EWM23625.1, cds7053 (CDS) Nannochloropsis gaditana

Overview
NameEWM23625.1
Unique Namecds7053
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:376617..376848 +
Alignment locationCM002470.1:377098..378284 +

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Properties
Property NameValue
Protein idEWM23625.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100137g6.27.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:376617..376848 +
CM002470.1supercontigCM002470.1:377098..378284 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23625.1 vs. NCBI_GenBank
Match: gi|585104776|gb|EWM23625.1| (hypothetical protein Naga_100137g6 [Nannochloropsis gaditana])

HSP 1 Score: 935.636 bits (2417), Expect = 0.000e+0
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0 
Query:    1 MTGLNCCRESNRSFCSNNDSCNLSSTASKCRQGRRKAHLRCHVPVIGTRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKNVGKPKASVRKAKTKPGLGGKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK 472
            MTGLNCCRESNRSFCSNNDSCNLSSTASKCRQGRRKAHLRCHVPVIGTRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKNVGKPKASVRKAKTKPGLGGKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK
Sbjct:    1 MTGLNCCRESNRSFCSNNDSCNLSSTASKCRQGRRKAHLRCHVPVIGTRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKNVGKPKASVRKAKTKPGLGGKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK 472
[Close]
BLAST of EWM23625.1 vs. NCBI_GenBank
Match: gi|553180649|ref|XP_005853438.1| (hypothetical protein NGA_0427100 [Nannochloropsis gaditana CCMP526] >gi|422295620|gb|EKU22919.1| hypothetical protein NGA_0427100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0
Identity = 423/426 (99.30%), Postives = 424/426 (99.53%), Query Frame = 0 
Query:   48 TRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKNVGKPKASVRKAKTKPGLG-GKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK 472
            TRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKN+GKPKASVRKA TKPGLG GKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK
Sbjct:   12 TRPFLLLLLFPLINLVAPTHGAKLWKLPLTNPLQWLRPGGDTRHLQATVRALESELSRLRTLHTAHLDELRRLRAKRAEDFARFREAGKQQAAENERVREAAVQALARAQEKEDRIEEELERERKRWRTEAETAIGQAVREAVEEERRKGKEVVGRLESALAAARAAGANEEEEREKEDEGLRALQEAFEKERRQFKKRLGAERELVEVTLAREEKLQQVILKLEASNHALKAEVGQLTEGKEGKEVKVPIESRDQVLTDRPAATVSETRAPSATSPPVPAPPQSPVTAGRIKTSNTKMVEECGSASAPPASVSSTVADPSLPSPNTSSSHSSSKSKSSPSGARKLKNIGKPKASVRKATTKPGLGAGKMETAPAKKKKATTSRPSSSSASSLPASSGSGRASAARPGRQPVTPTLKKGGLGAPHK 437
The following BLAST results are available for this feature:
BLAST of EWM23625.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104776|gb|EWM23625.1|0.000e+0100.00hypothetical protein Naga_100137g6 [Nannochloropsi... [more]
gi|553180649|ref|XP_005853438.1|0.000e+099.30hypothetical protein NGA_0427100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7070rna7070Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications