EWM23688.1, cds6985 (CDS) Nannochloropsis gaditana

Overview
NameEWM23688.1
Unique Namecds6985
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:213517..214584 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23688.1
Producttransmembrane bax inhibitor motif-containing protein 4
Orig transcript idgnl|cribi|Naga_100030g23.4185.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:213517..214584 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006214Bax_inhibitor_1-related
Homology
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|585104842|gb|EWM23688.1| (transmembrane bax inhibitor motif-containing protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query:    1 MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
            MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD
Sbjct:    1 MSCSPHTPLCSQLGKGHKESKKVMKTSSCYHDPKRGSADMAGGGDMEPPMASSSPYYYQQQAHTPVMTGQAIPAQAMPAEYYPSYHHHPAPYPHHHSPHQEMPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|1189393935|gb|OSX80822.1| (hypothetical protein BU14_0032s0079 [Porphyra umbilicalis])

HSP 1 Score: 188.734 bits (478), Expect = 2.204e-54
Identity = 113/268 (42.16%), Postives = 156/268 (58.21%), Query Frame = 0
Query:  104 NQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGE--------IRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFT-VALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLI-----SWLTGWRSTFWY--SLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
            +  G +P +   G +  YDP ++       +   D   G         +RL  LRKVYTILS+QL +TVAV+ +F  +  +  FV+A     T V LI +   L  L  +K KHP+NL LL  FT  +S++VG +C IY  QG G+LVL+AF +T+ +FV LT Y   S +DFSFLGGF FAGLI +MV   +            STF +  S+ GALLF+  I+YDT ++  + GPDE   A++ LYLD+INLF++ILQ+L   R D
Sbjct:    5 DMRGGEPASGSSG-KTHYDPVSSSVAAGAATGMDDFDYGTSVGTSDKFVRLQFLRKVYTILSMQLALTVAVAAVFMLSDSVRHFVIAANGPMTIVGLIATLGFLFALMAYKDKHPLNLYLLAGFTAAESYMVGTVCAIYQEQGIGDLVLEAFALTMLVFVSLTIYCFVSKRDFSFLGGFLFAGLI-IMVGASVLNLLLGLGGAQNSTFSFAISVAGALLFTGYILYDTSVIMNQLGPDEWAIAAVNLYLDLINLFMYILQILSRMRED 270          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|545713434|ref|XP_005709020.1| (transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria] >gi|452825504|gb|EME32500.1| transmembrane BAX inhibitor motif containing 4 isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 187.578 bits (475), Expect = 6.351e-54
Identity = 112/260 (43.08%), Postives = 153/260 (58.85%), Query Frame = 0
Query:  102 MPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRS------TFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
            +P+++  K P Y  G       +  Q  E G S  +  +   +RL  +RKVY ILSLQL  TV +S LF  N+ IS  VL  P L  + L+ +   L  L  +K +HP N+ LLG+FT  +SF+V  IC ++   G G +V +AF +T  +F  LTAY  YS KDFSFLGGF +AGL+ L    +I+ L GW        +F  S+ G+LLF   I++DT LL  R  PDE I A+I LYLDVINLF+++LQ+L   +RD
Sbjct:    9 VPSENMDKKPNYETGQGI---TDYGQDFEYGTS--VATSMHMVRLGFIRKVYGILSLQLGFTVFLSSLFMLNQSISMVVLRNPWLLWIGLLATMGALFALVFYKNQHPKNMYLLGIFTFGESFMVATICALFRSAGLGVIVFEAFLLTALVFTSLTAYCFYSKKDFSFLGGFLWAGLLCLFGAAMINMLLGWTGNFSPGFSFLISVMGSLLFCGYILFDTSLLINRLSPDEYILAAISLYLDVINLFMYLLQILSYLQRD 263          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|298715791|emb|CBJ28269.1| (Homologue of a Golgi anti-apoptotic protein identified from vaccinia virus. Transmembrane BAX inhi [Ectocarpus siliculosus])

HSP 1 Score: 186.037 bits (471), Expect = 4.034e-53
Identity = 95/216 (43.98%), Postives = 142/216 (65.74%), Query Frame = 0
Query:  139 KTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRR 354
            + +  +RL  +RKVY ILS+QLL+T AV+ +   N  +   +L       V    S   L+ L C++ K+P+N+ LLG +T  +++ VG++C  Y  QG G +V+QA G+T+A+F+GLT +T  +  DFSFLGG  FA +  LM+WG++  + G++ ++ YSLFGA++FS  I+YDT LL    G DE I ASI LYLD++NLFL+IL+LL  + R
Sbjct:   62 EIEKALRLGFIRKVYGILSIQLLLTAAVAAVCVLNDNVRTGILGNLWTVWVGFFFSIGLLLCLMCYRDKYPLNMYLLGAWTFVEAYTVGVVCAAYASQGQGTIVVQAAGLTMAVFLGLTLFTFQTKIDFSFLGGALFASIWVLMLWGVVMSVFGFQQSYLYSLFGAIIFSLYILYDTSLLMNHLGYDEYIVASISLYLDILNLFLYILRLLSRDNR 277          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|922860964|gb|KOO28781.1| (transmembrane bax inhibitor motif-containing protein 4-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 177.948 bits (450), Expect = 1.180e-50
Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 0
Query:  144 IRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWL--TGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLL 349
            ++   +RKVY+IL+LQLL+T+  S LF F+      VL +P +   A +L F  L+ LFC+K KHP+N+ LLG FTLC S+ VG++C +YY+ G G +V QA  +T A+FV LT YT  + +DFSFLG   F+ L  L++W +++ L   G  S   ++L GALLF   I++DT ++    GPD+ I A+I LYLD+INLFL++L+LL
Sbjct:   14 VKAGFIRKVYSILALQLLMTMMGSALFMFHEPTRMLVLTSPNMMMTATLLPFGFLLALFCYKDKHPVNMALLGGFTLCMSYSVGVVCAVYYQTGYGIVVFQALILTSAVFVALTTYTFVTKRDFSFLGAGLFSALFILIIWSILNSLFDFGAGSRMVFALLGALLFCGYILFDTSMILHHCGPDDYIMAAIALYLDLINLFLYMLELL 221          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|551588263|ref|XP_005778836.1| (hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516] >gi|485631273|gb|EOD26407.1| hypothetical protein EMIHUDRAFT_353880 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 168.703 bits (426), Expect = 4.483e-46
Identity = 105/258 (40.70%), Postives = 152/258 (58.91%), Query Frame = 0
Query:  104 NQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFV--LATPQLFTV--ALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLIS--WLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
            ++   +PP  P    +F D    Q   + P + +D      R A LRKVY IL +QLL T A+        G +D +  + +   +T+  A+I SF  L GL C + + P N+++LG FTLC+S+++G IC++YY  G G LVL+A  +T  IF GLT +T+ S  DFS +G   F  L+ L+VWGL +  +     ++  Y+L G +LFS  IVYDT ++ K++  DE I  +I LYLD+INLFLFIL+LLG   RD
Sbjct:   55 SRRERQPPELPLRAPQFQD-SGEQPFNKTPVADLDMVW---RKAFLRKVYAILGVQLLTTTALVATMMMKGG-ADLITWVQSEGRWTMWTAMIGSFVSLFGLQCVRHRTPHNMLVLGAFTLCESWMIGTICSMYYANGMGILVLEALALTSIIFAGLTVFTMQSKIDFSVMGPALFVSLLALIVWGLFARFFFASVVASQVYALCGVVLFSLFIVYDTHMVLKQYSYDEYIMGAIQLYLDIINLFLFILELLGIKPRD 307          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|224008763|ref|XP_002293340.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220970740|gb|EED89076.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 164.081 bits (414), Expect = 1.381e-45
Identity = 93/207 (44.93%), Postives = 132/207 (63.77%), Query Frame = 0
Query:  143 EIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLL 349
            E R   +RKVY+ILS+QL++T  VS   A +     +VL      T++++ S A ++ L C+K KHP N+ LL  FT+ ++FLVG   T Y   G   +VL+A  +T AIF+GLT +T  S  DFSFLG     GL  L++WGL + L G ++ + Y+L G +LFS  I++DTWL+  R  P E + A+IMLYLD+IN FL++LQLL
Sbjct:    1 ETRRLFIRKVYSILSVQLVLTGVVSTFMAMHVPTQIYVLTHGWPVTLSMVTSIALIVALMCYKDKHPENMYLLATFTIVEAFLVGTTTTAYCAAGYEGVVLEAVFLTGAIFIGLTLFTFQSKIDFSFLGAALSMGLGALILWGLFAMLFGVQTGYAYALIGCILFSGYILFDTWLIMDRLSPSEYVLAAIMLYLDIINFFLYLLQLL 207          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|551664241|ref|XP_005834884.1| (hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712] >gi|428179031|gb|EKX47904.1| hypothetical protein GUITHDRAFT_69344 [Guillardia theta CCMP2712])

HSP 1 Score: 162.925 bits (411), Expect = 1.261e-44
Identity = 101/250 (40.40%), Postives = 140/250 (56.00%), Query Frame = 0
Query:  102 MPNQSGSKPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLISWLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGG 351
            M   SGS+    P+  ++     A  +G Q P    +  + +++   L KVY+IL  QLLVT  +  LF F   ++ FVL    L  +  I++   +I L+  K  +P N ILLGVFTL   F+VG+ C  Y   G G  +  A  +TL IFV LT +   SD DFSFLG F    LI L+VW L + + G++    +   GALLFS  I+YDTW++  + G D+ I ASI LYLDVINLF  +L ++GG
Sbjct:    1 MLGSSGSRKVERPQNWKD-----ATNSGWQAPVYESETVRKQVQKDFLIKVYSILCAQLLVTTLICALFVFAEPVTYFVLGNIWLTLLLFIVNLFVIIALWFLKNTYPWNYILLGVFTLSMGFMVGVTCAAYTVNGMGYNIAFAALLTLVIFVSLTVFVSVSDIDFSFLGLFLPVCLIVLLVWSLFAIIFGFQLGMLFGAIGALLFSGFIIYDTWMIMNKMGCDDYIIASIELYLDVINLFSMLLLVMGG 245          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|1211228594|ref|XP_021451064.1| (protein lifeguard 4-like [Oncorhynchus mykiss] >gi|1211274975|ref|XP_021421384.1| protein lifeguard 4-like isoform X1 [Oncorhynchus mykiss] >gi|1211274977|ref|XP_021421385.1| protein lifeguard 4-like isoform X2 [Oncorhynchus mykiss])

HSP 1 Score: 159.073 bits (401), Expect = 2.830e-43
Identity = 102/252 (40.48%), Postives = 141/252 (55.95%), Query Frame = 0
Query:  108 SKPPAYPRGMEE---FYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQLFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDKDFSFLGGFCFAGLIGLMVWGLIS-WLTGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQLLGGNRRD 355
            + P  YPR   E    Y    A A  Q            IR+  LRKVYTILSLQ+++T A S LF +   I DFV ++P +  V+ I S   +I L  ++ +HP+NL LL  FTL +S  V    T Y       +VLQAF +T A+F+GLTAYT  S +DFS LG   F+GL  L++ G +  +         ++  GALLF   I+YDT LL  +  P+E + ASI LYLD++NLFL IL++L   +++
Sbjct:    2 TTPEKYPRSSIEDDFNYGTNVATASVQ------------IRMDFLRKVYTILSLQIILTTATSALFMYCDTIKDFVHSSPAVVLVSAIGSLVLIIALAFYRHQHPINLYLLAAFTLLESVSVATAVTFY----EYSIVLQAFFLTAAVFLGLTAYTFQSKRDFSKLGAGLFSGLWILIIAGFMKLFFQNDTVELLFAGAGALLFCGFIIYDTHLLMHQLSPEEHVLASINLYLDIVNLFLHILRMLDSMKKN 237          
BLAST of EWM23688.1 vs. NCBI_GenBank
Match: gi|357115930|ref|XP_003559738.1| (PREDICTED: BI1-like protein [Brachypodium distachyon] >gi|944077894|gb|KQK13246.1| hypothetical protein BRADI_1g08870 [Brachypodium distachyon])

HSP 1 Score: 159.073 bits (401), Expect = 4.659e-43
Identity = 106/248 (42.74%), Postives = 149/248 (60.08%), Query Frame = 0
Query:  109 KPPAYPRGMEEFYDPEAAQAGEQGPSSFMDKTQGEIRLALLRKVYTILSLQLLVTVAVSCLFAFNRGISDFVLATPQ---LFTVALILSFACLIGLFCFKQKHPMNLILLGVFTLCQSFLVGLICTIYYRQGAGELVLQAFGITLAIFVGLTAYTLYSDK---DFSFLGGFCFAGLIGLMVWGLISWL--TGWRSTFWYSLFGALLFSALIVYDTWLLSKRFGPDEAITASIMLYLDVINLFLFILQL 348
            +PP  P+G E   DPEA  A    P   M     ++R A +RKVYTILS+Q+L+T+AV+ +  F R ++ F ++TP    L+   +IL F  L  L+ + Q+HP+NL+LLG+FT+  SF VGL C        GE++L++  +T  + V LTAYT ++ +   DFSFLG F FA ++ LMV+ LI      G  S   Y    AL+F   I+YDT  L KR+  DE + A++ LYLDVINLFL +L L
Sbjct:    4 RPP--PKGPEWGGDPEAGSAAR--PLYPMMLESPQLRWAFVRKVYTILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFGLYIFLIILPFIVLCPLYYYYQRHPVNLLLLGLFTVAISFAVGLTCAF----TKGEVILESAILTAVVVVSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFALIQIFFPLGRVSLMVYGGLAALVFCGYIIYDTDNLIKRYSYDEYVWAAVALYLDVINLFLSLLTL 243          
The following BLAST results are available for this feature:
BLAST of EWM23688.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104842|gb|EWM23688.1|0.000e+0100.00transmembrane bax inhibitor motif-containing prote... [more]
gi|1189393935|gb|OSX80822.1|2.204e-5442.16hypothetical protein BU14_0032s0079 [Porphyra umbi... [more]
gi|545713434|ref|XP_005709020.1|6.351e-5443.08transmembrane BAX inhibitor motif containing 4 iso... [more]
gi|298715791|emb|CBJ28269.1|4.034e-5343.98Homologue of a Golgi anti-apoptotic protein identi... [more]
gi|922860964|gb|KOO28781.1|1.180e-5046.15transmembrane bax inhibitor motif-containing prote... [more]
gi|551588263|ref|XP_005778836.1|4.483e-4640.70hypothetical protein EMIHUDRAFT_353880 [Emiliania ... [more]
gi|224008763|ref|XP_002293340.1|1.381e-4544.93predicted protein, partial [Thalassiosira pseudona... [more]
gi|551664241|ref|XP_005834884.1|1.261e-4440.40hypothetical protein GUITHDRAFT_69344 [Guillardia ... [more]
gi|1211228594|ref|XP_021451064.1|2.830e-4340.48protein lifeguard 4-like [Oncorhynchus mykiss] >gi... [more]
gi|357115930|ref|XP_003559738.1|4.659e-4342.74PREDICTED: BI1-like protein [Brachypodium distachy... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7001rna7001Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications