398377 +
Alignment locationCM002470.1:398586..398666 +
Alignment locationCM002470.1:398868..399102 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23609.1
ProductProtein of unknown function DUF775
Orig transcript idgnl|cribi|Naga_100550g3.5013.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:397923..397975 +
CM002470.1supercontigCM002470.1:398198..398377 +
CM002470.1supercontigCM002470.1:398586..398666 +
CM002470.1supercontigCM002470.1:398868..399102 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008493DUF775
Homology
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|585104756|gb|EWM23609.1| (Protein of unknown function DUF775 [Nannochloropsis gaditana])

HSP 1 Score: 376.711 bits (966), Expect = 2.990e-132
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTGN 182
            MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTGN
Sbjct:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTGN 182          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|1214710437|gb|OWZ21527.1| (hypothetical protein PHMEG_0003922 [Phytophthora megakarya])

HSP 1 Score: 187.578 bits (475), Expect = 1.958e-57
Identity = 87/179 (48.60%), Postives = 120/179 (67.04%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFK 179
            +A FG+V  GRPV+ D+R I    +V +I  P QVTDLTFFLLP   +PPG G  LY+++P    W VLG +  +KPS +FRT W T   +   PA+QLGVS+ESLD + NL ++ SG++ER+ FA KIAQDL++++ SF+    Q     + +P N +D W+ERF+ KYR DP+FM K
Sbjct:    8 IAQFGLVIAGRPVITDFREIGPAHYVVDIIEPTQVTDLTFFLLPGSPVPPGFGAVLYFAVPALQNWQVLGTVFAEKPSAIFRTSWPTHPDVVGQPALQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFNYLSSFSTSNNQ---SYMTIPTNLLDRWMERFEAKYRRDPNFMMK 183          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|669137306|ref|XP_008604221.1| (hypothetical protein SDRG_00519 [Saprolegnia diclina VS20] >gi|530744556|gb|EQC42798.1| hypothetical protein SDRG_00519 [Saprolegnia diclina VS20])

HSP 1 Score: 187.193 bits (474), Expect = 2.397e-57
Identity = 85/181 (46.96%), Postives = 123/181 (67.96%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTG 181
            MA FG+V  GRPV+ D+  I+ T+FV ++  P QVTD+TFFLLP+  +PPG    LY+++P    W +LG++  +KPS +FRT W T   +A  P IQ+GVS+E +D + NL ++ SG+ ER+ FAHKIA DL++F+ SF+  T    R  +++P N +D W+ERF+ KYR DP+FM K  
Sbjct:    1 MAQFGMVIAGRPVVTDFAEISPTQFVVDVPYPEQVTDITFFLLPHSPVPPGYAAVLYFAVPHLQNWQLLGSVFAEKPSAIFRTSWPTHPDVANQPIIQVGVSIEPVDNVKNLGIEASGLTERKAFAHKIAVDLFNFMSSFSTSTD---RSLMVIPTNLLDRWIERFEAKYRRDPNFMMKAS 178          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|695455847|ref|XP_009536811.1| (hypothetical protein PHYSODRAFT_262726 [Phytophthora sojae] >gi|348667420|gb|EGZ07245.1| hypothetical protein PHYSODRAFT_262726 [Phytophthora sojae])

HSP 1 Score: 186.808 bits (473), Expect = 3.692e-57
Identity = 86/179 (48.04%), Postives = 120/179 (67.04%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFK 179
            +A FG+V  GRPV+ D+R I    +V +I  P QVTDLTFFLLP   +PPG G  LY+++P    W +LG +  +KPS +FRT W T   +   P +QLGVS+ESLD + NL ++ SG++ER+ FA KIAQDL++++ SF+  T Q     + +P N +D W+ERF+ KYR DP+FM K
Sbjct:    7 IAQFGLVIAGRPVITDFREIGPAHYVVDIVEPTQVTDLTFFLLPGSPVPPGFGAVLYFAVPALQNWQLLGTVFTEKPSAIFRTSWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFNYLSSFSTSTNQ---SYMTIPTNLLDKWMERFEAKYRRDPNFMMK 182          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|1173930846|gb|OQR83460.1| (hypothetical protein ACHHYP_14674 [Achlya hypogyna])

HSP 1 Score: 186.422 bits (472), Expect = 4.516e-57
Identity = 84/181 (46.41%), Postives = 123/181 (67.96%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTG 181
            MA FG+V  GRPV+ D+  I+ T++V ++  P QVTD+TFFLLP   +PPG    LY+++P    W +LG++  +KPS +FRT W T   +A  P +QLGVS+E +D + NL ++ SG++ER+ FAHKIA DL++F+ SF+  T    R  +++P N +D W+ERF+ KYR DP+FM K  
Sbjct:    1 MAQFGMVIAGRPVVTDFAEISPTQYVVDVLYPQQVTDITFFLLPQSPVPPGYAAVLYFAVPHLQNWQLLGSVFAEKPSAIFRTSWPTHPDVANQPVLQLGVSIEPVDNVKNLGIEASGLEERKSFAHKIALDLFNFMSSFSTSTD---RSLMVIPTNLLDRWMERFEAKYRRDPNFMMKAS 178          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|1173954959|gb|OQS02059.1| (hypothetical protein THRCLA_05538 [Thraustotheca clavata])

HSP 1 Score: 186.037 bits (471), Expect = 6.267e-57
Identity = 84/179 (46.93%), Postives = 124/179 (69.27%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFK 179
            MA FG+V  GRPV+ D+  ++ T++V +I  PAQVTD+TFFLLP+  +PPG    LY+++P    W +LG++  +KPS +FRT W T   +   P +QLG+S+ESL  + NL +++SG+ ER+ FAHKIA DL++F+ SF+  T    R  +++P N +D W+ERF+ KYR DP+FM K
Sbjct:    1 MAQFGMVIAGRPVLTDFAELSPTQYVIDIPYPAQVTDITFFLLPHSPVPPGFAAVLYFAVPQLQNWQLLGSVFAEKPSAIFRTSWPTHPDVVNQPVVQLGISIESLANVKNLGIEESGLMERKAFAHKIALDLFNFMSSFSTSTD---RSLMVIPTNLLDRWMERFEAKYRRDPNFMMK 176          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|298707409|emb|CBJ30038.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 181.415 bits (459), Expect = 6.330e-55
Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = 0
Query:    4 FGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLP-----PFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFK 179
            FG++ PGRPV+ ++R I+ +K V EI +P +V +L FFLLP   +PPG    LY+S+P      F  W VLGAL   KPSGVFRTGW T E +     +QLGVS+ES DT TNL L   GV +R+ FA KIA+DL+ F+ SF+Q T Q G E +++P N +D W+ RF+ KY  DP+FM K
Sbjct:    9 FGIIVPGRPVIPEFRAIDSSKCVTEIVTPREVDELVFFLLPTSPVPPGQTAVLYFSVPTATTGAFEHWEVLGALAASKPSGVFRTGWPTNEQMQSCGVVQLGVSIESADTATNLGLCAGGVQDRKNFALKIAKDLFQFMSSFSQST-QAGPELMVVPTNVLDRWILRFESKYNRDPNFMLK 188          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|301110516|ref|XP_002904338.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096464|gb|EEY54516.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 175.637 bits (444), Expect = 8.643e-53
Identity = 86/180 (47.78%), Postives = 119/180 (66.11%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKT 180
            +A FG+V  GRPV+ D+R I    +V +I  P QVTDLTFFLLP   +PPG G  LY++LP    W +LG +  +KPS +FRT W T   +   P +QLGVS+ESLD + NL ++ SG++ER+ FA KIAQDL++++ SF+    Q     + +P N +D W+ERF+ KYR DP+FM K 
Sbjct:    8 IAQFGLVIAGRPVITDFREIGPAHYVVDILEPTQVTDLTFFLLPGSPVPPGFGAVLYFALPALQNWQLLGTVFAEKPSAIFRTSWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFNYLSSFSSSNSQ---SYMTIPTNLLDKWMERFEAKYRRDPNFMMKN 184          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|953490784|emb|CEG46438.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 174.866 bits (442), Expect = 1.875e-52
Identity = 85/180 (47.22%), Postives = 121/180 (67.22%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKT 180
            +A FG+V  GRPV+ D+  I    +V +I  P QVTDLTFFLLP+  + PG G  LY+++P    W +LG +  +KPS +FRT W T   +   P +QLGVS+ESLD + NL ++ SG++ER+ FA KIAQDL++++ SF+  + QG    + +P N +D W+ERF+ KYR DP+FM KT
Sbjct:    8 IAQFGLVIAGRPVITDFCGIGPAHYVVDILEPTQVTDLTFFLLPSSPVAPGYGAVLYFAVPALQNWQLLGTVFAEKPSAIFRTSWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFNYLSSFSSSSSQG---YMTIPTNLLDKWMERFEAKYRRDPNFMMKT 184          
BLAST of EWM23609.1 vs. NCBI_GenBank
Match: gi|698783607|ref|XP_009824847.1| (hypothetical protein H257_02755 [Aphanomyces astaci] >gi|574120897|gb|ETV86375.1| hypothetical protein H257_02755 [Aphanomyces astaci])

HSP 1 Score: 171.014 bits (432), Expect = 4.379e-51
Identity = 83/181 (45.86%), Postives = 121/181 (66.85%), Query Frame = 0
Query:    1 MASFGVVCPGRPVMVDWRPINETKFVCEIASPAQVTDLTFFLLPNIVLPPGTGTALYYSLPPFAEWTVLGALTLDKPSGVFRTGWSTIEGIAQMPAIQLGVSLESLDTITNLDLQKSGVDERRLFAHKIAQDLWSFVCSFAQQTQQGGREAVLLPANAMDMWLERFDRKYRLDPSFMFKTG 181
            +A FG V  GRPV+ D+  I+ T+FV +I  P QVTD+TFF+LP   +PPG    LY+++P    W +LG +  +KPS +FRT W T   +   P IQLGVS+ES++++ NL ++ SG++ER+ FA KIAQDL++F+ SF+  T       +++P N +D W+ERF+ KYR DP+FM K  
Sbjct:    2 VAQFGTVIAGRPVITDYIEISPTQFVIDIPYPEQVTDITFFMLPQSPVPPGFAAVLYFAVPHLQNWQLLGGVFAEKPSAIFRTAWPTHPDVVGQPVIQLGVSIESVESVRNLGIEASGLEERKSFALKIAQDLFNFMTSFSTSTNS---SMMVVPTNLLDRWMERFESKYRRDPNFMMKNN 179          
The following BLAST results are available for this feature:
BLAST of EWM23609.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104756|gb|EWM23609.1|2.990e-132100.00Protein of unknown function DUF775 [Nannochloropsi... [more]
gi|1214710437|gb|OWZ21527.1|1.958e-5748.60hypothetical protein PHMEG_0003922 [Phytophthora m... [more]
gi|669137306|ref|XP_008604221.1|2.397e-5746.96hypothetical protein SDRG_00519 [Saprolegnia dicli... [more]
gi|695455847|ref|XP_009536811.1|3.692e-5748.04hypothetical protein PHYSODRAFT_262726 [Phytophtho... [more]
gi|1173930846|gb|OQR83460.1|4.516e-5746.41hypothetical protein ACHHYP_14674 [Achlya hypogyna... [more]
gi|1173954959|gb|OQS02059.1|6.267e-5746.93hypothetical protein THRCLA_05538 [Thraustotheca c... [more]
gi|298707409|emb|CBJ30038.1|6.330e-5550.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|301110516|ref|XP_002904338.1|8.643e-5347.78conserved hypothetical protein [Phytophthora infes... [more]
gi|953490784|emb|CEG46438.1|1.875e-5247.22Uncharacterized conserved protein [Plasmopara hals... [more]
gi|698783607|ref|XP_009824847.1|4.379e-5145.86hypothetical protein H257_02755 [Aphanomyces astac... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7080rna7080Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications