EWM23658.1, cds7019 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|585104811|gb|EWM23658.1| (transmembrane protein 19 [Nannochloropsis gaditana]) HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query: 1 MRSGVPGPRRRLSYARQTVTAPGFQALRVYVAGKALRNKISDRSDRGASGFEEMLSFDFVEVFAQTAQLFHIHTQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
MRSGVPGPRRRLSYARQTVTAPGFQALRVYVAGKALRNKISDRSDRGASGFEEMLSFDFVEVFAQTAQLFHIHTQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW
Sbjct: 1 MRSGVPGPRRRLSYARQTVTAPGFQALRVYVAGKALRNKISDRSDRGASGFEEMLSFDFVEVFAQTAQLFHIHTQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|553183227|ref|XP_005853861.1| (hypothetical protein NGA_2097620, partial [Nannochloropsis gaditana CCMP526] >gi|553188679|ref|XP_005854842.1| hypothetical protein NGA_2097610, partial [Nannochloropsis gaditana CCMP526] >gi|422294222|gb|EKU21522.1| hypothetical protein NGA_2097610, partial [Nannochloropsis gaditana CCMP526] >gi|422295200|gb|EKU22499.1| hypothetical protein NGA_2097620, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0 Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 0
Query: 74 TQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
TQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGL KHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW
Sbjct: 1 TQRENMSLPDKLPPLPVSEASRPPSKFLINLVMATIFATTLSYRGLRKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 325
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|1173953732|gb|OQS01254.1| (hypothetical protein ACHHYP_01505 [Achlya hypogyna]) HSP 1 Score: 223.402 bits (568), Expect = 5.434e-67 Identity = 131/296 (44.26%), Postives = 181/296 (61.15%), Query Frame = 0
Query: 102 INLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLL 397
I +++ + ++RGL K+SL SGA+AA++VG +SMG RFG L++ FY S S LT ++ KA L+ + K+GGQRSA QVLACSFL ++ V + G D PL+ A P+ + L ++GHYACC DTWASE+G+LSP+ P L+T R VP GTNGG+SL GTLAS AGGA IG + G V +P P W + V G G IGSL DS+LG QATW+ K+++ P A + + R + G DLL+NE VNL+S+A++T ++ L +L
Sbjct: 11 IRILVGIVVGALAAWRGLRKNSLDTSGAIAAFLVGAISMGCGYRFGILLLGFYFSGSKLTTFQEARKATLDANVKEGGQRSARQVLACSFLACIVCVVYAVFFGADA-PLDASAEPVATFLWGCFIGHYACCAADTWASELGVLSPTPPVLITNWCTR-VPPGTNGGISLVGTLASAAGGAFIGLLFYVYG-VCFLP-----VATVPQWPVI-VFGLVAGLIGSLVDSLLGATVQATWFDETTKKIIPVPVAPK-----PFEHRHVCGFDLLTNEQVNLVSVAVTTVISGYLVQLF 292
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|570998702|gb|ETP54848.1| (hypothetical protein F442_00514 [Phytophthora parasitica P10297]) HSP 1 Score: 219.55 bits (558), Expect = 1.732e-65 Identity = 129/298 (43.29%), Postives = 175/298 (58.72%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + +P + + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE VNL+S+ +TA++ V+ L+
Sbjct: 5 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSLPSGTA-------QLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GNVEHVCGIDLLSNEQVNLVSVLATTAISGVVATYLF 282
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|675162391|ref|XP_008890080.1| (hypothetical protein PPTG_00430 [Phytophthora parasitica INRA-310] >gi|566034205|gb|ETI57116.1| hypothetical protein F443_00523 [Phytophthora parasitica P1569] >gi|568000202|gb|ETL50225.1| hypothetical protein L916_00502 [Phytophthora parasitica] >gi|568109355|gb|ETN23962.1| hypothetical protein PPTG_00430 [Phytophthora parasitica INRA-310] >gi|570961903|gb|ETP26882.1| hypothetical protein F441_00521 [Phytophthora parasitica CJ01A1] >gi|970630826|gb|KUF77649.1| Transmembrane protein 19 [Phytophthora nicotianae] >gi|970648572|gb|KUF88077.1| Transmembrane protein 19 [Phytophthora nicotianae]) HSP 1 Score: 218.394 bits (555), Expect = 4.920e-65 Identity = 128/298 (42.95%), Postives = 175/298 (58.72%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + +P + + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE VN++S+ +TA++ V+ L+
Sbjct: 5 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSLPSGTA-------QLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GDVEHVCGIDLLSNEQVNVVSVLATTAISGVVATYLF 282
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|570337904|gb|ETO85852.1| (hypothetical protein F444_00520 [Phytophthora parasitica P1976]) HSP 1 Score: 219.55 bits (558), Expect = 6.394e-65 Identity = 129/298 (43.29%), Postives = 175/298 (58.72%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + +P + + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE VNL+S+ +TA++ V+ L+
Sbjct: 52 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSLPSGTA-------QLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GNVEHVCGIDLLSNEQVNLVSVLATTAISGVVATYLF 329
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|567971879|gb|ETK96877.1| (hypothetical protein L915_00498 [Phytophthora parasitica]) HSP 1 Score: 218.394 bits (555), Expect = 1.492e-64 Identity = 128/298 (42.95%), Postives = 175/298 (58.72%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + +P + + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE VN++S+ +TA++ V+ L+
Sbjct: 52 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSLPSGTA-------QLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GDVEHVCGIDLLSNEQVNVVSVLATTAISGVVATYLF 329
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|568029350|gb|ETM03278.1| (hypothetical protein L917_00473 [Phytophthora parasitica]) HSP 1 Score: 216.853 bits (551), Expect = 1.789e-64 Identity = 128/298 (42.95%), Postives = 174/298 (58.39%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + +P + + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE V L+S+ +TA++ V+ L+
Sbjct: 5 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSLPSGTA-------QLQVVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GNVEHVCGIDLLSNEQVTLVSVLATTAISGVVATYLF 282
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|568059989|gb|ETM56538.1| (hypothetical protein L914_00492 [Phytophthora parasitica]) HSP 1 Score: 215.312 bits (547), Expect = 6.572e-64 Identity = 129/298 (43.29%), Postives = 176/298 (59.06%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVLGRLLW 398
L +++A + A L RGL K SL SGA AA VGF ++ + RFG L++ FY S S LT+ R K L+ ++K GGQRSA QVLACS L T IAV V G DD+ L+F+ +P RS LL +++GHYACC DTWASE+G+LS S PRL+T RR VP GTNGG+S+ G S GGA IG +L + + +SG + +GA G GS+ DSILG QAT++ +++ Q V + G+DLLSNE VN++S+ +TA++ V+ L+
Sbjct: 5 LSRVLVAALLAGGLGRRGLKKQSLDVSGAAAACFVGFFTLASGYRFGLLLLGFYFSGSKLTKVRASVKQQLDANYKPGGQRSARQVLACSLLATFIAVYAVIRFGDDDVALDFKRAPERSYLLASFIGHYACCAADTWASELGVLSKSEPRLITT-LRR-VPPGTNGGVSMLGLAMSALGGAFIG----VLYYAGSL---SSGTAQLQ----VVTLGAVTGLFGSVLDSILGATVQATYFDRSSRKICDENAPQ-------GDVEHVCGIDLLSNEQVNVVSVLATTAISGVVATYLF 282
BLAST of EWM23658.1 vs. NCBI_GenBank
Match: gi|1173957241|gb|OQS03816.1| (hypothetical protein THRCLA_03892 [Thraustotheca clavata]) HSP 1 Score: 214.157 bits (544), Expect = 2.105e-63 Identity = 128/293 (43.69%), Postives = 173/293 (59.04%), Query Frame = 0
Query: 101 LINLVMATIFATTLSYRGLWKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISIALSTALAPVL 393
+I ++ + +YRGL K SL KSGA+AA+VVG SMG RFG L++ FY S S LT ++ KA+++ K+GGQRSA QVLACS L ++ V + ++G DD ++ P + L Y+GHYACC DTWASE+G+LSPS P L+T F VP GTNGG+S GTLAS AGGA IG + G V+ +P + P W +T G G GS DS+LG QATWY K++ P + R + G D+L+NE VNL+S+AL+T ++ L
Sbjct: 4 VIRCIVGLLVGFLAAYRGLRKKSLDKSGAIAAFVVGATSMGCGYRFGILLLGFYFSGSKLTTFQENRKAMMDASVKEGGQRSARQVLACSLLACIVCVIYASVVG-DDAQIDPIKQPTATFLWGCYIGHYACCAADTWASELGVLSPSPPVLITK-FWIKVPTGTNGGISCVGTLASAAGGAFIGLLFYVYG-VIFLPSTS-----VPQWPSIT-FGLVSGLFGSFLDSLLGATIQATWYDDTTKKIAPRPLKTQ-----PFTYRHVCGYDVLTNEQVNLVSVALTTIISGYL 282 The following BLAST results are available for this feature:
BLAST of EWM23658.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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