EWM23670.1, cds6984 (CDS) Nannochloropsis gaditana

Overview
NameEWM23670.1
Unique Namecds6984
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:211376..211523 +
Alignment locationCM002470.1:211904..213177 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23670.1
Productcitrate synthase
Orig transcript idgnl|cribi|Naga_100030g22.4167.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:211376..211523 +
CM002470.1supercontigCM002470.1:211904..213177 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
GO:0006099tricarboxylic acid cycle
GO:0044262cellular carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR016141Citrate_synthase-like_core
IPR019810Citrate_synthase_AS
IPR016142Citrate_synth-like_lrg_a-sub
IPR016143Citrate_synth-like_sm_a-sub
IPR024176Citrate_synthase_bac-typ
IPR002020Citrate_synthase-like
Homology
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|585104824|gb|EWM23670.1| (citrate synthase [Nannochloropsis gaditana])

HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 0 
Query:    1 MASDPADSSLQQAQVRVESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERLLPSTTRARL 473
            MASDPADSSLQQAQVRVESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERLLPSTTRARL
Sbjct:    1 MASDPADSSLQQAQVRVESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERLLPSTTRARL 473
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BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|545703410|ref|XP_005704031.1| (citrate synthase [Galdieria sulphuraria] >gi|452820469|gb|EME27511.1| citrate synthase [Galdieria sulphuraria])

HSP 1 Score: 479.945 bits (1234), Expect = 1.114e-163
Identity = 237/438 (54.11%), Postives = 314/438 (71.69%), Query Frame = 0 
Query:   17 VESQ-GRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARG 453
            +++Q G+   + + +N I+A  L + LG+  YDPG++NTA C SRIT+IDG+KGILRYRGYPIE+LA KS+FME +FLLLYGELP+  +L+HF  RV  H T L   +V +++    ++H M  ++S LAA   L+P+ANPA+ G  VY+S + RE Q+  LLG  PTLAA V   + G      PA   +        R+Y E+F+ +L           P+  +V+ALD + + HADHELNCSTAAVRHLTSS VDV+TA +GA GALYGPLHGGA EAVLRML++IG+ E++PAF+EAVK ++A+LMGFGHRVYKNYDPRA +VR++AY+VF++ G DPLI +AT LE  A  D+YF+ RKLYPN+DFYSGL+YKA+GFP DFF +LF +GR  GWLAHW E L  P  +KKI RP+Q YLG  +R+++P+  R 
Sbjct:   30 IDNQTGQELTLELHNNTIRAVDL-AKLGVTVYDPGFLNTASCISRITYIDGDKGILRYRGYPIEELAEKSTFMEVSFLLLYGELPTSRELEHFTHRVLRH-TFLKQSLVDIIKATPKESHPMGLLVSMLAAEGTLYPDANPAISGGDVYNSPRVREKQILRLLGTMPTLAAFVYRHKMGRPF-NYPAYGGS--------RSYTENFMYMLD--SMEDPSYRPNATLVKALDTLFVLHADHELNCSTAAVRHLTSSDVDVFTAFSGAAGALYGPLHGGANEAVLRMLERIGSVEKVPAFIEAVKNRKARLMGFGHRVYKNYDPRARIVRKLAYQVFEICGKDPLIEIATTLEEHALKDNYFIERKLYPNVDFYSGLIYKAMGFPTDFFTILFAIGRTPGWLAHWLEYLDDP--DKKIARPKQNYLGSDQRSYIPLTQRN 452
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|857978953|emb|CEO95191.1| (hypothetical protein PBRA_003957 [Plasmodiophora brassicae])

HSP 1 Score: 479.559 bits (1233), Expect = 2.069e-163
Identity = 243/455 (53.41%), Postives = 306/455 (67.25%), Query Frame = 0 
Query:    4 DPADSSLQQAQVRVESQGRHGVMSVTHNCIKASKLKSTLG------LMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEAR 452
            DP +S      V     G+   + +  N IKA  L    G      L SYDPGY+NT+  TSRI FIDG+KGIL YRGYPIEQLA KS+F+E AFLL+YG LP++ QL ++  R+  H T +H D+ A++++ R+++H M  +IS ++AMS LHPEANPAL GQ VY+S K R  Q+  +LG  PT+AA     R G        PS        +P +Y E+F+ +L   +       P PR+ RALD + + HADHELNCSTAA+RHL S GVDVYT VAGA GALYGP HGGA EAVLRML+ IG+ + IP F+  VKA++  LMGFGHRVYKNYDPRA ++R+VA EVFQ+ G +PLI VA ALE  A +D YF+ RKLYPN+DFYSGL+YKA+GFP D FPVLF + R AGWLAHW E L  PE   +I+RPRQ+YLG   R ++ I  R
Sbjct:   23 DPKNS----LTVTDNRTGKKYQLPIYENTIKAEDLGKIKGIPNEPGLRSYDPGYLNTSSATSRICFIDGDKGILTYRGYPIEQLAEKSTFLEVAFLLIYGSLPTKDQLDYWSNRIMRH-TFIHDDLAAMMKSFRYNSHPMGMLISTVSAMSTLHPEANPALSGQDVYNSAKLRNKQIHRILGTMPTIAAFAYRHRIGRPYVW---PS-------HKPLSYTENFMFMLD--QLSNPNYAPHPRLARALDILFILHADHELNCSTAAMRHLASGGVDVYTCVAGAAGALYGPKHGGANEAVLRMLESIGSVDNIPQFIANVKARKVLLMGFGHRVYKNYDPRARIIRQVAEEVFQILGREPLIEVAVALEKIALADPYFIKRKLYPNVDFYSGLIYKAMGFPTDMFPVLFAIPRTAGWLAHWVEFLADPEN--RIIRPRQVYLGADRRDYVDINKR 458
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|330833865|ref|XP_003291998.1| (citrate synthase [Dictyostelium purpureum] >gi|325077803|gb|EGC31493.1| citrate synthase [Dictyostelium purpureum])

HSP 1 Score: 474.937 bits (1221), Expect = 1.916e-161
Identity = 237/453 (52.32%), Postives = 309/453 (68.21%), Query Frame = 0 
Query:   18 ESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERLLPSTTR 470
            E + ++G ++ T N  + S+ K   GLM YDPG+ NTAV TS IT+IDG+KGILRYRGYPIE+LA +S+F+E A+LL+ G LP+++QL  +  ++  H T LH ++V L++T R+DAH M  +IS +AA+   +PE+NPAL GQ ++ S   R  Q++ ++G  PT+AA     R G                P     Y E+FL +L   K    +  P+P + RAL+ + + HADHELNCSTAA+RH++SSG D YT+VAGA GALYGPLHGGA EAVL ML  IGT+E IP F+  VKAK+ KLMGFGHR+YKNYDPRA ++R VAYEVF+  G +PLI VAT LE  A SD+YFVSRKLYPN+DFYSGL+YKA+GFP D FPVLFT+ R  GWLAHW E L  P  E KI RPRQ+Y G   R ++PIE R   ++ ++      +T R
Sbjct:   50 EFKIKNGTVNAT-NFKQLSENKEDGGLMIYDPGFQNTAVVTSYITYIDGDKGILRYRGYPIEELAERSTFLEVAYLLINGNLPNKSQLDGWSHKIMTH-TFLHENLVGLMKTFRYDAHPMGMLISTVAALGTFYPESNPALAGQDIFKSESARNKQIYRIVGKLPTIAACAWRHRIGRPYNT-----------PVNHLGYTENFLYMLD--KLSENDYKPNPVLCRALEILFILHADHELNCSTAAMRHISSSGTDPYTSVAGAAGALYGPLHGGANEAVLDMLVHIGTKENIPQFIADVKAKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFESLGKEPLIEVATELEKQALSDEYFVSRKLYPNVDFYSGLIYKAMGFPTDMFPVLFTIPRAVGWLAHWVEHLEDP--ETKIYRPRQVYKGEWFRNYVPIEGRPPAKVRSQDSYSSSTTKR 485
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|1013948756|gb|KYR02419.1| (citrate synthase [Dictyostelium lacteum])

HSP 1 Score: 474.167 bits (1219), Expect = 3.063e-161
Identity = 232/428 (54.21%), Postives = 294/428 (68.69%), Query Frame = 0 
Query:   43 GLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERLLPSTTR 470
            GLM YDPG+ NTAV TS IT+IDG+KGILRYRGYPIE+LA +S+F+E A+LL+ G LP+++QL  +  ++  H T LH ++VA+++T R+DAH M  VIS +AA+   +PE+NPAL GQ ++ S   R  Q+F ++G  PT+AA     R G                P     Y E+FL +L   K    +  P+P + RAL+ + + HADHELNCSTAA+RH+ SSG D YTAVAGA GALYGPLHGGA EAVL ML  IGT+E IP F+  VK K+ KLMGFGHR+YKNYDPRA ++R VAYEVF+  G +PLI VAT LE  A SD+YFVSRKLYPN+DFYSGL+YKA+GFP D FPVLF + R  GWLAHW E L  P  E KI RPRQ+Y G   R ++PIE R   ++ ++      +T R
Sbjct:   75 GLMIYDPGFQNTAVVTSYITYIDGDKGILRYRGYPIEELAERSNFLEVAYLLINGNLPNKSQLDQWNNKIMTH-TFLHENLVAMMKTFRYDAHPMGMVISTVAALGTFYPESNPALAGQEIFKSESVRNKQIFRIVGKLPTIAASAWRHRIGRPYNT-----------PVNHLGYTENFLYMLD--KLSEPDYKPNPVLCRALEILFILHADHELNCSTAAMRHIASSGTDPYTAVAGAAGALYGPLHGGANEAVLDMLTHIGTKENIPQFIADVKGKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFESLGKEPLIEVATELEKQALSDEYFVSRKLYPNVDFYSGLIYKAMGFPTDMFPVLFMIPRAVGWLAHWVEHLEDP--ETKIYRPRQVYKGEWYRNYIPIEGRPPAKVRSQDSYSSSTTKR 486
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|225446893|ref|XP_002284064.1| (PREDICTED: citrate synthase, glyoxysomal [Vitis vinifera] >gi|296086334|emb|CBI31775.3| unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 473.781 bits (1218), Expect = 9.170e-161
Identity = 244/471 (51.80%), Postives = 327/471 (69.43%), Query Frame = 0 
Query:    7 DSSLQQAQVRVESQGRHGVMSVTHNCIKASKLKSTLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERL----LPSTTRARL 473
            D + ++ QV+V S   HG +  T +  K +   +  GL  YDPGY+NTA   S I +IDG+ GILRYRGYPIE+LA  SSF+E A+LL+YG LPSE+QL  +   V  H +A+   I+ ++Q + HDAH M  ++SA++A+S  HP+ANPAL GQ +Y S++ R+ Q+  +LG  PT+AA   LR +G   P LP+ S +          Y E+FL +L     R  +  P+PR+ R LD + + HA+HE+NCSTAA RHL+SSGVDVYTA+AGA GALYGPLHGGA EAVL+ML +IGT E IP F+E VK ++ K+ GFGHRVYKNYDPRA +++++A EVF + G DPLI VA ALE AA SD+YF+ RKLYPN+DFYSGL+Y+A+GFP +FFPVLF + RMAG+LAHW E L  P  + KI+RP+Q+Y G   R F+P++ R    ++AE +RL    + + TR RL
Sbjct:   60 DRTAKKYQVQVSS---HGTVKAT-DLKKITTGNNDKGLKLYDPGYLNTAPVRSSICYIDGDAGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLADWEFAVSQH-SAVPQGILDIIQAMPHDAHPMGVLVSAMSALSVFHPDANPALRGQDLYQSKQVRDKQIARVLGKAPTIAAAAYLRMAGRP-PVLPSSSFS----------YSENFLYMLDSLSNRSYK--PNPRLARVLDILFILHAEHEMNCSTAAARHLSSSGVDVYTALAGAVGALYGPLHGGANEAVLKMLSEIGTIENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFIKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLAHWRESLDDP--DTKIMRPQQVYTGEWLRHFMPVKER---MMSAEADRLGQVSISNATRRRL 507
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|145490791|ref|XP_001431395.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124398500|emb|CAK63997.1| unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 471.855 bits (1213), Expect = 1.563e-160
Identity = 221/420 (52.62%), Postives = 299/420 (71.19%), Query Frame = 0 
Query:   44 LMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPER 463
            L  YDPGYMNT  CTS+I++IDG+KGIL YRG PIE+LA KS+F+E A+LL+ GELPS++QL+ +  ++  H T +H D   ++++ R+DAH M  +IS LAA+S  HPE NPAL G+GVY ++     Q++ +LG+ PT+A++    R G                P    +YVE+FL +L   K    E  P P++ RAL+ + + HA+HELNCSTA VRHL+SSGVD+YTA+AGA GALYGP HGGA EAVLRML++IG  + IP F++ VK ++  LMGFGHRVYKNYDPRA +V+++AY+VF++ G +PLI +A  LE  A SD YF+ RKLYPN+DFYSG++Y+A+GFP D FPVLFT+ R+AGWLAHW+E L   ++E  IVRPRQ Y+GP +R ++P+E R    I  E  +
Sbjct:   54 LRVYDPGYMNTICCTSKISYIDGDKGILEYRGIPIEELAEKSTFVEVAYLLINGELPSKSQLQEWDEKLRKH-TFIHTDASQMMKSFRYDAHPMGMLISTLAAISTFHPEVNPALAGEGVYKNKDIVNKQIYRILGSLPTIASNSFRNRIGREHNM-----------PHENMSYVENFLYMLD--KLNEKEYKPHPKITRALEVLFILHAEHELNCSTAFVRHLSSSGVDIYTAIAGAAGALYGPKHGGANEAVLRMLEEIGDLKNIPQFIKDVKDRKKLLMGFGHRVYKNYDPRAKIVKQIAYQVFEITGKEPLIEIAIELEKIALSDPYFIQRKLYPNVDFYSGVIYRALGFPTDMFPVLFTIPRVAGWLAHWKEYLN--DKENNIVRPRQNYVGPEKRNYVPVEQRKEFPIYLESNK 457
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|595966729|ref|XP_007217210.1| (citrate synthase, glyoxysomal [Prunus persica] >gi|1139783782|gb|ONI17609.1| hypothetical protein PRUPE_3G169400 [Prunus persica])

HSP 1 Score: 469.159 bits (1206), Expect = 6.204e-159
Identity = 236/437 (54.00%), Postives = 307/437 (70.25%), Query Frame = 0 
Query:   22 RHGVMSVTHNCIKASKLK------STLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEAR 452
            R+ V       IKA+ LK      +  GL  YDPGY+NTA   S I +IDG++GILRYRGYPIE+LA +S+F+E A+LL+YG LPSE+QL  +   +  H +A+   I+ ++Q I HDAH M  ++SA++A+S  HP+ANPAL GQ VY S++ R+ Q+  +LG  PT+AA   LR +G     LPA +L+          Y E+FL +L     R  +  P+PR+ R +D + + HA+HE+NCSTAA RHL SSGVDVYTA+AGATGALYGPLHGGA EAVL+ML +IGT E IP F+E VK ++ K+ GFGHRVYKNYDPRA ++R++A EVF + G DPLI VA ALE AA SD+YFV RKLYPN+DFYSGL+Y+A+GFP +FFPVLF + RMAGWLAHW E L  P  + KI+RP+Q+Y G   R ++P   R
Sbjct:   67 RYQVQVSEEGTIKAADLKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAERSTFLEVAYLLMYGNLPSESQLADWEFAISQH-SAVPQGILDIIQAIPHDAHPMGVLVSAMSALSVFHPDANPALRGQDVYKSKQVRDKQIARILGKAPTIAAAAYLRLAGRPA-VLPANNLS----------YAENFLYMLDSLGNRSYK--PNPRLARVVDVLFILHAEHEMNCSTAAARHLASSGVDVYTALAGATGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGWLAHWRESLDDP--DTKIMRPQQVYTGNWLRHYIPPRER 487
[Close]
BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|694448031|ref|XP_009350010.1| (PREDICTED: citrate synthase, glyoxysomal [Pyrus x bretschneideri])

HSP 1 Score: 468.389 bits (1204), Expect = 1.419e-158
Identity = 237/438 (54.11%), Postives = 306/438 (69.86%), Query Frame = 0 
Query:   22 RHGVMSVTHNCIKASKLK------STLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLL-GLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEAR 452
            R+ V       +KA+ LK      +  GL  YDPGY+NTA   S I +IDG++GILRYRGYPIE+LA  S+F+E A+LL+YG LPSE+Q   +   V  H +A+   I+ ++Q I HDAH M  ++SA++A+S  HP+ANPAL GQ +Y S++ R+ Q+  +LG  PT+AA   LR +G   P LPA +L+          Y E+FL +L  LG        P+PR+ R LD + + HA+HE+NCSTAA RHL SSGVDVYTA+AGATGALYGPLHGGA EAVL+ML +IGT E IP F+E VK ++ K+ GFGHRVYKNYDPRA ++R++A EVF + G DPLI VA ALE AA SD+YFV RKLYPN+DFYSGL+Y+A+GFP +FFPVLF + RMAGWLAHW E L  P  + KI+RP+Q+Y G   R ++P   R
Sbjct:   67 RYQVQVSDEGTVKATDLKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSTFLEVAYLLMYGNLPSESQYADWEFAVSQH-SAVPQGILDIIQAIPHDAHPMGVLVSAMSALSVFHPDANPALRGQEIYKSKQVRDKQIARILGKAPTIAAAAYLRLAGRP-PVLPANNLS----------YSENFLYMLDSLGNR---SYKPNPRLARVLDVLFILHAEHEMNCSTAAARHLASSGVDVYTALAGATGALYGPLHGGANEAVLKMLNEIGTVENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGWLAHWRESLDDP--DTKIMRPQQVYTGNWLRHYIPPRER 487
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BLAST of EWM23670.1 vs. NCBI_GenBank
Match: gi|1040863800|ref|XP_017242390.1| (PREDICTED: citrate synthase, glyoxysomal-like [Daucus carota subsp. sativus])

HSP 1 Score: 467.233 bits (1201), Expect = 3.130e-158
Identity = 240/462 (51.95%), Postives = 320/462 (69.26%), Query Frame = 0 
Query:   22 RHGVMSVTHNCIKASKLK------STLGLMSYDPGYMNTAVCTSRITFIDGEKGILRYRGYPIEQLASKSSFMETAFLLLYGELPSEAQLKHFCARVYHHQTALHADIVALLQTIRHDAHCMTSVISALAAMSALHPEANPALEGQGVYSSRKTRESQMFTLLGAFPTLAAHVLLRRSGSSVPCLPAPSLATLLDPARPRAYVEHFLVLLGLGKARPGEEGPDPRVVRALDAILLAHADHELNCSTAAVRHLTSSGVDVYTAVAGATGALYGPLHGGATEAVLRMLQQIGTEERIPAFLEAVKAKEAKLMGFGHRVYKNYDPRAVLVREVAYEVFQVYGADPLIHVATALETAARSDDYFVSRKLYPNIDFYSGLVYKAIGFPLDFFPVLFTMGRMAGWLAHWEELLMGPEEEKKIVRPRQIYLGPAERAFLPIEARGHVRIAAEPERL----LPSTTRARL 473
            ++ V    H  IKA+ LK      +  GL  YDPGY+NTA   S I +IDG++GILRYRGYPIEQLA  SSF+E A+LLLYG LPS +QL  +   V  H +A+   I+ ++Q + HDAH M  ++SA++ +S  HP+ANPAL+GQ +Y+S++ R+ Q+  +LG  PT+AA   LR +G   P LP+ SL+          Y E+FL +L     R  +  P+PR+ R LD + + HA+HE+NCSTAA RHL SSGVDVYTA+AGA GALYGPLHGGA EAVL+ML +IGT ++IP F+E VK ++ K+ GFGHRVYKNYDPRA +++++A EVF + G DPLI VA ALE AA SD+YFV RKLYPN+DFYSGL+Y+A+GFP +FFPVLF + RMAG+L+HW+E L  P  + KI+RP Q+Y G   R ++P   R    +A E ++L    + + TR RL
Sbjct:   62 KYQVQVSDHGTIKATDLKKITTGKNDKGLKLYDPGYINTAPVRSSICYIDGDEGILRYRGYPIEQLAESSSFLEVAYLLLYGNLPSTSQLSDWEFAVSQH-SAVPQGILDIIQAMPHDAHPMGVLVSAMSTLSIFHPDANPALKGQDLYNSKEVRDKQIVRILGKAPTIAAAAYLRMAGRP-PVLPSNSLS----------YSENFLYMLDSLGNRSYK--PNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLSEIGTLDKIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIEVAIALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPTEFFPVLFAIPRMAGYLSHWKESLNDP--DTKIMRPAQVYTGVWLRPYIPQRER---MVATETDKLGQISVSNATRRRL 504
The following BLAST results are available for this feature:
BLAST of EWM23670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104824|gb|EWM23670.1|0.000e+0100.00citrate synthase [Nannochloropsis gaditana][more]
gi|545703410|ref|XP_005704031.1|1.114e-16354.11citrate synthase [Galdieria sulphuraria] >gi|45282... [more]
gi|857978953|emb|CEO95191.1|2.069e-16353.41hypothetical protein PBRA_003957 [Plasmodiophora b... [more]
gi|330833865|ref|XP_003291998.1|1.916e-16152.32citrate synthase [Dictyostelium purpureum] >gi|325... [more]
gi|1013948756|gb|KYR02419.1|3.063e-16154.21citrate synthase [Dictyostelium lacteum][more]
gi|225446893|ref|XP_002284064.1|9.170e-16151.80PREDICTED: citrate synthase, glyoxysomal [Vitis vi... [more]
gi|145490791|ref|XP_001431395.1|1.563e-16052.62hypothetical protein [Paramecium tetraurelia strai... [more]
gi|595966729|ref|XP_007217210.1|6.204e-15954.00citrate synthase, glyoxysomal [Prunus persica] >gi... [more]
gi|694448031|ref|XP_009350010.1|1.419e-15854.11PREDICTED: citrate synthase, glyoxysomal [Pyrus x ... [more]
gi|1040863800|ref|XP_017242390.1|3.130e-15851.95PREDICTED: citrate synthase, glyoxysomal-like [Dau... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7000rna7000Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications