EWM23650.1, cds7014 (CDS) Nannochloropsis gaditana

Overview
NameEWM23650.1
Unique Namecds7014
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:287729..289141 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23650.1
ProductA1 cistron-splicing factor, AAR2
Orig transcript idgnl|cribi|Naga_100191g15.7760.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:287729..289141 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR007946AAR2
Homology
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|585104803|gb|EWM23650.1| (A1 cistron-splicing factor, AAR2 [Nannochloropsis gaditana])

HSP 1 Score: 947.192 bits (2447), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query:    1 MRLPDRPHQDGGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGKGLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVREAREDGGGDDILRCARTFAAAMEKDFPGLELERQLDVTGGDIGGGLTEGEEEEEGPQVLPWEEYERVMRGPTAEEEECGASGQVDERRLREQERPVGPLETLGEEEAGSGVSGDEAGTGGREGS 470
            MRLPDRPHQDGGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGKGLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVREAREDGGGDDILRCARTFAAAMEKDFPGLELERQLDVTGGDIGGGLTEGEEEEEGPQVLPWEEYERVMRGPTAEEEECGASGQVDERRLREQERPVGPLETLGEEEAGSGVSGDEAGTGGREGS
Sbjct:    1 MRLPDRPHQDGGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGKGLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVREAREDGGGDDILRCARTFAAAMEKDFPGLELERQLDVTGGDIGGGLTEGEEEEEGPQVLPWEEYERVMRGPTAEEEECGASGQVDERRLREQERPVGPLETLGEEEAGSGVSGDEAGTGGREGS 470          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|953501043|emb|CEG37689.1| (mRNA splicing factor [Plasmopara halstedii])

HSP 1 Score: 191.815 bits (486), Expect = 7.404e-51
Identity = 114/340 (33.53%), Postives = 176/340 (51.76%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +PP  EFGID ++ + G  F GV  +P+GIH + F + +   G+RQGFF+NI R  +VIV+ W+   EEL   G+   E ++ +L  A+   +L+  LG YP       W +L+ Y++A VL  CG+     +LPG   E+    R + E    V+   P   R   FT +      R ++D+T  A T Y+ DRSE L++++ + ++                                W  ++GE Q+AFL+FL L S A L  WK+  A++C    AL  ++PL+ AF+KLL  QL+  P DFF  +DE+   +FL P L SL+  + +
Sbjct:  216 GGFLVCLNVPPATEFGIDYEVFRTGSKFLGVKFLPLGIHFVVFRSREQEHGIRQGFFVNIERHSQVIVREWSVEKEEL---GSPQRELNVENLERAVLTFQLDSGLGPYPKQ-HLKTWHRLSNYISASVLQRCGVEFGVILLPGHAVED---VRFSCETQDGVIPYFPDFPRTVRFTPLQ-----RTRQDLTAEARTTYYFDRSERLEELIEEAFN------------------------------GDWKEVIGELQVAFLIFLQLSSFAALEQWKQFIAMMCSCEQALSSYVPLFLAFMKLLMTQLEQIPEDFF--QDELSSKNFLSPCLVSLLELIED 511          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|568026433|gb|ETM00422.1| (hypothetical protein L917_02863 [Phytophthora parasitica] >gi|570334824|gb|ETO82772.1| hypothetical protein F444_03137 [Phytophthora parasitica P1976])

HSP 1 Score: 181.8 bits (460), Expect = 1.159e-48
Identity = 111/340 (32.65%), Postives = 172/340 (50.59%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFFIN+ R  +VIV+ W+   EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL  CG+     +LPGD  E+   S    +    V+   P   R   FT +      + + D+   A T YH DRS+ +++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   33 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSHEQEHGIRQGFFINVERHAQVIVREWSLEKEEL---GPPRPGLNVENLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSNFISASVLQRCGVEFGAILLPGDAVEDAATSSKTQD---GVIPYFPDLPRTVRFTVLQ-----KTRTDLVAQARTAYHFDRSQRVEELIETEFG------------------------------GDWKELIGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVWLFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 328          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|566025685|gb|ETI48596.1| (hypothetical protein F443_07411 [Phytophthora parasitica P1569] >gi|567968810|gb|ETK93928.1| hypothetical protein L915_02961 [Phytophthora parasitica] >gi|567997229|gb|ETL47316.1| hypothetical protein L916_02937 [Phytophthora parasitica] >gi|568056929|gb|ETM53623.1| hypothetical protein L914_02926 [Phytophthora parasitica] >gi|570958897|gb|ETP23876.1| hypothetical protein F441_03069 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 181.8 bits (460), Expect = 1.233e-48
Identity = 111/340 (32.65%), Postives = 172/340 (50.59%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFFIN+ R  +VIV+ W+   EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL  CG+     +LPGD  E+   S    +    V+   P   R   FT +      + + D+   A T YH DRS+ +++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   33 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSHEQEHGIRQGFFINVERHAQVIVREWSLEKEEL---GPPRPGLNVENLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSNFISASVLQRCGVEFGAILLPGDAVEDAATSSKTQD---GVIPYFPDLPRTVRFTVLQ-----KTRTDLVAQARTAYHFDRSQRVEELIETEFG------------------------------GDWKELIGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVWLFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 328          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|675190189|ref|XP_008903979.1| (hypothetical protein PPTG_09945 [Phytophthora parasitica INRA-310] >gi|568096131|gb|ETN10886.1| hypothetical protein PPTG_09945 [Phytophthora parasitica INRA-310])

HSP 1 Score: 181.8 bits (460), Expect = 1.327e-48
Identity = 111/340 (32.65%), Postives = 172/340 (50.59%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFFIN+ R  +VIV+ W+   EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL  CG+     +LPGD  E+   S    +    V+   P   R   FT +      + + D+   A T YH DRS+ +++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   33 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSHEQEHGIRQGFFINVERHAQVIVREWSLEKEEL---GPPRPGLNVENLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSNFISASVLQRCGVEFGAILLPGDAVEDAATSSKTQD---GVIPYFPDLPRTVRFTVLQ-----KTRTDLVAQARTAYHFDRSQRVEELIETEFG------------------------------GDWKELIGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVWLFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 328          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|695459808|ref|XP_009537834.1| (hypothetical protein PHYSODRAFT_530355 [Phytophthora sojae] >gi|348667244|gb|EGZ07070.1| hypothetical protein PHYSODRAFT_530355 [Phytophthora sojae])

HSP 1 Score: 179.104 bits (453), Expect = 4.937e-48
Identity = 113/341 (33.14%), Postives = 170/341 (49.85%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGL-PEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFF+N+ R  +VIV+ W+   EEL     GL PE   R++L      +L+  LG YP       W++L+ +++  VL  CG+     +LPGD  E+   S    E    V+   P   R   FT +      + + D++  A T YH DR   L++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  ALLC    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   42 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSREQEHGIRQGFFVNVERHAQVIVREWSIEKEELGPPRPGLNPENLERAVLSF----QLDSGLGPYP-KQHLKTWQRLSNFISPSVLQRCGVEFGAILLPGDAVEDAATSTKTQE---GVIPYFPDLPRTVRFTTLQ-----KTRTDLSAEARTAYHFDRRWRLEELIETDFG------------------------------GDWKELVGELQLSFLVFLQLSSLAALEQWKQFIALLCSCERALSTHVALFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 337          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|570994845|gb|ETP51876.1| (hypothetical protein F442_03057 [Phytophthora parasitica P10297])

HSP 1 Score: 179.874 bits (455), Expect = 6.314e-48
Identity = 110/340 (32.35%), Postives = 172/340 (50.59%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFFI++ R  +VIV+ W+   EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL  CG+     +LPGD  E+   S    +    V+   P   R   FT +      + + D+   A T YH DRS+ +++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   33 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSHEQEHGIRQGFFIDVERHAQVIVREWSLEKEEL---GPPRPGLNVENLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSNFISASVLQRCGVEFGAILLPGDAVEDAATSSKTQD---GVIPYFPDLPRTVRFTVLQ-----KTRTDLVAQARTAYHFDRSQRVEELIETEFG------------------------------GDWKELIGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVWLFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 328          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|1214700960|gb|OWZ13435.1| (hypothetical protein PHMEG_00013239 [Phytophthora megakarya])

HSP 1 Score: 175.637 bits (444), Expect = 7.393e-47
Identity = 114/348 (32.76%), Postives = 172/348 (49.43%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSM----------CGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNV 345
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFF+N+ R  +VIV+ W+  +EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL            CG+     +LPGD  EE   S    E    VV   P   R   FT +      + + D++  A T YH DRSE L++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL   + L+ AF+KLLR QL+    DFF  +DE    +FL P L SL+  +
Sbjct:   29 GGFLVCLDVPSATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSREQEHGIRQGFFVNVERHAQVIVREWSLENEEL---GPPRPGLNVDNLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSSFISATVLQFGAILLPGDARCGVEFGAILLPGDAVEEAATSTKTQE---GVVPYFPDLPRTVRFTTLQ-----KTRTDLSAEARTAYHFDRSERLEELIETEFG------------------------------GEWKELVGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSQVALFLAFIKLLRTQLEQISEDFF--QDETTSENFLRPCLVSLLELI 332          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|970664389|gb|KUG01304.1| (AAR2 protein [Phytophthora nicotianae])

HSP 1 Score: 175.637 bits (444), Expect = 3.292e-46
Identity = 111/346 (32.08%), Postives = 173/346 (50.00%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTGK---GLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPEGSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSM------CGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDMGVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVRE 347
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + F + +   G+RQGFFIN+ R  +VIV+ W+   EEL   G   P  ++ +L  A+   +L+  LG YP       W++L+ +++A VL +      CG+     +LPGD  E+   S    +    V+   P   R   FT +      + + D+   A T YH DRS+ +++++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+ L+ AF+KL R QL+  P DFF  +DE    +FL P L SL+  + +
Sbjct:   33 GGFLVCLDVPAATEFGVDYEVFRTGPKFQGVKFLPLGIHFVLFRSHEQEHGIRQGFFINVERHAQVIVREWSLEKEEL---GPPRPGLNVENLERAVLSFQLDSGLGPYPKQ-HLKTWQRLSNFISASVLQVRALLMRCGVEFGAILLPGDAVEDAATS---SKTQDGVIPYFPDLPRTVRFTVLQ-----KTRTDLVAQARTAYHFDRSQRVEELIETEFG------------------------------GDWKELIGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVWLFLAFIKLFRTQLEQIPEDFF--QDETTSENFLRPCLLSLLELIED 334          
BLAST of EWM23650.1 vs. NCBI_GenBank
Match: gi|301100540|ref|XP_002899360.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262104277|gb|EEY62329.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 163.31 bits (412), Expect = 3.692e-42
Identity = 123/385 (31.95%), Postives = 183/385 (47.53%), Query Frame = 0
Query:   11 GGIVIILGMPPGFEFGIDMQINQVGPNFRGVAGVPIGIHLLTFGTG---KGLRQGFFINITRPYEVIVKSWNALDEELIEEGTGLPE--GSMRSLLDALKRGELNKHLGAYPDSAQGGLWRQLTKYVTADVLSMCGLALETRILPGDWEEENVRSRGAGEEAGEVVSLCPGGGRAAVFTDM----GVRGRLRDKKDMTPPALTRYHMDRSELLDDMLRDVYSKMPGSSSTAATAAKKPSPSSLPFPPSSSSPSAWMNLLGEHQLAFLLFLNLFSMAGLRHWKESTALLCQVSSALPRHLPLYRAFLKLLRVQLQTAPSDFFVNEDEVGKGSFLGPSLQSLIRNVREAREDGGGDDILRCARTF---AAAMEKD--FPGLELERQL 381
            GG ++ L +P   EFG+D ++ + GP F+GV  +P+GIH + + +     G+RQGFF+N+ R  +VIV+ W+   EEL     GLP    ++ +L  A+   +L+  LG+YP       W +L+ Y++A VL  CG+     +LPGD          A ++A  +       G    F D+    G     R + D+   A T YH DR   L +++   +                                 W  L+GE QL+FL+FL L S+A L  WK+  AL+C    AL  H+PL+ AF+KL R QL+     FF  +DE    +FL P L SL+    E  ED      L  +R      AA+E D   P L LE+++
Sbjct:   37 GGFLVCLDVPAATEFGVDYEVFRTGPEFQGVKFLPLGIHFVLYRSRDQEHGIRQGFFVNVERNAQVIVREWSLEKEEL-----GLPRLGLNVENLERAVLSFQLDSGLGSYPKQ-HLKTWHRLSSYISASVLQRCGVEFGAILLPGD----------AVDDAATLFK--TQDGVTPYFPDLPRTVGFTALQRTRTDLLAEARTGYHFDRRWRLVELIETEFG------------------------------GDWKELMGELQLSFLVFLQLSSLAALEQWKQFIALMCSCERALSSHVPLFMAFIKLFRTQLEQV--HFF--QDETTSENFLRPCLLSLL----ELIEDDDSPPQLLVSRFHWDTNAALEVDEFAPVLVLEKEV 365          
The following BLAST results are available for this feature:
BLAST of EWM23650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104803|gb|EWM23650.1|0.000e+0100.00A1 cistron-splicing factor, AAR2 [Nannochloropsis ... [more]
gi|953501043|emb|CEG37689.1|7.404e-5133.53mRNA splicing factor [Plasmopara halstedii][more]
gi|568026433|gb|ETM00422.1|1.159e-4832.65hypothetical protein L917_02863 [Phytophthora para... [more]
gi|566025685|gb|ETI48596.1|1.233e-4832.65hypothetical protein F443_07411 [Phytophthora para... [more]
gi|675190189|ref|XP_008903979.1|1.327e-4832.65hypothetical protein PPTG_09945 [Phytophthora para... [more]
gi|695459808|ref|XP_009537834.1|4.937e-4833.14hypothetical protein PHYSODRAFT_530355 [Phytophtho... [more]
gi|570994845|gb|ETP51876.1|6.314e-4832.35hypothetical protein F442_03057 [Phytophthora para... [more]
gi|1214700960|gb|OWZ13435.1|7.393e-4732.76hypothetical protein PHMEG_00013239 [Phytophthora ... [more]
gi|970664389|gb|KUG01304.1|3.292e-4632.08AAR2 protein [Phytophthora nicotianae][more]
gi|301100540|ref|XP_002899360.1|3.692e-4231.95conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7031rna7031Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications