EWM23688.1, cds6985 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|585104842|gb|EWM23688.1| (transmembrane bax inhibitor motif-containing protein 4 [Nannochloropsis gaditana]) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query: 1 MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD
Sbjct: 1 MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|1189393935|gb|OSX80822.1| (hypothetical protein BU14_0032s0079 [Porphyra umbilicalis]) HSP 1 Score: 188.734 bits (478), Expect = 2.204e-54 Identity = 113/268 (42.16%), Postives = 156/268 (58.21%), Query Frame = 0
Query: 104 NQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGE--------IRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFT-VALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLI-----SWLTGWRSTFWY--SLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
+ G +P + G + YDP ++ + D G +RL LRKVYTILS+QL +TVAV+ +F + + FV+A T V LI + L L +K KHP+NL LL FT +S++VG +C IY QG G+LVL+AF +T+ +FV LT Y S +DFSFLGGF FAGLI +MV + STF + S+ GALLF+ I+YDT ++ + GPDE A++ LYLD+INLF++ILQ+L R D
Sbjct: 5 DMRGGEPASGSSG-KTHYDPVSSSVAAGAATGMDDFDYGTSVGTSDKFVRLQFLRKVYTILSMQLALTVAVAAVFMLSDSVRHFVIAANGPMTIVGLIATLGFLFALMAYKDKHPLNLYLLAGFTAAESYMVGTVCAIYQEQGIGDLVLEAFALTMLVFVSLTIYCFVSKRDFSFLGGFLFAGLI-IMVGASVLNLLLGLGGAQNSTFSFAISVAGALLFTGYILYDTSVIMNQLGPDEWAIAAVNLYLDLINLFMYILQILSRMRED 270
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|545713434|ref|XP_005709020.1| (transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria] >gi|452825504|gb|EME32500.1| transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 187.578 bits (475), Expect = 6.351e-54 Identity = 112/260 (43.08%), Postives = 153/260 (58.85%), Query Frame = 0
Query: 102 MPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRS------TFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
+P+++ K P Y G + Q E G S + + +RL +RKVY ILSLQL TV +S LF N+ IS VL P L + L+ + L L +K +HP N+ LLG+FT +SF+V IC ++ G G +V +AF +T +F LTAY YS KDFSFLGGF +AGL+ L +I+ L GW +F S+ G+LLF I++DT LL R PDE I A+I LYLDVINLF+++LQ+L +RD
Sbjct: 9 VPSENMDKKPNYETGQGI---TDYGQDFEYGTS--VATSMHMVRLGFIRKVYGILSLQLGFTVFLSSLFMLNQSISMVVLRNPWLLWIGLLATMGALFALVFYKNQHPKNMYLLGIFTFGESFMVATICALFRSAGLGVIVFEAFLLTALVFTSLTAYCFYSKKDFSFLGGFLWAGLLCLFGAAMINMLLGWTGNFSPGFSFLISVMGSLLFCGYILFDTSLLINRLSPDEYILAAISLYLDVINLFMYLLQILSYLQRD 263
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|298715791|emb|CBJ28269.1| (Homologue of a Golgi anti-apoptotic protein identified from vaccinia virus. Transmembrane BAX inhi [Ectocarpus siliculosus]) HSP 1 Score: 186.037 bits (471), Expect = 4.034e-53 Identity = 95/216 (43.98%), Postives = 142/216 (65.74%), Query Frame = 0
Query: 139 KTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRR 354
+ + +RL +RKVY ILS+QLL+T AV+ + N + +L V S L+ L C++ K+P+N+ LLG +T +++ VG++C Y QG G +V+QA G+T+A+F+GLT +T + DFSFLGG FA + LM+WG++ + G++ ++ YSLFGA++FS I+YDT LL G DE I ASI LYLD++NLFL+IL+LL + R
Sbjct: 62 EIEKALRLGFIRKVYGILSIQLLLTAAVAAVCVLNDNVRTGILGNLWTVWVGFFFSIGLLLCLMCYRDKYPLNMYLLGAWTFVEAYTVGVVCAAYASQGQGTIVVQAAGLTMAVFLGLTLFTFQTKIDFSFLGGALFASIWVLMLWGVVMSVFGFQQSYLYSLFGAIIFSLYILYDTSLLMNHLGYDEYIVASISLYLDILNLFLYILRLLSRDNR 277
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|922860964|gb|KOO28781.1| (transmembrane bax inhibitor motif-containing protein 4-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 177.948 bits (450), Expect = 1.180e-50 Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 0
Query: 144 IRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWL--TGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLL 349
++ +RKVY+IL+LQLL+T+ S LF F+ VL +P + A +L F L+ LFC+K KHP+N+ LLG FTLC S+ VG++C +YY+ G G +V QA +T A+FV LT YT + +DFSFLG F+ L L++W +++ L G S ++L GALLF I++DT ++ GPD+ I A+I LYLD+INLFL++L+LL
Sbjct: 14 VKAGFIRKVYSILALQLLMTMMGSALFMFHEPTRMLVLTSPNMMMTATLLPFGFLLALFCYKDKHPVNMALLGGFTLCMSYSVGVVCAVYYQTGYGIVVFQALILTSAVFVALTTYTFVTKRDFSFLGAGLFSALFILIIWSILNSLFDFGAGSRMVFALLGALLFCGYILFDTSMILHHCGPDDYIMAAIALYLDLINLFLYMLELL 221
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|551588263|ref|XP_005778836.1| (hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516] >gi|485631273|gb|EOD26407.1| hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 168.703 bits (426), Expect = 4.483e-46 Identity = 105/258 (40.70%), Postives = 152/258 (58.91%), Query Frame = 0
Query: 104 NQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFV--LATPQLFTV--ALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLIS--WLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
++ +PP P +F D Q + P + +D R A LRKVY IL +QLL T A+ G +D + + + +T+ A+I SF L GL C + + P N+++LG FTLC+S+++G IC++YY G G LVL+A +T IF GLT +T+ S DFS +G F L+ L+VWGL + + ++ Y+L G +LFS IVYDT ++ K++ DE I +I LYLD+INLFLFIL+LLG RD
Sbjct: 55 SRRERQPPELPLRAPQFQD-SGEQPFNKTPVADLDMVW---RKAFLRKVYAILGVQLLTTTALVATMMMKGG-ADLITWVQSEGRWTMWTAMIGSFVSLFGLQCVRHRTPHNMLVLGAFTLCESWMIGTICSMYYANGMGILVLEALALTSIIFAGLTVFTMQSKIDFSVMGPALFVSLLALIVWGLFARFFFASVVASQVYALCGVVLFSLFIVYDTHMVLKQYSYDEYIMGAIQLYLDIINLFLFILELLGIKPRD 307
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|224008763|ref|XP_002293340.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970740|gb|EED89076.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 164.081 bits (414), Expect = 1.381e-45 Identity = 93/207 (44.93%), Postives = 132/207 (63.77%), Query Frame = 0
Query: 143 EIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLL 349
E R +RKVY+ILS+QL++T VS A + +VL T++++ S A ++ L C+K KHP N+ LL FT+ ++FLVG T Y G +VL+A +T AIF+GLT +T S DFSFLG GL L++WGL + L G ++ + Y+L G +LFS I++DTWL+ R P E + A+IMLYLD+IN FL++LQLL
Sbjct: 1 ETRRLFIRKVYSILSVQLVLTGVVSTFMAMHVPTQIYVLTHGWPVTLSMVTSIALIVALMCYKDKHPENMYLLATFTIVEAFLVGTTTTAYCAAGYEGVVLEAVFLTGAIFIGLTLFTFQSKIDFSFLGAALSMGLGALILWGLFAMLFGVQTGYAYALIGCILFSGYILFDTWLIMDRLSPSEYVLAAIMLYLDIINFFLYLLQLL 207
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|551664241|ref|XP_005834884.1| (hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712] >gi|428179031|gb|EKX47904.1| hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712]) HSP 1 Score: 162.925 bits (411), Expect = 1.261e-44 Identity = 101/250 (40.40%), Postives = 140/250 (56.00%), Query Frame = 0
Query: 102 MPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGG 351
M SGS+ P+ ++ A +G Q P + + +++ L KVY+IL QLLVT + LF F ++ FVL L + I++ +I L+ K +P N ILLGVFTL F+VG+ C Y G G + A +TL IFV LT + SD DFSFLG F LI L+VW L + + G++ + GALLFS I+YDTW++ + G D+ I ASI LYLDVINLF +L ++GG
Sbjct: 1 MLGSSGSRKVERPQNWKD-----ATNSGWQAPVYESETVRKQVQKDFLIKVYSILCAQLLVTTLICALFVFAEPVTYFVLGNIWLTLLLFIVNLFVIIALWFLKNTYPWNYILLGVFTLSMGFMVGVTCAAYTVNGMGYNIAFAALLTLVIFVSLTVFVSVSDIDFSFLGLFLPVCLIVLLVWSLFAIIFGFQLGMLFGAIGALLFSGFIIYDTWMIMNKMGCDDYIIASIELYLDVINLFSMLLLVMGG 245
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|1211228594|ref|XP_021451064.1| (protein lifeguard 4-like [Oncorhynchus mykiss] >gi|1211274975|ref|XP_021421384.1| protein lifeguard 4-like isoform X1 [Oncorhynchus mykiss] >gi|1211274977|ref|XP_021421385.1| protein lifeguard 4-like isoform X2 [Oncorhynchus mykiss]) HSP 1 Score: 159.073 bits (401), Expect = 2.830e-43 Identity = 102/252 (40.48%), Postives = 141/252 (55.95%), Query Frame = 0
Query: 108 SKPPAYPRGMEE---FYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLIS-WLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
+ P YPR E Y A A Q IR+ LRKVYTILSLQ+++T A S LF + I DFV ++P + V+ I S +I L ++ +HP+NL LL FTL +S V T Y +VLQAF +T A+F+GLTAYT S +DFS LG F+GL L++ G + + ++ GALLF I+YDT LL + P+E + ASI LYLD++NLFL IL++L +++
Sbjct: 2 TTPEKYPRSSIEDDFNYGTNVATASVQ------------IRMDFLRKVYTILSLQIILTTATSALFMYCDTIKDFVHSSPAVVLVSAIGSLVLIIALAFYRHQHPINLYLLAAFTLLESVSVATAVTFY----EYSIVLQAFFLTAAVFLGLTAYTFQSKRDFSKLGAGLFSGLWILIIAGFMKLFFQNDTVELLFAGAGALLFCGFIIYDTHLLMHQLSPEEHVLASINLYLDIVNLFLHILRMLDSMKKN 237
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|357115930|ref|XP_003559738.1| (PREDICTED: BI1-like protein [Brachypodium distachyon] >gi|944077894|gb|KQK13246.1| hypothetical protein BRADI_1g08870 [Brachypodium distachyon]) HSP 1 Score: 159.073 bits (401), Expect = 4.659e-43 Identity = 106/248 (42.74%), Postives = 149/248 (60.08%), Query Frame = 0
Query: 109 KPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQ---LFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDK---DFSFLGGFCFAGLIGLMVWGLISWL--TGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQL 348
+PP P+G E DPEA A P M ++R A +RKVYTILS+Q+L+T+AV+ + F R ++ F ++TP L+ +IL F L L+ + Q+HP+NL+LLG+FT+ SF VGL C GE++L++ +T + V LTAYT ++ + DFSFLG F FA ++ LMV+ LI G S Y AL+F I+YDT L KR+ DE + A++ LYLDVINLFL +L L
Sbjct: 4 RPP--PKGPEWGGDPEAGSAAR--PLYPMMLESPQLRWAFVRKVYTILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFGLYIFLIILPFIVLCPLYYYYQRHPVNLLLLGLFTVAISFAVGLTCAF----TKGEVILESAILTAVVVVSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFALIQIFFPLGRVSLMVYGGLAALVFCGYIIYDTDNLIKRYSYDEYVWAAVALYLDVINLFLSLLTL 243 The following BLAST results are available for this feature:
BLAST of EWM23688.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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