EWM23685.1, cds6990 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|585104839|gb|EWM23685.1| (hypothetical protein Naga_100030g28 [Nannochloropsis gaditana]) HSP 1 Score: 1286.17 bits (3327), Expect = 0.000e+0 Identity = 634/634 (100.00%), Postives = 634/634 (100.00%), Query Frame = 0
Query: 1 MQISAVVDYDVEAVKAQVDTILASQGVEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFLEALKAKGGPGTDGIETVAQLKAMLGIPEEEEQKHEIKGVDEVSAESGPGDPSSDASSDPVSGSIIRGMEKPASGNNLPDNAVNDAPVFSEPSVLESSPDGKRETLTLGSQMQMVPAQSTAPELVDASAAKIAPAQPAETEPPPLLFSTEALLNMDDAYGAGLEEETLGAVKVLLGDPAVLDVVEGQWLVQAMKQQLASTILAGLEAKHTEARERLALRHAQLQASIPSVSLSSQLEQERQALATACERERAQLRTQLSAEFWQVLEAQQSILGEGAGGAGLPGLEITRDRTAIAKQQKVLRVVTANMQLYHFHRKRQRMTEDLAHQTDLLHELQCAASGVESESGKSTATRAETSKPSSSSAPDAPSPDSLPSGERSNGSSRSKRGTSSGTRWEPVASVEKTVEEGKGGQSEGGRPRKQMRARGDRGHSPHVESANVGRSPPRRSSRRGGHGSAYRDGAESKEKATSAPSADNRAILRRMMEHFK 634
MQISAVVDYDVEAVKAQVDTILASQGVEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFLEALKAKGGPGTDGIETVAQLKAMLGIPEEEEQKHEIKGVDEVSAESGPGDPSSDASSDPVSGSIIRGMEKPASGNNLPDNAVNDAPVFSEPSVLESSPDGKRETLTLGSQMQMVPAQSTAPELVDASAAKIAPAQPAETEPPPLLFSTEALLNMDDAYGAGLEEETLGAVKVLLGDPAVLDVVEGQWLVQAMKQQLASTILAGLEAKHTEARERLALRHAQLQASIPSVSLSSQLEQERQALATACERERAQLRTQLSAEFWQVLEAQQSILGEGAGGAGLPGLEITRDRTAIAKQQKVLRVVTANMQLYHFHRKRQRMTEDLAHQTDLLHELQCAASGVESESGKSTATRAETSKPSSSSAPDAPSPDSLPSGERSNGSSRSKRGTSSGTRWEPVASVEKTVEEGKGGQSEGGRPRKQMRARGDRGHSPHVESANVGRSPPRRSSRRGGHGSAYRDGAESKEKATSAPSADNRAILRRMMEHFK
Sbjct: 1 MQISAVVDYDVEAVKAQVDTILASQGVEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFLEALKAKGGPGTDGIETVAQLKAMLGIPEEEEQKHEIKGVDEVSAESGPGDPSSDASSDPVSGSIIRGMEKPASGNNLPDNAVNDAPVFSEPSVLESSPDGKRETLTLGSQMQMVPAQSTAPELVDASAAKIAPAQPAETEPPPLLFSTEALLNMDDAYGAGLEEETLGAVKVLLGDPAVLDVVEGQWLVQAMKQQLASTILAGLEAKHTEARERLALRHAQLQASIPSVSLSSQLEQERQALATACERERAQLRTQLSAEFWQVLEAQQSILGEGAGGAGLPGLEITRDRTAIAKQQKVLRVVTANMQLYHFHRKRQRMTEDLAHQTDLLHELQCAASGVESESGKSTATRAETSKPSSSSAPDAPSPDSLPSGERSNGSSRSKRGTSSGTRWEPVASVEKTVEEGKGGQSEGGRPRKQMRARGDRGHSPHVESANVGRSPPRRSSRRGGHGSAYRDGAESKEKATSAPSADNRAILRRMMEHFK 634
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|953493025|emb|CEG44971.1| (Tetratricopeptide repeat-containing domain [Plasmopara halstedii]) HSP 1 Score: 102.834 bits (255), Expect = 4.390e-19 Identity = 133/489 (27.20%), Postives = 209/489 (42.74%), Query Frame = 0
Query: 9 YDVEAVKAQVDTILASQG---VEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFLEALKAKGGPGTDGIETVAQLKAMLGIPEEEEQKHEIKGVDEVSAESGPGDPSSDASSDPVSGSIIRGMEKP-----------ASGN---NLPDNAVNDAPVF--------SEPSVLESSPDG--KRETLTLGSQMQMVPAQSTAPELVDASAAKIAPAQPAETEPPPLLFSTEALLNMDDAYGAGLEEETLGAVKVLLGDPAVLDVVEGQWLVQAMKQQLASTI-----LAGLEAKHTEARERLALRHAQLQA----SIPS--VSLSSQLEQERQALATACERERAQLRTQLSAEFWQVLEAQQSILGEGAGGAGLPGLEITRDRTAIAKQQKVLRVVTANMQLY 459
+D V AQ ++ S VEDARK ++TLS W ++ S V + ++V LW YAA E LRQ+KQA KVFE A T + + LW++Y FC ER +F+NA+KV++RA+E L + E IW+ F + DG ++A L+ + +P+ K G A SGP S ++ PV+ S + KP A N + P +AV+ A F S PS L G KR+++ L +S + A + P LLF + A D + E L + +LGD AV + V L + + + L G++ K E E A RH L+ S P ++L +Q ++R+ + C+ + Q + + L+AQQ L +P + +T D AI Q+ ++ ++ +L+
Sbjct: 8 WDASGVVAQAKALILSSNYIKVEDARKEVDDTLSRWVSS----VQAMSDDQGVGQG---KTAVVALWRQYAALEMELRQFKQATKVFERAVTCPVAGSSMALWLQYADFCVERKRFSNARKVFIRALEALPER-EHTAIWARFFGFVCTH----VDGTLSLATLQHQV-MPD----KFPNPGTSIAIAPSGP----SAYTTPPVAVSTLTNPLKPLPNTLQPLPLQAQANASTSQPVSAVDPAVAFIDTTGEVTSSPSPLAVDSVGLSKRKSVDLQIDSDAKRGKSNSASTATAYFVHLPLTLPFIPSCSRLLFDSVA----DGEAQKQIGNELLERLSDVLGDSAVFEGVRD--LRDNQRSRDREMLYRWQELVGMQMK--EGSELFA-RHMALEMQHGFSDPRGLIALKTQHLEQRREFSNRCQMSQQQFVDICALDRADALKAQQISLEN----MKIPEMTVTTDADAITLQRGIVGLILEAEKLW 462
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|570978292|gb|ETP39552.1| (hypothetical protein F442_12984 [Phytophthora parasitica P10297]) HSP 1 Score: 96.6709 bits (239), Expect = 4.616e-17 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|567956094|gb|ETK81719.1| (hypothetical protein L915_12791 [Phytophthora parasitica] >gi|567984765|gb|ETL35122.1| hypothetical protein L916_12705 [Phytophthora parasitica] >gi|568014187|gb|ETL88364.1| hypothetical protein L917_12544 [Phytophthora parasitica] >gi|570946163|gb|ETP11420.1| hypothetical protein F441_13053 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 96.2857 bits (238), Expect = 4.906e-17 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|675170403|ref|XP_008894086.1| (hypothetical protein PPTG_03163 [Phytophthora parasitica INRA-310] >gi|568044398|gb|ETM41612.1| hypothetical protein L914_12622 [Phytophthora parasitica] >gi|568105441|gb|ETN20077.1| hypothetical protein PPTG_03163 [Phytophthora parasitica INRA-310]) HSP 1 Score: 96.2857 bits (238), Expect = 4.949e-17 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|566018777|gb|ETI41688.1| (hypothetical protein F443_13092 [Phytophthora parasitica P1569]) HSP 1 Score: 95.9005 bits (237), Expect = 6.263e-17 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|570322363|gb|ETO70311.1| (hypothetical protein F444_13187 [Phytophthora parasitica P1976]) HSP 1 Score: 95.9005 bits (237), Expect = 6.708e-17 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|970644912|gb|KUF85567.1| (Pre-mRNA-splicing factor clf1 [Phytophthora nicotianae]) HSP 1 Score: 95.1301 bits (235), Expect = 1.017e-16 Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 6 VVDYDVEAVKAQVDTILASQGVE---DARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEFL 149
+ ++ V A+ ++ S E DARK ++TL+ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I ++ LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 5 IATWEASGVVARAKALIHSSNYEKVADARKDVDDTLAKWVAS----IQTQSDPMNVARG---SAAIVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSSTPLWLQYADFCVQRKKFSNARKIFVRALQTLPEQ-EQKAVWARFY 143
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|301104679|ref|XP_002901424.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100899|gb|EEY58951.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 93.5893 bits (231), Expect = 3.345e-16 Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0
Query: 9 YDVEAVKAQVDTILASQGVEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAVEVLDTKAERDMIWSEF 148
+ + KAQ+ L+ V DARK ++T++ W ++ S P++VA ++V LW YAA E LRQ+KQA KVFE A + I + LW++Y FC +R KF+NA+K+++RA++ L + E+ +W+ F
Sbjct: 35 FSIFTHKAQLSD-LSYDKVADARKDVDDTVAKWV----AFVQTQSDPMNVARG---STAVVALWRQYAALEMELRQFKQATKVFERAVSCPIAGSCTALWLQYADFCVQRKKFSNARKIFVRALQTLPER-EQTAVWARF 165
BLAST of EWM23685.1 vs. NCBI_GenBank
Match: gi|1210528132|dbj|GAX13247.1| (hypothetical protein FisN_17Hh184 [Fistulifera solaris]) HSP 1 Score: 91.6633 bits (226), Expect = 9.672e-16 Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 0
Query: 9 YDVEAVKAQVDTILASQGVEDARKHFEETLSSWADEYSRILEEASQPLSVADRQPYEESLVDLWLAYAAFERRLRQWKQAVKVFESATTDVIGEKTSRLWVEYGRFCRERGKFANAQKVYLRAV--------EVLDTKAERDMIWSEFLEALK 153
YD + D L + E + F+ L +W D+ A + ++ D + E++ LWLAYAAF + +Q+K A + +E A I R+W+EY RF ERGK AQ +Y+RA+ ++D + +++++W+EFLE ++
Sbjct: 5 YDPNVIIQAADEKLVNGDFEGGQMMFQSALLTWVDD-------AREGVNQVDPETIREAVASLWLAYAAFLTKAKQFKSATEAYEQAVACQIAGSVGRVWLEYARFAEERGKLKTAQDIYIRALIGEGGKPSSIVDEQ-DQNLLWNEFLEMMR 149 The following BLAST results are available for this feature:
BLAST of EWM23685.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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