EWM23694.1, cds7001 (CDS) Nannochloropsis gaditana

Overview
NameEWM23694.1
Unique Namecds7001
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:253595..255328 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23694.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100030g41.4191.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:253595..255328 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|585104848|gb|EWM23694.1| (hypothetical protein Naga_100030g41 [Nannochloropsis gaditana])

HSP 1 Score: 1187.94 bits (3072), Expect = 0.000e+0
Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0
Query:    1 MLQTTYSFRLLAWFFGSGAGHSSPLSSALITTSLSNIEASSYAPLSLPKPAQENLPEPFHKQYGWLIAEQDRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDMQESNIQRQKELLAGLQRANEEVRDFTMRIEEEFVKESQRFNLVKQVLGQACIILDVALYGGRLASMAVCVGACWILAPATTEYYASKCSAVAILLTTLVSMVHSVVVAARYILLPSLLSSKVLVILDTLFDGGSGGIRILHSLAVVGVLLSLWRRIRRPSRTMWQIITGRNIEGSKSSKYGDASENTCNDRRLGDTEEMRLRAVLQKVVHGGTGTQVKSGVRRKCEGVEEIGRAISLSAGSYTQPLDAASSSYSGLVTPLHSVCSSEDGKFTPQRRSARLQSRTSFSFDSSGKPCSRLLMNRGILETLSESSE 577
            MLQTTYSFRLLAWFFGSGAGHSSPLSSALITTSLSNIEASSYAPLSLPKPAQENLPEPFHKQYGWLIAEQDRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDMQESNIQRQKELLAGLQRANEEVRDFTMRIEEEFVKESQRFNLVKQVLGQACIILDVALYGGRLASMAVCVGACWILAPATTEYYASKCSAVAILLTTLVSMVHSVVVAARYILLPSLLSSKVLVILDTLFDGGSGGIRILHSLAVVGVLLSLWRRIRRPSRTMWQIITGRNIEGSKSSKYGDASENTCNDRRLGDTEEMRLRAVLQKVVHGGTGTQVKSGVRRKCEGVEEIGRAISLSAGSYTQPLDAASSSYSGLVTPLHSVCSSEDGKFTPQRRSARLQSRTSFSFDSSGKPCSRLLMNRGILETLSESSE
Sbjct:    1 MLQTTYSFRLLAWFFGSGAGHSSPLSSALITTSLSNIEASSYAPLSLPKPAQENLPEPFHKQYGWLIAEQDRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDMQESNIQRQKELLAGLQRANEEVRDFTMRIEEEFVKESQRFNLVKQVLGQACIILDVALYGGRLASMAVCVGACWILAPATTEYYASKCSAVAILLTTLVSMVHSVVVAARYILLPSLLSSKVLVILDTLFDGGSGGIRILHSLAVVGVLLSLWRRIRRPSRTMWQIITGRNIEGSKSSKYGDASENTCNDRRLGDTEEMRLRAVLQKVVHGGTGTQVKSGVRRKCEGVEEIGRAISLSAGSYTQPLDAASSSYSGLVTPLHSVCSSEDGKFTPQRRSARLQSRTSFSFDSSGKPCSRLLMNRGILETLSESSE 577          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|299115527|emb|CBN75731.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 98.2117 bits (243), Expect = 6.760e-18
Identity = 65/215 (30.23%), Postives = 111/215 (51.63%), Query Frame = 0
Query:   90 STCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGD-AAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTD----EVETGFGAIGEQ---YQALLDMQESNIQRQKELLAGLQRANEEVRDFTMRIEEE 296
            S CWRQA   + + C+ M    KQR+A+ L++CHL++ GR+P+ C  R+ D  +C+K++  D AA+ +YT  F   ++ C+ L+   WQ QTE L+  L  SSL       +S   Q+ +LK Q+ ++   + +AD       GL  ++ + + L+D    E+ +    I +Q     +LL  Q+    +   L   L  A  ++  +   IEE+
Sbjct:   94 SACWRQAAVSIDADCETMAHARKQRLAVQLSNCHLQDSGRKPIECTPRDSD-ESCVKKLGDDNAAFQSYTTFFHHVNAICHHLRHTVWQEQTEGLVRGLTASSLATFDRAEQSLEKQEQVLKGQELASAQSQGIAD-------GLSETSTRLAGLSDSLSQELVSAMREIEKQETLLASLLTRQDVAATQASSLSTELNNAKSDLASYMEAIEED 300          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|1133469231|ref|XP_019854752.1| (PREDICTED: uncharacterized protein LOC105313538 [Amphimedon queenslandica])

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-17
Identity = 57/183 (31.15%), Postives = 99/183 (54.10%), Query Frame = 0
Query:   90 STCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLK-RVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDMQESNIQR 271
            STCW++A+  L +SCK++   ++ R+AL  A+CHLE  GR+   C   +  +R+C    V  + A+ TYT+ F  +   C+ LQ+  W+ +TE  IN LG++S + V+ L ES      +   Q  S   Q+D+   + ++ + ++A   +FS   +E+        E+ + LLD   SN+ +
Sbjct:   57 STCWKEALVSLETSCKNLSDTSQSRLALSFANCHLERSGRRTYPCIGGQS-IRDCTSPNVMDNFAFQTYTEFFTHSSHMCFYLQSTLWRERTERTINDLGKTSTEVVSKLEESLEYHKKMETLQSTSLSNQRDILSHEQKIASSIQAGHTRFSNYFEEMIEK----AEKQKLLLDSIFSNLNK 234          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|1022773101|gb|KZS17213.1| (Uncharacterized protein APZ42_016809 [Daphnia magna])

HSP 1 Score: 95.1301 bits (235), Expect = 6.052e-17
Identity = 54/188 (28.72%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   63 YGWLIAEQDRALHEGSQGSGAKPNN----RFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDE 246
            Y +   + D+ L EG         +    R+ +CW+ A++ L   CK +    ++ +AL   +C LE+ G+    C E ++D+  CL ++  +  ++ +T+ F    S CY LQT  WQ +TE  + KL  +S++ V  L ++  +QD +L+ Q++S   Q+ L +S  QL   L+ S      + DE
Sbjct:   37 YKYSALKDDKQLQEGQLNYNLVVRDSQMPRYGSCWKNALKELEHGCKHLTDDLQRFLALKFTNCFLEKVGQTTYPC-ENDEDISVCLSQMNNNG-FTAFTNFFTHTQSMCYFLQTQVWQEETENTVAKLTDNSIKVVKTLEDTNELQDAILEAQRKSLFQQERLLESSSQLGIALDMSKDNVKDMLDE 222          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|779995799|ref|XP_011674497.1| (PREDICTED: uncharacterized protein LOC100889163 [Strongylocentrotus purpuratus])

HSP 1 Score: 94.3597 bits (233), Expect = 1.047e-16
Identity = 48/151 (31.79%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   88 RFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDA-AWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEAST 237
            R+ +CW  A+  +++ CK +    + R+AL LA+CHL + G     C +   D+R+CL  ++GD+ +++ YT+ F      C+ LQ+  W  QTE  + KL QSS      L  +  +Q+ ++K Q ES   Q+++   + +L+  L++ST
Sbjct:   81 RYGSCWINALEAVSTGCKRLTDDEQSRMALTLANCHLAKAGFDTYPC-DDTMDIRDCLNPMKGDSISFNAYTEFFTHTQDICFFLQSQVWHQQTEDTVEKLAQSSEDVAVQLEVTGRLQEDMIKQQNESLKNQQEILAQEAKLNQALKSST 230          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|831787013|ref|XP_012758292.1| (hypothetical protein SAMD00019534_008710 [Acytostelium subglobosum LB1] >gi|735858924|dbj|GAM17696.1| hypothetical protein SAMD00019534_008710 [Acytostelium subglobosum LB1])

HSP 1 Score: 93.2041 bits (230), Expect = 2.106e-16
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 0
Query:   71 DRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQEST-LFQKDLADSQHQLHAGLEASTIQFSRLT 244
            +RAL    +      N++ S CW Q M  L   CK+MD   + R+A+ LASCHLE+ G    +C ++   +  C   +  + A+ TYT+ ++  ++ CY LQ++ +Q QTE  +NKL +S++  +T + +  ++Q  LL    E T L Q+ L +    L   LE S    +R++
Sbjct:   45 ERALKGKDELESLLTNSKKSKCWEQCMESLVHGCKEMDDVQRSRLAVKLASCHLEKSGLTSYQCTDK-MSIPECTSSM-SELAYMTYTNFYISTENICYYLQSELFQQQTEKAVNKLIESTVDTLTSVKQ-IYLQSQLLSESMEQTNLAQQKLVNINSNLKMQLEQSMDFLNRIS 216          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|321479399|gb|EFX90355.1| (hypothetical protein DAPPUDRAFT_33380, partial [Daphnia pulex])

HSP 1 Score: 87.8113 bits (216), Expect = 8.998e-16
Identity = 46/149 (30.87%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   88 RFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEAS 236
            R+ +CW+ A++ L + CK +    ++ +AL   +C LE+ G+    C   + D+  CL ++  +  ++ +T+ F    S CY LQT  WQ +TE  + KL  +S++ V  L ++  +QD +L+ Q++S   Q+ L +S  QL   L+ S
Sbjct:   26 RYGSCWKNALKELETGCKHLTDDLQRWLALQFTNCFLEKAGQTTYPCDNND-DITVCLSQMNNNG-FTAFTNFFTHTQSMCYFLQTQVWQEETENTVAKLTDNSMKVVQTLEDTNELQDAILEAQRKSLSQQERLLESSSQLGIALDMS 172          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|1158841662|ref|XP_020329547.1| (uncharacterized protein LOC109881858 isoform X1 [Oncorhynchus kisutch])

HSP 1 Score: 89.7373 bits (221), Expect = 2.237e-15
Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 0
Query:   67 IAEQDRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQ------QESTLFQ-KDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAI 254
            +A + RA  +  +   A+P  R+  CW  A+  + + C+D  +  + RIALH   CHL + GR    CPE   +V  C  R     A++ YT+ F  A S C  LQ+++WQ Q E  I++L +SS   V  L  +  + ++L++ Q      QE+ L   ++L  + H    G+ A   +    T E +  F  I
Sbjct:   25 VAAEGRAELQRVRNLAAQP--RYGECWSNALENIDARCRDFTVDIQSRIALHFTHCHLRKSGRTFPACPE-GSEVSRC-TRTMDAVAFNAYTEFFTHAHSICRHLQSESWQHQAEDTIHRLTESSAGVVERLSSTQRMAESLVEAQSVALKSQETILRNGEELKHTLHHSTQGIRAVFDEMRLSTQEQQVAFAEI 215          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|1013935614|gb|KYQ89316.1| (hypothetical protein DLAC_09975 [Dictyostelium lacteum])

HSP 1 Score: 88.9669 bits (219), Expect = 4.429e-15
Identity = 56/210 (26.67%), Postives = 110/210 (52.38%), Query Frame = 0
Query:   62 QYGWLIAEQDRALHEGSQGSGAKPNNRFSTCWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPEREKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQA---VTLLGESA-HVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDMQES 267
            Q+   I   +R +         K N+R S CW ++M +L+  CK MD  ++ R+A+ LA+CHL + G     C   +  +  C  ++    +++TYT+ ++  ++ CY LQ++ +Q +TE  IN L QS+ +A   ++LL   A ++ +T+ +  Q+    Q+ L + Q  +   ++ +  +  ++ D  ++ F ++ E  Q   D+ ES
Sbjct:   23 QFEIDIKSNERLIKGRELYDSIKANSRTSRCWEESMDILSGGCKGMDDVSRSRLAVKLANCHLSKSGLPTYTCT-FDMSIPECTSKM-DHLSFTTYTNFYISTENICYYLQSEIFQQKTEDTINHLSQSNFEALSTMSLLNNKAQYISNTIDQTYQD----QQKLVNLQQSMKINMDDAYDKMGKIQDSSQSIFHSMRESNQKQQDIIES 226          
BLAST of EWM23694.1 vs. NCBI_GenBank
Match: gi|645027675|ref|XP_001603391.3| (PREDICTED: uncharacterized protein LOC100119657 [Nasonia vitripennis])

HSP 1 Score: 87.4261 bits (215), Expect = 6.549e-15
Identity = 49/175 (28.00%), Postives = 91/175 (52.00%), Query Frame = 0
Query:   92 CWRQAMRLLASSCKDMDMPTKQRIALHLASCHLEEGGRQPVRCPER--EKDVRNCLKRVQGDAAWSTYTDLFLFADSYCYSLQTDAWQTQTELLINKLGQSSLQAVTLLGESAHVQDTLLKNQQESTLFQKDLADSQHQLHAGLEASTIQFSRLTDEVETGFGAIGEQYQALLDM 264
            CW  A++ + SSC  ++      +AL+LA+C LE+ G     C  R  E+D R C+ ++  D A+  Y + +++A   C+ L  + WQ +T   I  L ++S      L E++HVQ  +L++Q+E    Q  L D   +L   +++S   +  +T+ V +   ++ +Q + L  +
Sbjct:   35 CWHNALKEVKSSCDKLNDNEHSILALYLANCFLEDSGHMTYSCHSRDNERDRRQCINQM-SDRAFGVYNEFYIYASHMCFFLNHEIWQAETHDTIKHLYEASSLMKEQLLEASHVQGAMLESQKEGLKIQNQLLDHGKELENVIQSS---YESVTNMVHSFKESVKDQKELLFQI 205          
The following BLAST results are available for this feature:
BLAST of EWM23694.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104848|gb|EWM23694.1|0.000e+0100.00hypothetical protein Naga_100030g41 [Nannochlorops... [more]
gi|299115527|emb|CBN75731.1|6.760e-1830.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|1133469231|ref|XP_019854752.1|2.585e-1731.15PREDICTED: uncharacterized protein LOC105313538 [A... [more]
gi|1022773101|gb|KZS17213.1|6.052e-1728.72Uncharacterized protein APZ42_016809 [Daphnia magn... [more]
gi|779995799|ref|XP_011674497.1|1.047e-1631.79PREDICTED: uncharacterized protein LOC100889163 [S... [more]
gi|831787013|ref|XP_012758292.1|2.106e-1632.00hypothetical protein SAMD00019534_008710 [Acytoste... [more]
gi|321479399|gb|EFX90355.1|8.998e-1630.87hypothetical protein DAPPUDRAFT_33380, partial [Da... [more]
gi|1158841662|ref|XP_020329547.1|2.237e-1530.26uncharacterized protein LOC109881858 isoform X1 [O... [more]
gi|1013935614|gb|KYQ89316.1|4.429e-1526.67hypothetical protein DLAC_09975 [Dictyostelium lac... [more]
gi|645027675|ref|XP_001603391.3|6.549e-1528.00PREDICTED: uncharacterized protein LOC100119657 [N... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7018rna7018Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications