EWM30664.1, cds7 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|585113360|gb|EWM30664.1| (gcn5-like n-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 729.169 bits (1881), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query: 1 MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356
MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF
Sbjct: 1 MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|224008380|ref|XP_002293149.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971275|gb|EED89610.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 104.76 bits (260), Expect = 1.650e-21 Identity = 106/400 (26.50%), Postives = 170/400 (42.50%), Query Frame = 0
Query: 13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIM---------------EDDAQNEIVGSARLVLRPLSTGGW------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMG-YVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPY----FLAWTR-----NEVLAAPHTD-VWGVRAKSGK--LLAYCSLRRRVDGSMML---VDM-RVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLV--------EKDAMTGLCVE----EGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356
RGL + ++ W TF + F++K P PP +F RHF NDP D + +RV++ E+ EIV S R+ R LS G A G+ EVC +P + +GL++ L+++ L+ S + + S LH SP ++Y+ +G Y V + W + S + Q + + NS +L+ A P ++ A Y F+ TR NE ++A D +W + SG + A+ SLR+R D + VD + S + ++ +N + + D S +EL +P V E+D T ++ + E D GWMY +K S + +E V HL+WP D F
Sbjct: 27 RGLSNTNDIDRWTTFCSSIFSYK-PNPPPPSYFARHFHNDP-KKDASLVRVLVYCPTSTGSGSVDCDEEEKKNGEIVASVRIFRRTLSLGTCGDNCGGDSSVIEAGGIGEVCTSPNHQRRGLSKILLKDALSIMQSTM----TCSFLHASPDFRTVYSKVGCYESVVSHWS---VTSVYLNQLTTIDL--------NSDWILRR-AEFPKDTTQLHALHQKYSEEKFITVTRSEQYWNEYVSAELGDTLWVLTKSSGDRSIAAWLSLRKRGDRYQVCEFGVDREKYSTCSALKLLLGAALNQAGEEIGSDRRDFIS----VELALPTFAVDEIREEAEERDGFTTQFIDLENAQTENDEGWMYVQFDEKEPS------VLEMTKREEKPVHHLIWPTDSF 398
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1072222401|gb|OEU07164.1| (hypothetical protein FRACYDRAFT_251736 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 80.4925 bits (197), Expect = 5.561e-13 Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 0
Query: 13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKA--------------CIRVIMEDDAQNEIVGSARLVLRPLSTGGW------------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYV 148
RGL ++ E+ W F A F++K PP+ ++F RH+ NDP +H + IRV + D +N+IV S R+VLR +STG G+ EVC R +GL+ L++N + +S LH S +Y +GY+
Sbjct: 44 RGLKNDNELHQWTKFCATVFSYKLLNPPSEEYFYRHYVNDPNNHPNSNASKNSGHHGHHHSLIRVAV--DNKNQIVASCRIVLRTISTGRRRHSQEEKDEVFNLNRNLNCGGIGEVCTDISHRRRGLSTVLLKNAIQIMKERTDIH--ISSLHASFQFFPLYKSLGYI 207
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|544210990|ref|XP_005535895.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016207|dbj|BAM79609.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 77.0258 bits (188), Expect = 5.395e-12 Identity = 65/209 (31.10%), Postives = 102/209 (48.80%), Query Frame = 0
Query: 13 RGLVSEEEVQAWATFVAGSFA-FKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGG---WAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCL--DFDASNSAEVLQEMAVLPSAVVEVIARDVP-YFLAWTRNE 214
RGL SEE ++AW FV G F K P R +FLRH NDP + ++ +++ Q++ +GS R+ R + G AAG+ EV VA R +G+A RL++ + + + +LS LH S S S+Y +G++ V ++V V ++ + + L + + +E E A S I RD P Y+ W R E
Sbjct: 66 RGLRSEE-LEAWLEFVYGVFKDAKGTAAPPRSYFLRHVENDPGAVERLSEDILVAVGEQDKFIGSLRIFRRRVYLKGSAVSAAGIGEVSVASAYRRQGIASRLLEE---ASTRMRAAGFALSFLHTSSS-ESLYRSLGWISVPQKFVRV-VREVAHSHRDHIETLALGSEVEIQRCSEAYAEFA---SRFDGCIVRDDPAYWQRWVRAE 265
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1072229849|gb|OEU14583.1| (hypothetical protein FRACYDRAFT_241132 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.0998 bits (183), Expect = 3.937e-11 Identity = 54/203 (26.60%), Postives = 87/203 (42.86%), Query Frame = 0
Query: 13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHF---------------------RNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGW----------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVST----RWVHVWLKSTLMEQAEGVSVQC 174
RGL ++ E+ W F A F++K PP+ ++F RH+ +N + H + +RV D +N+IV S R+VLR +STG G+ EVC R +GL+ L++N L +S LH S +Y +GY+ T RW V + + ++E + +S +C
Sbjct: 46 RGLKNDNELHQWTKFCATVFSYKLLNPPSEEYFYRHYFNDPNNDPNNNSNSTSNANPSKNSGHGH-HSLVRVAF--DNKNQIVASCRIVLRTISTGRRRHSQQEEDKVLNLNLNCGGIGEVCTDITHRRRGLSTILLKNALHIMKE--RKDIHISSLHASFQFFPLYKSLGYISTCTSSGNRWSTVPM-TIMLEASSSLSHRC 242
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|656283275|ref|WP_029228915.1| (GNAT family N-acetyltransferase [Caldicellulosiruptor acetigenus]) HSP 1 Score: 70.0922 bits (170), Expect = 7.156e-10 Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 0
Query: 14 GLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGG---WAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFD----ASNSAEVLQEMAVLPSAVVEV-IARDVPYFLAWTRNE 214
G + E E++ W A F + + D+F RH+ NDP+ D + I V ++D I + RL R + G G+ EV P+ RG GLA L++ + T K S+S+L SL + Y +GY V TR + ++T + E + Q + + N E++ E+ L SA + R+ Y+L+W + E
Sbjct: 4 GTLKEPELEKWFYHCASVFGDNQNLEYWLDYFKRHYFNDPFK-DLSSIFVAVDDSI---IASTVRLFYRRVYFHGKEITVGGIGEVSTKPQYRGMGLASTLLRMAIDTMG---EKKFSISILFA--SLHNFYGKLGY-KVLTREFCLLDRNTFRKYYESKTAQAGEVKEIKLSDNDIEIMDEIYRLYSANFNGPVVRNREYWLSWVKFE 202
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1159268241|ref|WP_079201272.1| (GNAT family N-acetyltransferase [Pseudomonas sp. CC6-YY-74]) HSP 1 Score: 59.6918 bits (143), Expect = 1.998e-7 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0
Query: 33 AFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVST 152
A P+ P D F R R+ P D+ +M+ EIV + L LRPL+ G W +G+ VAP+ RG+GLA++L++ LA ++ +P + L C P L S YA +G++P S+
Sbjct: 8 ALPVPLLPLVDEFYRAHRS-PMRVDRQAQVWVMQ---HTEIVAA--LCLRPLAHGHWLSGLF---VAPKHRGQGLARQLIEQALA-----LTSEP--AWLFCHPELRSFYASLGFLPGSS 111 The following BLAST results are available for this feature:
BLAST of EWM30664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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