EWM30664.1, cds7 (CDS) Nannochloropsis gaditana

Overview
NameEWM30664.1
Unique Namecds7
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:20444..21514 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30664.1
Productgcn5-like n-acetyltransferase
Orig transcript idgnl|cribi|Naga_100091g9.5713.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:20444..21514 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008080N-acetyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR000182GNAT_dom
IPR016181Acyl_CoA_acyltransferase
Homology
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|585113360|gb|EWM30664.1| (gcn5-like n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 729.169 bits (1881), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query:    1 MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356
            MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF
Sbjct:    1 MSAPLSPSLLPPRGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPYFLAWTRNEVLAAPHTDVWGVRAKSGKLLAYCSLRRRVDGSMMLVDMRVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLVEKDAMTGLCVEEGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|224008380|ref|XP_002293149.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971275|gb|EED89610.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 104.76 bits (260), Expect = 1.650e-21
Identity = 106/400 (26.50%), Postives = 170/400 (42.50%), Query Frame = 0
Query:   13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIM---------------EDDAQNEIVGSARLVLRPLSTGGW------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMG-YVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFDASNSAEVLQEMAVLPSAVVEVIARDVPY----FLAWTR-----NEVLAAPHTD-VWGVRAKSGK--LLAYCSLRRRVDGSMML---VDM-RVSVGEGIVAIIRDVINAVAKSSATSTLDGASSTDEIELCIPAVLV--------EKDAMTGLCVE----EGETDPGWMYKPLADKLTSEEWQTFIARYRAQEGANVAHLVWPIDHF 356
            RGL +  ++  W TF +  F++K P PP   +F RHF NDP   D + +RV++               E+    EIV S R+  R LS G              A G+ EVC +P  + +GL++ L+++ L+   S +    + S LH SP   ++Y+ +G Y  V + W    + S  + Q   + +        NS  +L+  A  P    ++ A    Y    F+  TR     NE ++A   D +W +   SG   + A+ SLR+R D   +    VD  + S    +  ++   +N   +   +   D  S    +EL +P   V        E+D  T   ++    + E D GWMY    +K  S      +     +E   V HL+WP D F
Sbjct:   27 RGLSNTNDIDRWTTFCSSIFSYK-PNPPPPSYFARHFHNDP-KKDASLVRVLVYCPTSTGSGSVDCDEEEKKNGEIVASVRIFRRTLSLGTCGDNCGGDSSVIEAGGIGEVCTSPNHQRRGLSKILLKDALSIMQSTM----TCSFLHASPDFRTVYSKVGCYESVVSHWS---VTSVYLNQLTTIDL--------NSDWILRR-AEFPKDTTQLHALHQKYSEEKFITVTRSEQYWNEYVSAELGDTLWVLTKSSGDRSIAAWLSLRKRGDRYQVCEFGVDREKYSTCSALKLLLGAALNQAGEEIGSDRRDFIS----VELALPTFAVDEIREEAEERDGFTTQFIDLENAQTENDEGWMYVQFDEKEPS------VLEMTKREEKPVHHLIWPTDSF 398          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1072222401|gb|OEU07164.1| (hypothetical protein FRACYDRAFT_251736 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 80.4925 bits (197), Expect = 5.561e-13
Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 0
Query:   13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKA--------------CIRVIMEDDAQNEIVGSARLVLRPLSTGGW------------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYV 148
            RGL ++ E+  W  F A  F++K   PP+ ++F RH+ NDP +H  +               IRV +  D +N+IV S R+VLR +STG                      G+ EVC     R +GL+  L++N +            +S LH S     +Y  +GY+
Sbjct:   44 RGLKNDNELHQWTKFCATVFSYKLLNPPSEEYFYRHYVNDPNNHPNSNASKNSGHHGHHHSLIRVAV--DNKNQIVASCRIVLRTISTGRRRHSQEEKDEVFNLNRNLNCGGIGEVCTDISHRRRGLSTVLLKNAIQIMKERTDIH--ISSLHASFQFFPLYKSLGYI 207          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|544210990|ref|XP_005535895.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016207|dbj|BAM79609.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 77.0258 bits (188), Expect = 5.395e-12
Identity = 65/209 (31.10%), Postives = 102/209 (48.80%), Query Frame = 0
Query:   13 RGLVSEEEVQAWATFVAGSFA-FKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGG---WAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCL--DFDASNSAEVLQEMAVLPSAVVEVIARDVP-YFLAWTRNE 214
            RGL SEE ++AW  FV G F   K    P R +FLRH  NDP + ++    +++    Q++ +GS R+  R +   G    AAG+ EV VA   R +G+A RL++     +  + +   +LS LH S S  S+Y  +G++ V  ++V V ++       + +    L  + +    +E   E A   S     I RD P Y+  W R E
Sbjct:   66 RGLRSEE-LEAWLEFVYGVFKDAKGTAAPPRSYFLRHVENDPGAVERLSEDILVAVGEQDKFIGSLRIFRRRVYLKGSAVSAAGIGEVSVASAYRRQGIASRLLEE---ASTRMRAAGFALSFLHTSSS-ESLYRSLGWISVPQKFVRV-VREVAHSHRDHIETLALGSEVEIQRCSEAYAEFA---SRFDGCIVRDDPAYWQRWVRAE 265          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1072229849|gb|OEU14583.1| (hypothetical protein FRACYDRAFT_241132 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 75.0998 bits (183), Expect = 3.937e-11
Identity = 54/203 (26.60%), Postives = 87/203 (42.86%), Query Frame = 0
Query:   13 RGLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHF---------------------RNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGW----------------AAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVST----RWVHVWLKSTLMEQAEGVSVQC 174
            RGL ++ E+  W  F A  F++K   PP+ ++F RH+                     +N  + H  + +RV    D +N+IV S R+VLR +STG                    G+ EVC     R +GL+  L++N L            +S LH S     +Y  +GY+   T    RW  V + + ++E +  +S +C
Sbjct:   46 RGLKNDNELHQWTKFCATVFSYKLLNPPSEEYFYRHYFNDPNNDPNNNSNSTSNANPSKNSGHGH-HSLVRVAF--DNKNQIVASCRIVLRTISTGRRRHSQQEEDKVLNLNLNCGGIGEVCTDITHRRRGLSTILLKNALHIMKE--RKDIHISSLHASFQFFPLYKSLGYISTCTSSGNRWSTVPM-TIMLEASSSLSHRC 242          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|656283275|ref|WP_029228915.1| (GNAT family N-acetyltransferase [Caldicellulosiruptor acetigenus])

HSP 1 Score: 70.0922 bits (170), Expect = 7.156e-10
Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 0
Query:   14 GLVSEEEVQAWATFVAGSFAFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGG---WAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVSTRWVHVWLKSTLMEQAEGVSVQCLDFD----ASNSAEVLQEMAVLPSAVVEV-IARDVPYFLAWTRNE 214
            G + E E++ W    A  F   + +    D+F RH+ NDP+  D + I V ++D     I  + RL  R +   G      G+ EV   P+ RG GLA  L++  + T       K S+S+L    SL + Y  +GY  V TR   +  ++T  +  E  + Q  +      + N  E++ E+  L SA     + R+  Y+L+W + E
Sbjct:    4 GTLKEPELEKWFYHCASVFGDNQNLEYWLDYFKRHYFNDPFK-DLSSIFVAVDDSI---IASTVRLFYRRVYFHGKEITVGGIGEVSTKPQYRGMGLASTLLRMAIDTMG---EKKFSISILFA--SLHNFYGKLGY-KVLTREFCLLDRNTFRKYYESKTAQAGEVKEIKLSDNDIEIMDEIYRLYSANFNGPVVRNREYWLSWVKFE 202          
BLAST of EWM30664.1 vs. NCBI_GenBank
Match: gi|1159268241|ref|WP_079201272.1| (GNAT family N-acetyltransferase [Pseudomonas sp. CC6-YY-74])

HSP 1 Score: 59.6918 bits (143), Expect = 1.998e-7
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   33 AFKKPVPPTRDHFLRHFRNDPYSHDKACIRVIMEDDAQNEIVGSARLVLRPLSTGGWAAGVAEVCVAPRQRGKGLAQRLVQNVLATAASLVSPKPSLSMLHCSPSLVSMYAGMGYVPVST 152
            A   P+ P  D F R  R+ P   D+     +M+     EIV +  L LRPL+ G W +G+    VAP+ RG+GLA++L++  LA     ++ +P  + L C P L S YA +G++P S+
Sbjct:    8 ALPVPLLPLVDEFYRAHRS-PMRVDRQAQVWVMQ---HTEIVAA--LCLRPLAHGHWLSGLF---VAPKHRGQGLARQLIEQALA-----LTSEP--AWLFCHPELRSFYASLGFLPGSS 111          
The following BLAST results are available for this feature:
BLAST of EWM30664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585113360|gb|EWM30664.1|0.000e+0100.00gcn5-like n-acetyltransferase [Nannochloropsis gad... [more]
gi|224008380|ref|XP_002293149.1|1.650e-2126.50predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072222401|gb|OEU07164.1|5.561e-1329.17hypothetical protein FRACYDRAFT_251736 [Fragilario... [more]
gi|544210990|ref|XP_005535895.1|5.395e-1231.10hypothetical protein, conserved [Cyanidioschyzon m... [more]
gi|1072229849|gb|OEU14583.1|3.937e-1126.60hypothetical protein FRACYDRAFT_241132 [Fragilario... [more]
gi|656283275|ref|WP_029228915.1|7.156e-1028.23GNAT family N-acetyltransferase [Caldicellulosirup... [more]
gi|1159268241|ref|WP_079201272.1|1.998e-735.83GNAT family N-acetyltransferase [Pseudomonas sp. C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7rna7Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications