EWM23696.1, cds7008 (CDS) Nannochloropsis gaditana

Overview
NameEWM23696.1
Unique Namecds7008
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:275984..277384 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23696.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100030g49.4193.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:275984..277384 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
Homology
[Close]
BLAST of EWM23696.1 vs. NCBI_GenBank
Match: gi|585104850|gb|EWM23696.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 956.822 bits (2472), Expect = 0.000e+0
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0 
Query:    1 MIVIANKTEAQRILSLLEDALNSLNLLAGIPLRLSQDPNLHFSPDVSNILSEQQDMEENVMKSFLMPPFPYSPALPIPESSPLFPPPETELSAYQSQSSNLFPSRCSPHSSGNSSRDTMLKNHLSITRHLVRTMRRFHPKIDACASPTFSLFIGALCDLRNILTQRFSTTLQDDLRRVNTLGKLTDKEKHTFDSLALLQHVSTTKEREQSEEITTLEGLREKLETELAVQEAQSKEERDNIAQELKNSLDLAHTRHAAKITELRKCLEDLVPILAQEAKKYEFTEQLMKEKQTLLEEKLADVMQNYEADVKQKQDDLRWLRATAREEKNELHALREHFAVVERQQAELNNMERERQERALEAEARMRHAVECAIRIQSVFRKHKAVMGYQALKKSGKLAGGDKKAKKKKPGVKAGTKGFVKKANISKAAVSNVSKNESATPVRTLRKAAHGSKKEGAGRKIIKKTK 466
            MIVIANKTEAQRILSLLEDALNSLNLLAGIPLRLSQDPNLHFSPDVSNILSEQQDMEENVMKSFLMPPFPYSPALPIPESSPLFPPPETELSAYQSQSSNLFPSRCSPHSSGNSSRDTMLKNHLSITRHLVRTMRRFHPKIDACASPTFSLFIGALCDLRNILTQRFSTTLQDDLRRVNTLGKLTDKEKHTFDSLALLQHVSTTKEREQSEEITTLEGLREKLETELAVQEAQSKEERDNIAQELKNSLDLAHTRHAAKITELRKCLEDLVPILAQEAKKYEFTEQLMKEKQTLLEEKLADVMQNYEADVKQKQDDLRWLRATAREEKNELHALREHFAVVERQQAELNNMERERQERALEAEARMRHAVECAIRIQSVFRKHKAVMGYQALKKSGKLAGGDKKAKKKKPGVKAGTKGFVKKANISKAAVSNVSKNESATPVRTLRKAAHGSKKEGAGRKIIKKTK
Sbjct:    1 MIVIANKTEAQRILSLLEDALNSLNLLAGIPLRLSQDPNLHFSPDVSNILSEQQDMEENVMKSFLMPPFPYSPALPIPESSPLFPPPETELSAYQSQSSNLFPSRCSPHSSGNSSRDTMLKNHLSITRHLVRTMRRFHPKIDACASPTFSLFIGALCDLRNILTQRFSTTLQDDLRRVNTLGKLTDKEKHTFDSLALLQHVSTTKEREQSEEITTLEGLREKLETELAVQEAQSKEERDNIAQELKNSLDLAHTRHAAKITELRKCLEDLVPILAQEAKKYEFTEQLMKEKQTLLEEKLADVMQNYEADVKQKQDDLRWLRATAREEKNELHALREHFAVVERQQAELNNMERERQERALEAEARMRHAVECAIRIQSVFRKHKAVMGYQALKKSGKLAGGDKKAKKKKPGVKAGTKGFVKKANISKAAVSNVSKNESATPVRTLRKAAHGSKKEGAGRKIIKKTK 466
The following BLAST results are available for this feature:
BLAST of EWM23696.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104850|gb|EWM23696.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7025rna7025Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications