EWM23645.1, cds7028 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|585104797|gb|EWM23645.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRRSPSPLSKGKADKEDS 288 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRRSPSPLSKGKADKEDS Sbjct: 1 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRRSPSPLSKGKADKEDS 288
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|553188673|ref|XP_005854840.1| (short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526] >gi|422294220|gb|EKU21520.1| short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 588.956 bits (1517), Expect = 0.000e+0 Identity = 287/288 (99.65%), Postives = 287/288 (99.65%), Query Frame = 0 Query: 1 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRRSPSPLSKGKADKEDS 288 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR SPSPLSKGKADKEDS Sbjct: 7 MAGKYPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRGSPSPLSKGKADKEDS 294
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|1101995258|ref|WP_071545125.1| (NAD(P)-dependent oxidoreductase [Desulfovibrio dechloracetivorans] >gi|1101479125|gb|OIQ49627.1| NADP-dependent 3-hydroxy acid dehydrogenase YdfG [Desulfovibrio dechloracetivorans]) HSP 1 Score: 319.316 bits (817), Expect = 9.961e-107 Identity = 159/258 (61.63%), Postives = 189/258 (73.26%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 + ITGATAGFGQA A RF A G +V GRR +RLEAL + E E +HT+ DV D + A+ +LP AF ++DVLVNNAG A GL A L+DW AM++TNIKG+ T +LPGMV R GHVV +GSVA YPYPGGNCYGGTKAFV+ F+ NLRADL GT VRVTN+ PGMCETEFS+VRFKGD+A A KVY+G++P+T EDIAE V+WTT LPAHVN+NALE+MPVQQAF+PFAVSR Sbjct: 5 ILITGATAGFGQAMARRFAAEGWNLVITGRRVQRLEAL-----KAELAPAE--------VHTLDFDVRDRAACEQAVKSLPAAFANIDVLVNNAGLALGLEPAQACDLDDWEAMIDTNIKGLTYITRAVLPGMVERNAGHVVNLGSVAGTYPYPGGNCYGGTKAFVNHFSKNLRADLLGTRVRVTNIEPGMCETEFSVVRFKGDKASADKVYEGISPITPEDIAECVFWTTNLPAHVNINALEVMPVQQAFSPFAVSR 249
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|656000632|ref|WP_029042088.1| (NAD(P)-dependent oxidoreductase [Cucumibacter marinus]) HSP 1 Score: 317.775 bits (813), Expect = 5.914e-106 Identity = 156/268 (58.21%), Postives = 190/268 (70.90%), Query Frame = 0 Query: 5 YPHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 Y LDP +L VFITGAT+GFG+ATA RF GA+V+A GRR ERLEAL + E G+ E H + DV D ++A + ALP F V+V+V NAG A GL AHE+ L DW M++TN+ G++ T LLPGM+ R GH+V MGSVAS YPYPGGN Y TKAFV QFA+ LRAD+ G NVRVTN+ PGM ETEFS+VRF+GD+ A KVY+GMTP+TAEDIAE ++W TTLP H NVN L++MPV QAF+PFAV R Sbjct: 2 YQMLDPHELVVFITGATSGFGEATARRFAQAGAKVIATGRRRERLEAL-----QAELGA--------ENCHIAELDVSDNAAIEAVVNALPAGFAHVNVVVANAGLALGLAPAHETDLSDWQTMIDTNVTGLVQTVRALLPGMIERGEGHIVTMGSVASDYPYPGGNVYAATKAFVKQFALALRADINGKNVRVTNIEPGMTETEFSVVRFEGDQQAADKVYEGMTPMTAEDIAESIFWVTTLPRHFNVNRLQMMPVAQAFSPFAVHR 256
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|1055050853|ref|WP_066800733.1| (NAD(P)-dependent oxidoreductase [Desulfovibrio indicus] >gi|998153115|gb|AMK10378.1| NAD(P)-dependent oxidoreductase [Desulfovibrio indicus]) HSP 1 Score: 310.842 bits (795), Expect = 1.918e-103 Identity = 154/258 (59.69%), Postives = 184/258 (71.32%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 + ITGATAGFGQA A RF A G +V GRR ERL QE + P ++HT++ DV D E A+ LP F +DVLVNNAG A GL A SL+DW M++TNIKG+ T +LP MV R GHVV +GSVA YPYPGGNCYGGTKAFV+ F+ NLRADL GT +RVTN+ PG+CETEFS+VRFKGD+A A KVY+G P+TA+DIAE V+WTT LPAHVN+N+LE+MPVQQAFAPFA+SR Sbjct: 5 ILITGATAGFGQAMARRFAAEGWNLVITGRREERL---------QELKAALAP----AKVHTLRFDVRDREQCAQAIKTLPGEFAKIDVLVNNAGLALGLEPAQACSLDDWETMIDTNIKGLTYMTRAVLPSMVERNTGHVVNLGSVAGTYPYPGGNCYGGTKAFVNHFSKNLRADLLGTKIRVTNIEPGLCETEFSVVRFKGDKAAADKVYEGTDPITADDIAECVFWTTNLPAHVNINSLEVMPVQQAFAPFAISR 249
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|504089285|ref|WP_014323279.1| (NAD(P)-dependent oxidoreductase [Desulfovibrio desulfuricans] >gi|323459988|gb|EGB15853.1| short-chain dehydrogenase/reductase SDR [Desulfovibrio desulfuricans ND132]) HSP 1 Score: 309.686 bits (792), Expect = 5.240e-103 Identity = 154/258 (59.69%), Postives = 184/258 (71.32%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 + ITGATAGFGQA A RF A G +V GRRA+RLE L + P ++HT+ DV D E A+ LP F +DVLVNNAG A GL A L+DW M++TNIKG+ T +LPGMV R GHVV +GSVA YPYPGGNCYGGTKAFV+ F+ NLRADL GT VRVTN+ PG+CETEFS+VRFKGD+A A KVY+G P+TA+DIAE V+WTT LPAHVN+N+LE+MPVQQAFAPFA++R Sbjct: 5 ILITGATAGFGQAMARRFAAEGWNLVITGRRAQRLEELK---------AALSP----AKVHTVNFDVRDREACAKAIEDLPAEFAAIDVLVNNAGLALGLEPAQACDLDDWETMIDTNIKGLTFMTRAVLPGMVERNAGHVVNLGSVAGNYPYPGGNCYGGTKAFVNHFSKNLRADLLGTGVRVTNIEPGLCETEFSVVRFKGDKAAADKVYEGTRPITADDIAECVFWTTNLPAHVNINSLEVMPVQQAFAPFAIAR 249
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|505227980|ref|WP_015415082.1| (NAD(P)-dependent oxidoreductase [Desulfovibrio piezophilus] >gi|451896159|emb|CCH49038.1| NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG [Desulfovibrio piezophilus C1TLV30]) HSP 1 Score: 303.523 bits (776), Expect = 1.552e-100 Identity = 144/258 (55.81%), Postives = 187/258 (72.48%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 VFITGATAGFG+A A R+ A G +++ GRR +RLE L + P +HT+ DV D E +AA+ A+PP F D+DVLVNNAG A G+ H+ L++W M++TNIKG+L T ++ GMV R RGH+V +GSVA YPYPGGN YG TKAFV QF++N+RADL GT VRVTN+ PG+CE+EFS+VRF+GD + A++VY GM P+ EDIAE++YW TTLP HVN+NALE+MPV QAF+PFA++R Sbjct: 5 VFITGATAGFGKAMAERYAAEGWQLIVSGRREDRLEELK---------AELAPTA----VHTVCFDVRDREATQAAIAAIPPQFADIDVLVNNAGLALGMEPVHKCDLDEWDCMIDTNIKGLLYVTRTVVEGMVERGRGHIVNLGSVAGTYPYPGGNTYGATKAFVKQFSLNMRADLLGTPVRVTNIEPGLCESEFSVVRFRGDASMAEQVYKGMQPIVPEDIAEIIYWVTTLPPHVNINALEVMPVDQAFSPFAINR 249
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|655590992|ref|WP_028938129.1| (NAD(P)-dependent oxidoreductase [Pseudonocardia spinosispora]) HSP 1 Score: 303.138 bits (775), Expect = 2.679e-100 Identity = 154/261 (59.00%), Postives = 185/261 (70.88%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMC-ETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSRRS 274 VF+TGA++GFG A A RF+A GARVVA RR E L AL EQ +H ++ DV D G++ A+ LP AF ++D+LVNNAG A GL A + +EDW MV+TN KG++ T LLPGMV+R RGHVV MGS AS YPYPGGN YG TKAFVHQF++NLR+DL GT VRV+ + PGMC TEFS VRF GDEA+A VYDGM PLTA DIAE VYWTT LP+H+NVN +E+MPV Q+FAPF VSR + Sbjct: 4 VFVTGASSGFGAAIARRFVAEGARVVAAARRGEALAALVDDLGEQ--------------VHPLELDVRDQAGIERAVAGLPAAFAEIDILVNNAGLAKGLEPAQRALVEDWEQMVDTNCKGLMYCTRALLPGMVSRGRGHVVNMGSTASTYPYPGGNVYGATKAFVHQFSLNLRSDLHGTGVRVSCIEPGMCGGTEFSAVRFGGDEAKAAAVYDGMQPLTATDIAEAVYWTTALPSHMNVNVMELMPVAQSFAPFQVSRST 250
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|506408381|ref|WP_015928100.1| (malonic semialdehyde reductase [Methylobacterium nodulans] >gi|219946012|gb|ACL56404.1| short-chain dehydrogenase/reductase SDR [Methylobacterium nodulans ORS 2060]) HSP 1 Score: 299.671 bits (766), Expect = 6.134e-99 Identity = 148/267 (55.43%), Postives = 185/267 (69.29%), Query Frame = 0 Query: 6 PHLDPRQLCVFITGATAGFGQATALRFLAGGARVVALGRRAERLEALARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCETEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 P LDP L VF+TGATAGFG A RF GARV+ GRR +RL+AL + E G ER H +Q DV D + + AA+ ALP F +V + NAG A GL AHE+ ++DW M+ TN+ G+ T LLPGMVAR GH+V++GSVA YPYPGGN YG TKAFV QFA+NLRADL G NVRVTN+ PGM ETEFSLVRF+GD +A K Y+G+T ++AEDIAE ++W+ LP H+N+N +++MPV QAF+PFAV R Sbjct: 3 PMLDPATLTVFVTGATAGFGAALCRRFAEAGARVIGTGRRPDRLDAL-----KAELG---------ERCHVMQLDVTDRDAVFAAVQALPAGFDAPNVCIANAGLALGLSPAHEAEIDDWDRMIATNVNGLAYTVRALLPGMVARDEGHIVLLGSVAGDYPYPGGNVYGATKAFVKQFALNLRADLLGRNVRVTNIEPGMAETEFSLVRFEGDADQAAKTYEGLTAMSAEDIAETIFWSCILPRHLNINRMQMMPVMQAFSPFAVKR 255
BLAST of EWM23645.1 vs. NCBI_GenBank
Match: gi|1133545647|ref|WP_076023511.1| (NADP-dependent 3-hydroxy acid dehydrogenase [Polynucleobacter sp. MWH-Weng1-1] >gi|1132510482|gb|OLY96330.1| NADP-dependent 3-hydroxy acid dehydrogenase [Polynucleobacter sp. MWH-Weng1-1]) HSP 1 Score: 298.901 bits (764), Expect = 1.194e-98 Identity = 149/260 (57.31%), Postives = 189/260 (72.69%), Query Frame = 0 Query: 15 VFITGATAGFGQATALRFLAGGARVVALGRRAERLEAL-ARLHQEQEHGSGEGPRGESERLHTIQADVGDVEGMKAALGALPPAFRDVDVLVNNAGFAAGLGLAHESSLEDWHAMVETNIKGVLNTTHLLLPGMVARKRGHVVMMGSVASRYPYPGGNCYGGTKAFVHQFAMNLRADLAGTNVRVTNVLPGMCE-TEFSLVRFKGDEARAKKVYDGMTPLTAEDIAEVVYWTTTLPAHVNVNALEIMPVQQAFAPFAVSR 272 V +TGATAGFG+ATA RFLA G +V+ALGRR ERLEAL L EQ++ +L T+ ADV D ++ +LP F + +LVNNAG A GL AH++ L DW M++TNIKG+++ T LPGMV RK GHV+ +GSVA+ YPYPGGN YGGTKAFV QF++NLRADL GT VRVT + PGMC TEFS VRFKGD+A+A+ VY G+ L+A+D+AE ++W+ TLP+H+N+N LE+MPVQQAF PF V R Sbjct: 5 VLVTGATAGFGEATARRFLAHGHKVIALGRRVERLEALKVSLPAEQQN-----------KLLTLAADVCDSTAIEKLAASLPTDFANATILVNNAGLALGLEPAHQAHLSDWDRMIDTNIKGLVHMTRAFLPGMVERKCGHVINLGSVAANYPYPGGNVYGGTKAFVKQFSLNLRADLVGTPVRVTCIEPGMCSGTEFSNVRFKGDDAKAETVYTGVKALSADDVAEAIFWSATLPSHMNINVLEVMPVQQAFNPFNVYR 253 The following BLAST results are available for this feature:
BLAST of EWM23645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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