EWM23621.1, cds7045 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|585104772|gb|EWM23621.1| (trna pseudouridine synthase 3 [Nannochloropsis gaditana]) HSP 1 Score: 1586.62 bits (4107), Expect = 0.000e+0 Identity = 764/764 (100.00%), Postives = 764/764 (100.00%), Query Frame = 0
Query: 1 MPSPCINIKSRAFTAQGCMKTAQGHVEGPAPESCTGLDQDAHLPFQSPSPPLPQDLTRSQLYSMLRHIQEQTDGKALVGHALHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGELAVRKAALDGWVDAELGMGRFQGSRFQKQEKKKKGKRREAGGGEGAGTAGGGGGEGGSKTCEAMNNESGSVHGVSDRGGEAEDEKSVGKKEDTVLMTWRDALAYLSAQGIVPDLEVSKKKKGIWTPYVPLKDRPLGKTYEEAVLGMGTKKRELYEQAQRKRKAAETKGGMEAFFHNMRGTSPGPSLSSSGRKSPHDKNVINDDVSAAKRKPHRTSDSELNRLNHLAASSSHDGANINSQARSENDLLSHKGLGHGGKSAVQHATAWPN 764
MPSPCINIKSRAFTAQGCMKTAQGHVEGPAPESCTGLDQDAHLPFQSPSPPLPQDLTRSQLYSMLRHIQEQTDGKALVGHALHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGELAVRKAALDGWVDAELGMGRFQGSRFQKQEKKKKGKRREAGGGEGAGTAGGGGGEGGSKTCEAMNNESGSVHGVSDRGGEAEDEKSVGKKEDTVLMTWRDALAYLSAQGIVPDLEVSKKKKGIWTPYVPLKDRPLGKTYEEAVLGMGTKKRELYEQAQRKRKAAETKGGMEAFFHNMRGTSPGPSLSSSGRKSPHDKNVINDDVSAAKRKPHRTSDSELNRLNHLAASSSHDGANINSQARSENDLLSHKGLGHGGKSAVQHATAWPN
Sbjct: 1 MPSPCINIKSRAFTAQGCMKTAQGHVEGPAPESCTGLDQDAHLPFQSPSPPLPQDLTRSQLYSMLRHIQEQTDGKALVGHALHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGELAVRKAALDGWVDAELGMGRFQGSRFQKQEKKKKGKRREAGGGEGAGTAGGGGGEGGSKTCEAMNNESGSVHGVSDRGGEAEDEKSVGKKEDTVLMTWRDALAYLSAQGIVPDLEVSKKKKGIWTPYVPLKDRPLGKTYEEAVLGMGTKKRELYEQAQRKRKAAETKGGMEAFFHNMRGTSPGPSLSSSGRKSPHDKNVINDDVSAAKRKPHRTSDSELNRLNHLAASSSHDGANINSQARSENDLLSHKGLGHGGKSAVQHATAWPN 764
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|1210515231|dbj|GAX25943.1| (tRNA pseudouridine38/39 synthase [Fistulifera solaris]) HSP 1 Score: 280.796 bits (717), Expect = 7.238e-82 Identity = 196/564 (34.75%), Postives = 268/564 (47.52%), Query Frame = 0
Query: 115 RHIAIQFSYEGGPYNGLTSN-GPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGELAVRKAALDGWVDAELGMGRFQGSRFQKQEKKKKGKRREAGGGEGAGTAGGGGGEGGSKTCEAMNNESGSVHGVSDRGGEAEDEKSVGKKEDTVLMTWRDALAYLSAQG-IVPDLEVSKKKKGIWTPYVPLKDRPLGKTYEEAV--LGMGTKKRELYE-QAQRKRKAAETKGGMEAFFHNM 673
RHIA+Q Y+G Y GL N G ++SVE L A + LI R+S SRCGRTD+GV+A QVV L+++S +S AS D+ R++ N D E A+D L SA RT E Y +LN +LP DI+VLGW PV D FSARF C RTYRYFF + DL RM A L+GEHDFRNFCKMDV V +F RV+ +A ++ + P PA VC QIQGQAFLWH +RCI ++LF++GRG E ++ +LLDV +YPGKP Y LA E LVLH+C F L+F + + L+ ++ + W + + AR+Q+ + + L VR L + L R Q KK KR A + NE +V S+R +++W+ A+ +L G I+ + E ++P+ DR +G TYEE + L +KR+ YE +KRK +K E F+ M
Sbjct: 89 RHIALQIYYDGSKYTGLAENVGVEHDQSVEKALFRALRQAYLIEGRSSCQYSRCGRTDKGVSAAGQVVALQLKSAISLQ----------------ASWDEAGQRLL---NTD-------------------ELPKNAVDALQLWVPPRKPSAPKQLRTVREYAYDRVLNNLLPSDIQVLGWVPVDDAFSARFSCRDRTYRYFFHSESMDLERMRDAMTLLLGEHDFRNFCKMDVEKVYNFKRVIHQAIIV----------EKEP-------PASGVCYFQIQGQAFLWHQIRCIASILFSIGRGYESPTLISELLDVKKYPGKPAYPLAPERPLVLHNCGFGHLQFGYTVANLWSVYETQKEQWKELILTAARIQNLLETIESLTVRTDDLQAFY---LEKKRVQS--------KKNNKRYFAN----------------------LTNEIAAVP--SER-----------------MISWKQAMEWLQQNGQIMNNTET----------HIPMADRSMGTTYEEKLQALQASDRKRQRYETNVMQKRK---SKQEDEQFYAEM 532
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|1210512859|dbj|GAX28157.1| (tRNA pseudouridine38/39 synthase [Fistulifera solaris]) HSP 1 Score: 273.478 bits (698), Expect = 4.083e-79 Identity = 185/558 (33.15%), Postives = 259/558 (46.42%), Query Frame = 0
Query: 115 RHIAIQFSYEGGPYNGLTSN-GPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGELAVRKAALDGWVDAELGMGRFQGSRFQKQEKKKKGKRREAGGGEGAGTAGGGGGEGGSKTCEAMNNESGSVHGVSDRGGEAEDEKSVGKKEDTVLMTWRDALAYLSAQGIVPDLEVSKKKKGIWTPYVPLKDRPLGKTYEEAV--LGMGTKKRELYE-QAQRKRKAAETKGGMEA 668
RHIA+Q Y+G Y GL N G ++SVE L A + LI DR+S SRCGRTD+GV+A QVV L ++S +S AS D+ R++ N D E A+D L SA RT E Y +LN +LP DI+VLGW PV D FSARF C RTYRYFF + DL RM A L+GEHDFRNFCKMDV V +F RV+ +A ++ P S+ VC QIQGQAFLWH +RCI ++LF++GRG E ++ +LLD+++YPGKP Y LA E LVLH+C F L+F + + ++ ++ + W + AR+Q+ + + L VR L + + +R Q KK KR + NE ++ L++W+ A+ +L G + ++P+ DR +G TYEE + L +KR+ YE + +KRK+ + A
Sbjct: 89 RHIALQIYYDGAKYTGLAENVGVEHDQSVEKALFRALRQAHLIEDRSSCQYSRCGRTDKGVSAAGQVVALELKSAISLQ----------------ASWDEAGQRLL---NTD-------------------ELPKNAVDALQLWVPPRKPSAPKQLRTVREYSYDRVLNNLLPSDIQVLGWVPVDDAFSARFSCRDRTYRYFFHSESLDLERMREAMTLLLGEHDFRNFCKMDVEKVYNFKRVIHQAIIVEK--------------EPRSSG---VCYFQIQGQAFLWHQIRCIASILFSIGRGYESPSLITELLDINKYPGKPAYPLAPERPLVLHNCGFGHLQFGYTVANIWSVYETQKEEWKDLILTAARIQNLLETLESLTVRTDDLQAFY--------LEKTRVQ---SKKNNKRFLVN----------------------LTNEFAALPS-------------------ETLVSWKQAMEWLQQNG---------QAMNNSETHIPMADRSMGTTYEEKLQALQASDRKRQRYETKVVQKRKSKQEDAQFYA 530
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|1183470424|gb|ORY94331.1| (pseudouridine synthase [Lobosporangium transversale]) HSP 1 Score: 267.7 bits (683), Expect = 2.019e-76 Identity = 161/456 (35.31%), Postives = 237/456 (51.97%), Query Frame = 0
Query: 100 KQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVT-TVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQ----------PSALFRLWTELRLAWGQTAVRLARLQDQ--------------MGYVGELAVRKAALDGWV----DAELGMGRFQGSRFQKQE 526
K+K R FDFS++ RH+A + +Y G PY G S G + ++VE++L A + ++I D + SRCGRTDRGV+ L QV+ L VRS L P +SP+ VI + D Y+ AE + G +EE L+ A N + D GEL Y ++NR+LP DIR++ WAPVP+ F+ARF C++R Y+YFF D+ RM AA + +G HDFRNFCK D + T+ ++ R + ++ T E + PM T R L ++G AFLWH VRC+MAVLFAVG+G EE V+D ++D+ + P KP Y +AS+ LV +DCHFE + + +Q P L+R + + ++ +R+ Q M +GE A R AA + + D + MG+ + Q+Q+
Sbjct: 106 KRKDRRPFDFSKYAKRHVAFKIAYFGWPYAGFASQGAVDVKTVESELFNALLAARIIEDPQNCNYSRCGRTDRGVSGLGQVIALTVRSAL--PKSSPY--------------------VI---RSEGDGYDPKAEEEKSEGLTQEE-----LESKAGVYYKNGVKRNKDGSVFGELAYLNIVNRLLPPDIRIVAWAPVPEDFNARFHCAWREYKYFFPKGIIDIDRMRTAATKFLGTHDFRNFCKYDSSKTIVNYDRTIMAISIDTVPEHEF------PM-----TQGREFYQLTLRGSAFLWHQVRCMMAVLFAVGQGLEEPEVIDQMMDIKQCPAKPNYDMASDLPLVFYDCHFENVEWQYQNEVDLVSDITPLRLYRAMEDQWSCYVTKSLMYSRMLQQLDKAMLHNLPERGDMTLLGEYAQRNAAKENNISLGGDLRMFMGKKYATLMQRQK 520
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|1032644033|gb|OAQ25366.1| (tRNA pseudouridine synthase [Mortierella elongata AG-77]) HSP 1 Score: 266.929 bits (681), Expect = 8.229e-76 Identity = 158/413 (38.26%), Postives = 221/413 (53.51%), Query Frame = 0
Query: 87 SLATGSTP---HPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSA----SYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVT-TVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLAR-LQDQ 490
S AT STP K+K R FDFS++ RH+A + +Y G PY G S G NE ++VE++L A + ++I D SRCGRTDRGV+ L QV+ L VRS L P +SP H R + D + + G +EE E A G W + D GEL Y ++NR+LP DIR++ WAPV + F+ARF CS+R Y+YFF D+ +M AA+ + +G HDFRNFCK D + T++++ R + E ++ T E + P S R L ++G AFLWH VRC+M+VL +VG+G EE V+D L+DV + P KP Y +AS+ LVL+DCHFE + + +Q TE+ L T +RL R ++DQ
Sbjct: 97 SEATASTPVYTTIETPKRKDRRPFDFSKYAKRHVAFRVAYFGWPYGGFASQGMNEIKTVESELFNAMLAARIIEDPLQCNYSRCGRTDRGVSGLGQVIALTVRSAL--PKSSP-----------------HVIR------SEGDGFVPETKDLADEGLTQEELE---------AKAGVYWKRGIKRNKDGSVFGELAYLNIINRLLPPDIRIVAWAPVAEDFNARFHCSWRQYKYFFPKGIIDIEKMRAASVKFLGTHDFRNFCKYDASKTIENYDRTIHEISIETVPEHNF--------PAKKS---REFYQLTLKGSAFLWHQVRCMMSVLLSVGQGLEEPEVIDQLMDVQQCPAKPNYDMASDLPLVLYDCHFENIEWQYQ--------TEVDLVNDITPLRLYRAMEDQ 456
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|672820031|gb|KFH64929.1| (hypothetical protein MVEG_09657 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 260.766 bits (665), Expect = 9.553e-74 Identity = 164/446 (36.77%), Postives = 231/446 (51.79%), Query Frame = 0
Query: 51 PLPQDLTRSQLYSMLRHIQEQTDGKALVGHALHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSA----SYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVT-TVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTELRLAWGQTAVRLAR-LQDQ 490
P+P LT S S+ TD G + S + +P P+K K R FDFS++ RH+A + +Y G PY G S G NE ++VE+++ A + ++I D + SRCGRTDRGV+ L QV+ L VRS S P +SP H R + D Y +EE E A G W + D GEL Y ++NR+LP DIR++ WAPV + F+ARF CS+R Y+YFF D+ RM AA + +G HDFRNFCK D + T++++ R + E ++ E +A SRG + L ++G AFLWH VRC+MAVLF VG+G EE ++D ++D+ + P KP Y +AS+ LVL+DCHFE L + +Q TE+ L T +RL R ++DQ
Sbjct: 63 PIPAHLTGSDTSSIPGSPITATDS----GEPISRPESPSNNYSPIETPRK-KDRRPFDFSKYAKRHVAFRVAYFGWPYGGFASQGVNEIKTVESEIFNALMAARIIDDPLTCNYSRCGRTDRGVSGLGQVIALTVRS--SLPKSSP-----------------HVIR------SEGDGYVPETPNPDGPVLTQEEQE---------AKEGVYWKRGIKRNKDGSVFGELAYLNIINRLLPPDIRIVAWAPVSEDFNARFHCSWRQYKYFFPKGIIDIERMRTAAVKFLGTHDFRNFCKYDASKTIENYDRTIHEISIEPVPEHEFA--SRG---------SNEFYQLTLKGSAFLWHQVRCMMAVLFCVGQGLEEPDIIDKMMDLKQCPAKPNYDMASDLPLVLYDCHFENLEWQYQ--------TEVDLVNDITPLRLYRAMEDQ 450
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|530474311|gb|EQB54565.1| (tRNA pseudouridine synthase A [Colletotrichum gloeosporioides Cg-14]) HSP 1 Score: 215.312 bits (547), Expect = 8.598e-58 Identity = 157/424 (37.03%), Postives = 207/424 (48.82%), Query Frame = 0
Query: 58 RSQLYSMLRHIQEQTDG-KALVGHALHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACV-------SRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNE-HAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPD-GFSARFCCSYRTYRYFF-------------DG--DGY-DLGRMSAAAGRLVGEHDFRNFCKMDV-TTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHF 454
+ +L S +RH++ + D KA A+ G+ PP KK+K+ +G D SR+ TR IA++ +Y G Y G ++E +L A K LI A V S+CGRTDRGV+A QV+GLRVRS P P P GDAD+ E AE T E ED P WS E E+DY LNR+LP DIR+L W P P GFSARF C R YRYFF DG +GY D+ M AAA VG+HDFRNFCK+D + +F R + EA V + G AL G + + +V I+G AFLWH +R ++++LF VG+ E+ +V +LLDV + P KP Y LA++ LVL +C F
Sbjct: 13 KERLISRIRHLEHELDKQKAAASKAVD-------GAAAPPPAKKRKTKKGIDPSRYSTRFIALKLAYLGKRYGGFEYADSAALPTIEGELWNALTKACLIFPEDPAVVNFDCCEYSKCGRTDRGVSAFGQVIGLRVRSSKPLPKPEPAP-----------------------TEGDADTPMEGTAEKT-------ETEEDTKKKPEVE------WS------DEKEIDYIKTLNRLLPDDIRILAWCPSPPPGFSARFSCEERQYRYFFTQPAFAPTTGVSADGLKEGYLDIEAMDAAAQLFVGDHDFRNFCKVDGGKQITNFERRMFEAGVEEVKDVGSALPYLG-LSSADGSKLPKVYSFNIRGTAFLWHQIRHMVSILFLVGQRLEKPELVAELLDVEKTPRKPNYDLANDTPLVLWNCVF 386
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|1048066736|ref|XP_017485891.1| (PREDICTED: tRNA pseudouridine(38/39) synthase-like [Rhagoletis zephyria]) HSP 1 Score: 211.846 bits (538), Expect = 1.433e-56 Identity = 146/423 (34.52%), Postives = 198/423 (46.81%), Query Frame = 0
Query: 82 LHHILSLATGSTPHPPPKKQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKLIPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAE-TTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGF-SARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTT-VQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFE-----RLRFHHQPSALFRLWTELRLAWGQTAVRLARLQDQMGYVGE 496
+ + L P+ + R F+FS++ RHI ++F Y GG Y G +VE +L A IKTKLI R +A RCGRTD+GV+A QVV L VRS L P + D DA GD S + V G+ E + A D AGG+ + T ELDY + LN VLP DIRV+ WAP+ SARF C R Y Y+F + RM A L+G HDFRN CKMD+ V +++R V A+V L+ +C QI+ AFLWH +RCIMAVLF +G G+EE ++ LLD+ P +P Y LA + LVL+ ++ R + + L T L W + AV+ A + +G + E
Sbjct: 37 IRQLQGLLNKQAPNGKKTSTRPGRTFEFSQYKQRHIFLRFLYLGGSYEGYVVQEATLN-TVEEKLFEALIKTKLITSRETANYHRCGRTDKGVSAFCQVVSLTVRSRLKQGPGLIVPEGYTGEPVTNDAGDTGT-----DAGGDXRSRLKQGPGLIVPEGYSGEAVTNDAGDTGT-DAGGDQPAVDLST---AELDYISALNGVLPKDIRVIAWAPMASTTTSARFDCRRRLYHYYFPRGQLQIERMHEACQHLIGSHDFRNLCKMDINNGVLTYIRRVFAASVT-------KLEPTSSASADGDDSPYSMCLFQIEASAFLWHQIRCIMAVLFLIGLGREEPSIIARLLDIEAQPARPQYGLAPDLPLVLYAAAYDTETVPRWLYGRNSTVLQTTITSLHEQWTRNAVQAAITRSMIGSLVE 442
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|168049023|ref|XP_001776964.1| (predicted protein [Physcomitrella patens] >gi|162671665|gb|EDQ58213.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 212.616 bits (540), Expect = 1.827e-55 Identity = 136/398 (34.17%), Postives = 198/398 (49.75%), Query Frame = 0
Query: 100 KQKSARGFDFSRFGTRHIAIQFSYEGGPYNGLTSNG--PNEEESV------EAQLLMACIKTKLIPDRAS-ACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASY-DTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDL-------------GRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGE-WGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRFHHQPSALFRLWTEL 473
K+++A S + +RH+A++ Y G Y G S PN E + +L A +T++I A+ A +RCGRTD+GV+A+ QVV L +RS + P + + S + + +P+ G+ S+ ++ +G D + D A+A + T E E DY +LNR LP DIRVLGW PVP GF+ARF C YR Y+YFF DG ++ M A + GEHDF NFCKMD V +++R + ++ + E WG + V + ++G AFLWH VRC+ AVLF VG G E+ +V++LLDV + KP Y +ASE L+L C ++ L F P A+ RL L
Sbjct: 200 KKRNAMEKSMSHYCSRHVALKVMYLGTGYQGFASQAGSPNTVEVQNSLIGGQTELFAALHRTRMITGTAAEAKYTRCGRTDKGVSAVGQVVALYLRSKIQ-PRRQENIVSTGDAEEELNSKSSISAQGVPE--GEDGSFTKN-----SGFVMDLSCIDHSGDRVAMARASRKEEEQFARTAYEDEYDYVGILNRALPEDIRVLGWCPVPPGFNARFSCMYREYKYFFIDDGLNIDVWTLIYAFNRQYNVMKFACKQFEGEHDFTNFCKMDAANVHNYMRTITHFDIIPSNEKWG----------------GKSVWIMNVKGTAFLWHQVRCMAAVLFMVGAGHEKPTIVEELLDVKKIVRKPQYIMASETPLLLFHCGYQGLSFRCHPDAVKRLRLHL 573
BLAST of EWM23621.1 vs. NCBI_GenBank
Match: gi|297739353|emb|CBI29343.3| (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 206.453 bits (524), Expect = 3.701e-55 Identity = 124/352 (35.23%), Postives = 178/352 (50.57%), Query Frame = 0
Query: 109 FSRFGTRHIAIQFSYEGGPYNGLTSNGPNEEESVEAQLLMACIKTKL-IPDRASACVSRCGRTDRGVNALRQVVGLRVRSILSTPSTSPWPPACASSSSPCASPDQHAPRVIPDANGDADSYNEHAETTVTGGFFKEEAEDPALDPAALAAGGNIWSASYDTRTEGELDYTTLLNRVLPLDIRVLGWAPVPDGFSARFCCSYRTYRYFFDGDGYDLGRMSAAAGRLVGEHDFRNFCKMDVTTVQSFVRVVREATVLTAGEWGWALDSRGPMPGPSSTPARRVCCLQIQGQAFLWHMVRCIMAVLFAVGRGQEEVGVVDDLLDVSRYPGKPLYALASEHALVLHDCHFERLRF 459
+ R++A++ Y G + G S + + +VE+++ A KT L + D+ SRCGRTD+GV+++ QV+ L +RS L + ++++ V+P+ + Y E E GG G ++ S EGE+DY +LNRVLP DIRV+GW PVP GF ARF C R Y+YFF ++ M +A + VGEHDFRNFCKMD V ++ R + + P + ++ ++I+G AFLWH VRC++AVLF +G+G E VVD LLD R KP YA+A E LVL C FE L+F
Sbjct: 95 MNHISKRYVALKVMYFGPRFYGFASEA-HMDPTVESEIFKALEKTWLAVGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNL----------------KEIGAREENSKEVVPE-----EQYEERREVKDEGG------------------GDSLAS-------EGEIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKFVGEHDFRNFCKMDAVNVHNYRRHIISFEI---------------APTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKF 384 The following BLAST results are available for this feature:
BLAST of EWM23621.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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