EWM23666.1, cds6992 (CDS) Nannochloropsis gaditana

Overview
NameEWM23666.1
Unique Namecds6992
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:228664..230388 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23666.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100030g30.4163.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:228664..230388 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018253DnaJ_domain_CS
IPR001623DnaJ_domain
Homology
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|585104820|gb|EWM23666.1| (hypothetical protein Naga_100030g30 [Nannochloropsis gaditana])

HSP 1 Score: 1169.84 bits (3025), Expect = 0.000e+0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0
Query:    1 MRAREGRWLERNGSPGHSVLGRLVSLKLACVFLMIHVLIAHLRTAAQTHPEYAHTNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDEKWIFTDPFQLFESFFADTREWGDLRWGWDHEAAGYAGYPSGNVVSDWESDVYEDIEWHSFGGQDFIRIERVYGDGRIEMETKEAPSSSSGRARVDLGGRKKTGEWAHEERGGHKGDSFERFHRPFSSSWGTSTMGVARQALRTGERLKVGDQLLSPEGTHVCFLDHKYEKLVVAENLEDGDILWESNGRGEGWETWEEGDSLKEGARPHSLHESHLSAVVSRQGRVEIWREERVGSIGGRKELVWQSTKDAGGPSVDEDLSSLEYVLTLSDVDGNLALYCVAKEGRALGDEGGDEECVWASRGCPGMGRTARQALEEFGRQVVFPVFRLGVAGLTSLLKQLRAFVRDHGFPNLRRGWMYVYRLTKKAASKLRHAVAERRRVERKKQSQGRGSGSSI 574
            MRAREGRWLERNGSPGHSVLGRLVSLKLACVFLMIHVLIAHLRTAAQTHPEYAHTNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDEKWIFTDPFQLFESFFADTREWGDLRWGWDHEAAGYAGYPSGNVVSDWESDVYEDIEWHSFGGQDFIRIERVYGDGRIEMETKEAPSSSSGRARVDLGGRKKTGEWAHEERGGHKGDSFERFHRPFSSSWGTSTMGVARQALRTGERLKVGDQLLSPEGTHVCFLDHKYEKLVVAENLEDGDILWESNGRGEGWETWEEGDSLKEGARPHSLHESHLSAVVSRQGRVEIWREERVGSIGGRKELVWQSTKDAGGPSVDEDLSSLEYVLTLSDVDGNLALYCVAKEGRALGDEGGDEECVWASRGCPGMGRTARQALEEFGRQVVFPVFRLGVAGLTSLLKQLRAFVRDHGFPNLRRGWMYVYRLTKKAASKLRHAVAERRRVERKKQSQGRGSGSSI
Sbjct:    1 MRAREGRWLERNGSPGHSVLGRLVSLKLACVFLMIHVLIAHLRTAAQTHPEYAHTNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDEKWIFTDPFQLFESFFADTREWGDLRWGWDHEAAGYAGYPSGNVVSDWESDVYEDIEWHSFGGQDFIRIERVYGDGRIEMETKEAPSSSSGRARVDLGGRKKTGEWAHEERGGHKGDSFERFHRPFSSSWGTSTMGVARQALRTGERLKVGDQLLSPEGTHVCFLDHKYEKLVVAENLEDGDILWESNGRGEGWETWEEGDSLKEGARPHSLHESHLSAVVSRQGRVEIWREERVGSIGGRKELVWQSTKDAGGPSVDEDLSSLEYVLTLSDVDGNLALYCVAKEGRALGDEGGDEECVWASRGCPGMGRTARQALEEFGRQVVFPVFRLGVAGLTSLLKQLRAFVRDHGFPNLRRGWMYVYRLTKKAASKLRHAVAERRRVERKKQSQGRGSGSSI 574          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|313238777|emb|CBY13797.1| (unnamed protein product [Oikopleura dioica])

HSP 1 Score: 88.9669 bits (219), Expect = 2.420e-15
Identity = 57/140 (40.71%), Postives = 72/140 (51.43%), Query Frame = 0
Query:   57 LYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDEKWIFTDPFQLFESFFADT 196
            LYE LG++ NA+P ++KKAYR  ALK HPDK  VD+KE A   F EIAEAYEILSDP +RQ YD+                             +  E ++A +   RR +        R E + FTDP +LF  FF  T
Sbjct:    3 LYEILGVSSNASPDEIKKAYRKAALKWHPDK-NVDNKEHAEKKFKEIAEAYEILSDPQKRQVYDV-----------------------------HGMEGLKAGAGGSRRGS--------RHENYHFTDPNELFRQFFGST 104          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|984136495|ref|XP_015360247.1| (PREDICTED: dnaJ homolog subfamily B member 6-like [Marmota marmota marmota])

HSP 1 Score: 81.6481 bits (200), Expect = 4.510e-14
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   55 TNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLAR 123
             N Y  LG+ PNA+ +++KKAY  LAL+ HPDK  + DKEAAA  F E+AEAYE+LSDP +R  YD +R
Sbjct:    2 VNYYRVLGVPPNASSSEIKKAYHQLALRVHPDK-NLKDKEAAAERFKEVAEAYEVLSDPRKRSDYDRSR 69          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|597762126|ref|XP_007245038.1| (PREDICTED: dnaJ homolog subfamily B member 9-like [Astyanax mexicanus])

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-13
Identity = 62/179 (34.64%), Postives = 84/179 (46.93%), Query Frame = 0
Query:   26 LKLACVFLMIHVLIAHLRTAAQTHPEYAHTNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQ-VEEASNLGKQGRDHHHSDRGFGYEDYW-DEDVEAWSAQGRRDAYF-----AHQDHGRDEKWIFTDPF--QLFESFFAD 195
              +A   LMI  LI             A  + YE LG+  +A+   +KKA+  LA+K HPDK +  D EA    F EIAEAYE LSD  RRQ+YD  R     E     + G +H H    F +ED + D DV   SA  +   +F     +H++    +   F   F   +F+  FAD
Sbjct:    8 FTVAVCILMISELIL------------AEEDYYEVLGVTKDASEHQIKKAFHKLAMKYHPDKNKSPDAEAK---FREIAEAYETLSDAKRRQEYDQMRSSPFREQRESTRAGGNHFHQPFSFDFEDIFRDFDVFGQSAHSQHKRHFESHFQSHKEAHTRQNRHFQSSFGGGMFDDMFAD 171          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|551678567|ref|XP_005842036.1| (hypothetical protein GUITHDRAFT_149941 [Guillardia theta CCMP2712] >gi|428186205|gb|EKX55056.1| hypothetical protein GUITHDRAFT_149941 [Guillardia theta CCMP2712])

HSP 1 Score: 81.2629 bits (199), Expect = 1.600e-13
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   56 NLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDR---GFGYEDY 151
            + YE LG+N NA+  ++KKAYR +ALK HPDK   D+++AA + F +++EAYEILSDP +R++YD   +        G +    + S R   G G+++Y
Sbjct:    8 DYYEVLGVNRNASAEEIKKAYRKMALKFHPDK-NPDNRDAAEAKFKKVSEAYEILSDPTKRREYDTYGKAAFNGGGAGPEMNGFYTSSRGGMGHGFQNY 105          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|1063241776|gb|ODQ64608.1| (DnaJ-like protein [Nadsonia fulvescens var. elongata DSM 6958])

HSP 1 Score: 82.4185 bits (202), Expect = 5.106e-13
Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 0
Query:   55 TNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQ----GRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDE 178
            T+LYE LG++ +AT  ++KKAYR LAL  HPDKV  D +E +   F EI++AYEILSD  +RQ YD  R  +E ASN        G D ++ D  FG +D++      ++  G+  ++  +  HG  E
Sbjct:   26 TDLYEVLGVSKSATGVEIKKAYRKLALSYHPDKVSEDKREESEVRFKEISQAYEILSDDEKRQSYD--RYGMEGASNSNYHNAYDGHDEYY-DTSFGPDDFY----SFFNGGGQSHSHSTNGSHGYSE 146          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|667737554|gb|KFA76808.1| (hypothetical protein S40288_03040 [Stachybotrys chartarum IBT 40288])

HSP 1 Score: 80.4925 bits (197), Expect = 5.436e-13
Identity = 51/122 (41.80%), Postives = 64/122 (52.46%), Query Frame = 0
Query:   58 YEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVE-AWSAQGRRDAYFAHQDHGRDE 178
            YE LGL  +A+P  +K AYR  ALKNHPDKV  D KE A   F EIA AY +LSDP RR++YD      E   +             GF + D++ E  E + SA    +  FA +  G DE
Sbjct:   18 YEVLGLERDASPDQIKSAYRKAALKNHPDKVPADKKEEAHQAFQEIAFAYAVLSDPTRRKRYDTTGSTSESVVD-----------SEGFNWSDFYREQFENSVSANAIEE--FAQKYKGSDE 126          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|667524352|gb|KFA53180.1| (hypothetical protein S40293_03176 [Stachybotrys chartarum IBT 40293])

HSP 1 Score: 80.4925 bits (197), Expect = 5.505e-13
Identity = 51/122 (41.80%), Postives = 64/122 (52.46%), Query Frame = 0
Query:   58 YEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVE-AWSAQGRRDAYFAHQDHGRDE 178
            YE LGL  +A+P  +K AYR  ALKNHPDKV  D KE A   F EIA AY +LSDP RR++YD      E   +             GF + D++ E  E + SA    +  FA +  G DE
Sbjct:   18 YEVLGLERDASPDQIKSAYRKAALKNHPDKVPADKKEEAHQAFQEIAFAYAVLSDPTRRKRYDTTGSTSESVVD-----------SEGFNWSDFYREQFENSVSANAIEE--FAQKYKGSDE 126          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|666401071|gb|KEY66839.1| (hypothetical protein S7711_05193 [Stachybotrys chartarum IBT 7711])

HSP 1 Score: 80.4925 bits (197), Expect = 6.444e-13
Identity = 51/122 (41.80%), Postives = 64/122 (52.46%), Query Frame = 0
Query:   58 YEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVE-AWSAQGRRDAYFAHQDHGRDE 178
            YE LGL  +A+P  +K AYR  ALKNHPDKV  D KE A   F EIA AY +LSDP RR++YD      E   +             GF + D++ E  E + SA    +  FA +  G DE
Sbjct:   18 YEVLGLERDASPDQIKSAYRKAALKNHPDKVPADKKEEAHQAFQEIAFAYAVLSDPTRRKRYDTTGSTSESVVD-----------SEGFNWSDFYREQFENSVSANAIEE--FAQKYKGSDE 126          
BLAST of EWM23666.1 vs. NCBI_GenBank
Match: gi|1084228618|gb|OGM18719.1| (hypothetical protein A2686_00350 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_10] >gi|1084391173|gb|OGM60873.1| hypothetical protein A2892_04430 [Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_10b])

HSP 1 Score: 78.5666 bits (192), Expect = 2.318e-12
Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 0
Query:   53 AHTNLYEALGLNPNATPADVKKAYRTLALKNHPDKVQVDDKEAAASVFAEIAEAYEILSDPVRRQQYDLARRQVEEASNLGKQGRDHHHSDRGFGYEDYWDEDVEAWSAQGRRDAYFAHQDHGRDEKWIFTDPFQLFESFFADT 196
            A ++ Y+ LG++ +AT  ++KKAYR  AL+ HPDK   D+KEAA   F EI EAY+ILSD  +R  YD   +    A + G +G         FG    W      ++  G   + F+  D G        DPF +FESFF  T
Sbjct:    3 AKSDYYDILGVSKDATQDEIKKAYRKQALEWHPDK-HKDNKEAAEKRFKEINEAYQILSDKEKRSAYD---QFGHAAFSPGGRGSAGFTGKGPFGQSGRWGPFTYTYTTSGDEGSPFSGFDFG--------DPFDIFESFFGGT 134          
The following BLAST results are available for this feature:
BLAST of EWM23666.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104820|gb|EWM23666.1|0.000e+0100.00hypothetical protein Naga_100030g30 [Nannochlorops... [more]
gi|313238777|emb|CBY13797.1|2.420e-1540.71unnamed protein product [Oikopleura dioica][more]
gi|984136495|ref|XP_015360247.1|4.510e-1456.52PREDICTED: dnaJ homolog subfamily B member 6-like ... [more]
gi|597762126|ref|XP_007245038.1|1.530e-1334.64PREDICTED: dnaJ homolog subfamily B member 9-like ... [more]
gi|551678567|ref|XP_005842036.1|1.600e-1341.41hypothetical protein GUITHDRAFT_149941 [Guillardia... [more]
gi|1063241776|gb|ODQ64608.1|5.106e-1340.63DnaJ-like protein [Nadsonia fulvescens var. elonga... [more]
gi|667737554|gb|KFA76808.1|5.436e-1341.80hypothetical protein S40288_03040 [Stachybotrys ch... [more]
gi|667524352|gb|KFA53180.1|5.505e-1341.80hypothetical protein S40293_03176 [Stachybotrys ch... [more]
gi|666401071|gb|KEY66839.1|6.444e-1341.80hypothetical protein S7711_05193 [Stachybotrys cha... [more]
gi|1084228618|gb|OGM18719.1|2.318e-1237.50hypothetical protein A2686_00350 [Candidatus Woese... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7009rna7009Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications