EWM23662.1, cds7007 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|585104816|gb|EWM23662.1| (choline transporter-like protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 1445.64 bits (3741), Expect = 0.000e+0 Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0 Query: 1 MSKHPHAYIASIISAREPRSHSRTHPVPGGMPASAAGVTLTSGGNSVVPRRYILSEQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVCQGSTPFFMPLNIKTMGVCLEECPEIYDPAVVFCIGEVAPTEDNIQKGYCIPQYPTKEIMNRCYITNSTALEAFSMAKSYRDDLDVSVLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVKDKAEEAEIFAKVAC 699 MSKHPHAYIASIISAREPRSHSRTHPVPGGMPASAAGVTLTSGGNSVVPRRYILSEQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVCQGSTPFFMPLNIKTMGVCLEECPEIYDPAVVFCIGEVAPTEDNIQKGYCIPQYPTKEIMNRCYITNSTALEAFSMAKSYRDDLDVSVLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVKDKAEEAEIFAKVAC Sbjct: 1 MSKHPHAYIASIISAREPRSHSRTHPVPGGMPASAAGVTLTSGGNSVVPRRYILSEQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVCQGSTPFFMPLNIKTMGVCLEECPEIYDPAVVFCIGEVAPTEDNIQKGYCIPQYPTKEIMNRCYITNSTALEAFSMAKSYRDDLDVSVLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVKDKAEEAEIFAKVAC 699
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|299471550|emb|CBN80036.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 383.259 bits (983), Expect = 2.754e-120 Identity = 229/649 (35.29%), Postives = 348/649 (53.62%), Query Frame = 0 Query: 43 GGNSVVPRRYILSEQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVC-------QGSTPFFMPLNIKTMGVCLEECPEIY-------------------------DPAVVFCIGEVAPTEDNIQKGY-------CIPQYPTKEIMNRCYITNSTALEAFSMAKSYRDDLDVSVLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENG 652 G NSV P+ E +K A D +G +R CTD F+++L+ AW M+++G + + NG+ ++L NG D++G +C S +++ + GVC+EECP + DP +V PT C+ Q + + + RC + L+ F DV+ L E DV AR +IFG GF + ILGF + +L+ PGL+ + +W V+ L A+G + DW+ D H+D +V ++ G L+LC +VFLRK+I LA G+++E+ RA+ + ++ P LQ A +V FLVPW YSV ASM G + V+ F+Y WY+LFV WT QF++A+GQI +AL V +YFTRD T+ +GT K++ +H GTAAFGSL+IA+++ IR+++ Y+QK L++S +K AQ +LCC C FWCLEK +KF+NKNAYIQ A+ TSFC S K AF+LIARN+ R+GAV++V++FV+ I K+ + + ++ + F++D ++SP+GP ++A++ A F + M +LQ FIADEEMF +RYA L ++D +G Sbjct: 2 GPNSVTPK--------EGEKRGAKLAAPDDIEGGADRR-CTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFD--GTGVCVEECPTVTNFDHLWGCTDEFSGFTVDEGYDCSDDPLECAAKADVDPTGAEDGGFGGGDGAGVCMYQVESVDFVGRCVFSEPEVLDKFVDVGG-----DVAYLQEAASDVYAARGWIFGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGD--GEHTDTQVMGSRVTGYLAYGCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMMFFMPLLQCAAIVAFLVPWVVYSVYTASMADITTEEVAG------------LTVKSFEYSDEVEKRGWYLLFVFFWTTQFVVAMGQIVVALTVVKYYFTRDVETVNNGTFWKSLKEGLRFHTGTAAFGSLIIAIIKTIRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLVIGLGTAGATYVFLQNFMKDDLYSPMGPVFFAGVMAYYVASSFAALLGMTTLTILQCFIADEEMFEGEDRYARNDLKDWLDAHG 620
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|298709154|emb|CBJ31098.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 377.867 bits (969), Expect = 6.662e-119 Identity = 219/574 (38.15%), Postives = 327/574 (56.97%), Query Frame = 0 Query: 90 LLLGAWAVMSWIG--------REAMLNGHVEVLTNGYDWNGTVCQGSTP-------FFMPLNIKTMGVCLEECPEIYDPAVVFCIGEVAPT-------EDNIQK-------GYCIPQYPTKEIMNRCYITN---------STALEAFSMAKSYRD--------DLDVSVLTEF---YGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDW-KNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQ 613 +L AWA M+ +G + + G+ + L NG D+ G +C T +F+P GVC+EECP + C EV P E +IQ+ G C+ T I++ C + + A+EA MA + DVS T F + D++ AR I G G G ++++G + LR PG++++ +W + VWA L G + + W + PR HSD EV AK L MC +W +++ RKRI +A+ + +EA+RAV DM L++L+P +Q+A L++FL+PW + + +AS G ++ TG AG + V++F+Y + A Y LF WT++FI+A+GQI +A+AV++WYF RDK TIGSGT+ +V + YH GTAAFGSL+IA+++ IR+I+AYIQK K + NK+ Q +LCC QC WCLEK +KF+NKNAYIQTA+ G SFCT+ K AFFLIARNIMR+ AV +VSE V+I+GKV + + + + + + D +H + ++LV I+A+F A+MF + Sbjct: 1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLP---SGNGVCVEECPATTNYTQFICYDEVYPEIFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEA-EMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKLLILFPVVQSAALLIFLLPWVTFVLYLASSGEITTEQWE-TG------AGTTITVKQFKYTDNIRYTALYFLFAYFWTSEFIVAMGQIVVAMAVASWYFCRDKSTIGSGTVLSSVKTSLFYHSGTAAFGSLIIAIIKTIRAIVAYIQKKTKDTHNKILQAVLCCVQCCLWCLEKCMKFLNKNAYIQTAIFGYSFCTAAKKAFFLIARNIMRVMAVGVVSEVVLILGKVMIPLVSTVLFYVCAEATISDELHGMVAISVLVFIVAFFVANMFTE 563
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|219118458|ref|XP_002180001.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408258|gb|EEC48192.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 351.288 bits (900), Expect = 4.969e-108 Identity = 220/663 (33.18%), Postives = 353/663 (53.24%), Query Frame = 0 Query: 57 QDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVC-------QGSTPFFMPLNIKTMGVCLEECPEI----------------YD-------------PAVVFCIGEVAPTEDNIQ--KGYCIPQYP----------------------TKEIMNRCYITNSTALEAFSMAKSYRDDLDVS-----VLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFE--PRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENG 652 +DE H K A ADF GP K R CTD L+ L+ W M+ +G A+ NG ++ D++G VC P+ + +N T GVC++ECP++ Y+ P +G+ + + D I C PQ + E++ RCY+T + + S L ++ T+ Y D+ AR ++ G GFG ++++ F++ +L+R P ++ VW+ + A G + +++A+DW ++VP+T S+ + I V+ + + LR +I A+G V++A +AV M +I+L P LQA G + FL+ + +Y N+AS+G GTG E+ +++++ + WY+LF L WT+ FI+AVG + +A++VS WYFT++K TIGS T+ ++ T YH GT A+GSL++AVV+ IR++IA QK K + +K+A +LCCCQC F CLE LKF+NKNAYIQTA+ T+FC S + AF+LI RN RI A+S VS V+I+GK+F+S ++S+Y + +E+ +HS GP +V +++++ +D F +F MA+S +L IADEEMF Y +L ++D++ Sbjct: 3 RDEEH---DKLVAPADFDGPTKDRHCTDILMLLALIAMWVAMTGVGIYAVTNGDYRLVLYPLDYDGNVCGTDFGLDMTEFPYLLYVNSYTGGVCVKECPDLTGKVSDNLTDIGTLVTYNGVFQADNGSLSELPLDYIQVGDYSSSTDAISCTDDTCFPQQSPSLSWVSNGVNQGFGYAYYAADSYELLWRCYLTTEASARIEELVSSQSGGLQIAGDASQFFTKLYADLWVARKYVLGFGFGVSVLVSFVYIFLMRLPLILTAMVWSSIFISIALFFVSGYYAWVFASDWSDEVPQTVSNTTINATTAASIVLYVIGGIMILLACCLRSQIQTAIGCVKQAGKAVNCMIIILLVPVLQAVGFLAFLIVFGYYGANLASLGKISVVEVPLDGTGTQ-------EIAFRKYEFDDFVENCGWYLLFCLFWTSNFIVAVGDMIVAISVSKWYFTKNKVTIGSWTVLTSIWQTLFYHAGTCAYGSLILAVVQMIRAMIARAQKAAKDANSKIAGAILCCCQCFFCCLECCLKFLNKNAYIQTAIFSTAFCKSCRQAFYLIFRNAARIAAISYVSGAVLIVGKLFISAVTTSVSYYFIAEDIENELHSVGGPVAIVFLISYWVSDFFMDVFDMAISTILHCVIADEEMFDGEAGYTEKSLKNWVDKHA 655
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|1210524129|dbj|GAX16858.1| (solute carrier family 44 (choline transporter-like protein), member 2/4/5 [Fistulifera solaris]) HSP 1 Score: 351.288 bits (900), Expect = 1.007e-107 Identity = 238/680 (35.00%), Postives = 353/680 (51.91%), Query Frame = 0 Query: 56 EQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVC-------QGSTPFFMPLNIKTMGVCLEECPEI----------------YD-------------------------PAVVFCIGEV--------APTEDNIQKGYCIPQYP--TKEIMNRCYITNSTA--------LEAFSMAKSYRDDLDVSVLTEFYG-------DVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGH-------FEPRLFQGTGVNPFAEAGPEVIVQR-FQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGS 654 DEA N K A ADF GP R CTD L++L+ AW VM+ +G A+ G ++ D++G +C + P + +N + GVC++ CP++ YD V+ C +P ++ GY Y T ++ RCY+T + E S ++ D + + + + Y D+ AR ++ G GFG +LI+ L+ ++LR P L+ VW L G + + A DW P+T D + G I V+ AL + +RK I +A+ V++A RAV +M LI+ PFLQAA LV F V WS YSV++AS+G +P G + + + + R F + + ++Y+LF L WTA FI+AVG + +A+AV+ W+F R+K T+GS T+ +V T YHLGT A+GSL++A+V+ IR IIA +QK K ++NK+A+Y+LCCCQC FWCLE+ LKF+NKNAYIQTA+ TSFC S + +FFLI RN R+GAV+ VS V+IIGK+F+S ++ +T L D + S GP + ++A++ +D F +F MA+S +L FIADEEMFG YA L Y+D++G Sbjct: 2 SDDEA---NEKLVAPADFDGPTSTRHCTDVFCLLILIAAWVVMTGVGLYAVGEGDYRLVLYPLDYDGNICGTDFKNDMTAYPNLLYVNSFSGGVCVDACPDLTNKTQDGVSDVHTLITYDGVWQPSSGGAQLPLDYVKVADYSNASDVMSCTDATCWDTEAYTSPYSPGVRLGYGYAFYAGTTYGVLGRCYMTTAALDRIEEQLNFEVASATEAASDLMGIGAVEDAYAFWNRVFADLWTARVYVLGFGFGVSLIVSSLYIFMLRLPFLLNTVVWGSIFLTIGMFFFGGYYAWNVATDWDEAEPQTVEDTTITATTGAAIALWVVGALLVVLTCCMRKAIQVALLCVKQAGRAVNNMILILTVPFLQAAALVAFFVVWSIYSVHLASLGEIVTKEVALDPSTLTGQDLPEMDQGLIQPVHYRVFLFDEFVTRCSYYLLFCLFWTANFIVAVGDMIVAVAVAKWFFARNKMTVGSWTVISSVRETVTYHLGTCAYGSLLVAIVQFIRYIIAKLQKKAKETQNKIAEYILCCCQCCFWCLERCLKFINKNAYIQTAIFSTSFCKSCRASFFLIFRNAARVGAVTYVSSAVLIIGKLFISAVTTGFAYIAITERLNDELFSVGGPVTITFLIAYWMSDFFMGVFDMAISTVLHCFIADEEMFGGNGSYADQHLKDYVDKHGAQ 678
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|1210527239|dbj|GAX13874.1| (solute carrier family 44 (choline transporter-like protein), member 2/4/5 [Fistulifera solaris]) HSP 1 Score: 346.28 bits (887), Expect = 7.133e-106 Identity = 241/683 (35.29%), Postives = 357/683 (52.27%), Query Frame = 0 Query: 56 EQDEAHVNNSKFEAAADFQGPVKKRTCTDPCFLILLLGAWAVMSWIGREAMLNGHVEVLTNGYDWNGTVC-------QGSTPFFMPLNIKTMGVCLEECPEI----------------YD-------------------------PAVVFCIGEV--------APTEDNIQKGYCIPQYP--TKEIMNRCYITNST--------ALEAFSMAKSYRDDLDVSVLTEFYG-------DVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAG---PEV---IVQRFQYGASGSD-----FAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGS 654 DEA N K A ADF GP R CTD L++L+ AW VM+ +G A+ G ++ D++G +C + P + +N + GVC++ECP++ YD V+ C +P ++ GY Y T ++ RCY+T + E S ++ D + + + + Y D+ AR ++ G GFG +LI+ L+ ++LR P L+ VW L G + + A DW P+T D + G I V+ L + +RK I +A+ V++A RAV +M LI+ PFLQAA LV F V WS Y+V++AS+G + + ++P A G PE+ ++Q Y D ++Y+LF L WTA FI+AVG + +A+AV+ W+F R+K T+GS T+ +V T YHLGT A+GSL++A+V+ IR IIA +QK K ++NK+A+Y+LCCCQC FWCLE+ LKF+NKNAYIQTA+ TSFC S + +FFLI RN R+GAV+ VS V+IIGK+F+S ++ +T L D + S GP + ++A++ +D F +F MA+S +L FIADEEMFG YA L Y+D++G Sbjct: 2 SDDEA---NEKLVAPADFDGPTSTRHCTDVFCLLILIAAWVVMTGVGLYAVGEGDYRLVLYPLDYDGNICGTDFKNDMTAYPNLLYVNSFSGGVCVDECPDLTNKTQDGVSDVHTLITYDGVWQPSSGGAQLPLDYVKVADYSNASDVMSCTDATCWDTEAYTSPYSPGVRLGYGYAFYAGTTYGVLGRCYMTTAALDRIEEQLNFEIASATEAASDLMGIGAVEDAYAFWNRVFADLWTARAYVLGFGFGVSLIVSSLYIFMLRLPFLLNTVVWGSIFLTIGMFFFGGYYAWNVATDWDEADPQTVEDTTITATTGAAIALWVVGVLLVVLTCCMRKAIQVALLCVKQAGRAVNNMILILTVPFLQAAALVAFFVVWSIYAVHLASLGEIVTKEVE---LDPSALTGEDLPEMDQGLIQPVHYRVFLFDEFITRCSYYLLFCLFWTANFIVAVGDMIVAIAVAKWFFARNKMTVGSWTVISSVRETVTYHLGTCAYGSLLVAIVQFIRYIIAKLQKKAKETQNKIAEYILCCCQCCFWCLERCLKFINKNAYIQTAIFSTSFCKSCRASFFLIFRNAARVGAVTYVSSAVLIIGKLFISAVTTGFAYIAITERLSDELFSVGGPVTITFLIAYWMSDFFMGVFDMAISTVLHCFIADEEMFGGNGSYADQHLKDYVDKHGAQ 678
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|224001702|ref|XP_002290523.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973945|gb|EED92275.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 329.331 bits (843), Expect = 1.566e-100 Identity = 201/596 (33.72%), Postives = 317/596 (53.19%), Query Frame = 0 Query: 78 KKRTCTDPCFLILLLGAWAVMSWIG--------REAMLNGHVEVLTNGYDWNGTVCQGSTPFFMPLNIKTMG------------VCLEECPEIYDPAVVFCIGE---VAPTEDNIQKGY-----CIPQYPTKEIMNRCY-----ITNSTALEAFSMAKSYRDDLDVS--VLTEFYGDVINARTFIFGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSD-----REVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMF 633 +RTCTD FL+LL+ AW M+ +G E + G L NG D++ +C G T + PL + VC+E CP + + C E + T+ ++Q + C+P + ++ C +T S ++ + D ++ + DV N R IF G G A++LG ++ +++ PG + + VWT+ + V A L G + + W + R ++ +V GL + LW+ + ++R+RI LA+ V+E+ARA+ MP++ L+P Q GLV F V W Y +AS G TG + + + Y + A YMLF+ WT+QF++AVGQ+ +A++VS WYF+RD+ IG+ T C+ + + +HLGTAAFGSLVIA+V+ I +I+ Y+QK L +S+ ++A LL WC+EK LKF+NK AY QTA+ SFC + +M FFLI RN +RI AVS+VS V+ I K F++V + +Y + D ++ + PT+L+ ++A+ ++MF ++F M++S LLQ FIADEEMF Sbjct: 3 SRRTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANIC-GVTNYQTPLGADVINLPKAYPLPSGYFVCVERCPSVTNYDEFHCEYETVDITNTKKSLQIAHTSQKQCMPYIKSTSFLSYCIPDIPNVTTSNNETHTEISITMEDQINSQSDFFDKLMTDVYNVRYVIFYFGCGMAMVLGIVFLVVIQLPGFLSLLVWTMIIAVDASLIGAGWYTKETSLKWASSETRGGNEAVALFYASYVLYGLAV-------LWVMIICYIRRRIVLAIYCVKESARAISAMPVMTLFPVAQVLGLVAFTVVWGIYMAFLASSGDV-------TG------SYGCFLYKELTYSTNTKYAALYMLFMWFWTSQFLVAVGQLVVAVSVSLWYFSRDRSQIGNTTFCRVLYLVSFHHLGTAAFGSLVIAIVKTIGTILTYVQKRLSKSQLRLAVLLLKVLHNLMWCIEKCLKFINKQAYCQTAIFSYSFCKAARMGFFLILRNALRISAVSIVSRIVLFINKTFITVASTVAGYYYLEMHFGDELNLLMMPTLLIGLVAYAVSEMFDEVFGMSISTLLQCFIADEEMF 577
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|224003363|ref|XP_002291353.1| (hypothetical protein THAPSDRAFT_262743, partial [Thalassiosira pseudonana CCMP1335] >gi|220973129|gb|EED91460.1| hypothetical protein THAPSDRAFT_262743, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 295.049 bits (754), Expect = 8.300e-91 Identity = 145/319 (45.45%), Postives = 216/319 (67.71%), Query Frame = 0 Query: 315 LVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGP-EVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFV-SVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEE 631 +F+RKRI LA+G V+E ++A+ MP I+++P +Q GL++F++ W Y ++ASMG F + +AGP ++ V+ F++ WY+LF WT+QFI+A+G+I A++VS WYF+RDK IGS T+ ++ + YH GTAAFGSL+IA+++ IRS +AY+Q+ + ++ +A+ +LCC QC FWCLEK ++F+NKNAYIQTA+ G+SFCTS K AFFLI RN RI A++ VS V+ IGKVF+ S+T GA Y M + D ++S IGP + ++WF A MF ++ M ++ +LQ F+ADEE Sbjct: 6 FLFMRKRIQLAMGCVKETSKAITAMPGIIVFPVIQGLGLMVFMIAWCVYVAHLASMGDFSTSQY---------DAGPIKISVRTFEFSNFVKQCGWYLLFCFFWTSQFILAMGEIIFAMSVSKWYFSRDKSNIGSATVWTSIATSMWYHSGTAAFGSLIIAIIKMIRSFLAYLQRKAEEMDSSIAKAVLCCFQCCFWCLEKCMRFLNKNAYIQTAIFGSSFCTSAKEAFFLILRNAARIAAITYVSGGVMFIGKVFITSLTTGAAYVY-MDQEIGDELYSIIGPLFFIAAISWFIAGMFMGVYDMGIATILQCFVADEE 314
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|553184136|ref|XP_005854035.1| (choline transporter-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295024|gb|EKU22323.1| choline transporter-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 267.7 bits (683), Expect = 5.259e-83 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 Query: 557 LVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVK 685 LVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVK Sbjct: 1 LVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENGGSSDGGNRKQNGNAHRTHYDDDDGTTGKIKSVK 129
BLAST of EWM23662.1 vs. NCBI_GenBank
Match: gi|553184139|ref|XP_005854036.1| (choline transporter-like protein 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295025|gb|EKU22324.1| choline transporter-like protein 1-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 251.136 bits (640), Expect = 9.313e-77 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 Query: 244 WLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSV 365 WLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSV Sbjct: 1 WLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSV 122 The following BLAST results are available for this feature:
BLAST of EWM23662.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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