EWM23664.1, cds6983 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|585104818|gb|EWM23664.1| (PUB domain protein [Nannochloropsis gaditana]) HSP 1 Score: 853.973 bits (2205), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0
Query: 1 MNYLKGALGLKKDKGNVLGNEVNTSRPSGPSNSAPTRETRSGSFSTYDAVFDGNDALLGMTIACSQTGIPVVGSLVSGGAASRKGVHIGDIVMSVDGNPVTSYESLEVALCAMERPVTFSFHRSGKSDLVQPVARPTLPPSDESGDVERRRRILTAAEERSRAWDRKVQKAGGNHRGASKKSGEGLDRFGANDDEATKAQVAQIKKFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQDPLELPPLS 418
MNYLKGALGLKKDKGNVLGNEVNTSRPSGPSNSAPTRETRSGSFSTYDAVFDGNDALLGMTIACSQTGIPVVGSLVSGGAASRKGVHIGDIVMSVDGNPVTSYESLEVALCAMERPVTFSFHRSGKSDLVQPVARPTLPPSDESGDVERRRRILTAAEERSRAWDRKVQKAGGNHRGASKKSGEGLDRFGANDDEATKAQVAQIKKFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQDPLELPPLS
Sbjct: 1 MNYLKGALGLKKDKGNVLGNEVNTSRPSGPSNSAPTRETRSGSFSTYDAVFDGNDALLGMTIACSQTGIPVVGSLVSGGAASRKGVHIGDIVMSVDGNPVTSYESLEVALCAMERPVTFSFHRSGKSDLVQPVARPTLPPSDESGDVERRRRILTAAEERSRAWDRKVQKAGGNHRGASKKSGEGLDRFGANDDEATKAQVAQIKKFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQDPLELPPLS 418
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|298707789|emb|CBJ30220.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 123.635 bits (309), Expect = 6.114e-28 Identity = 107/389 (27.51%), Postives = 177/389 (45.50%), Query Frame = 0
Query: 58 LGMTIACSQTGIPVVGSLVSGGAASRKGVHIGDIVMSVDGNPV-TSYESLEVALCAMERPVTFSFHRS-----------------GKSDLVQPVAR---------PTLPPSDESGDVERRRRILTAAEERSRAWDRKVQKAGGNHRGASKKSGEG---LDRFGANDDEATKAQVAQIKKFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLS-----GDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQ---VLEDT 408
LG++++ G V + +GGAA++ GV + D + ++DGN ++E L + A+ RPV FHRS G Q AR P PP ERR L AAE R++ W++++ K + + KSG G ++F + + T+ V K+ EA +++GYNPYE+ M A A I AG + +G +PL S P P T + + + G++ ++ + + A+ +L++ TA +T+L ++ N+ A + +KF+R+RL NA F SKV + G ++++ AAGF + E L GP VPLR V ++ Q +L+D+
Sbjct: 5 LGISLSPGPNGESRVTGVSNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDVVRAIGRPVVIGFHRSGGGGKEAKGAGATAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWNKRLNKG---RQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTASSMGYNPYEARLMGNTAARAAISGAGDSGAG----------APLTSPPPPDRQATTPPPAAAAAATANLGEKEEWIGEEAAMADAVAAEIEG------ALGAVLEQEPGVSLTAVTTMLKMMKNMTAKSSDDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQH-GPCDPVPLRLTVAIRKLAQAEAMLKDS 373
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|567951247|gb|ETK76950.1| (hypothetical protein L915_16726 [Phytophthora parasitica] >gi|568009407|gb|ETL83610.1| hypothetical protein L917_16455 [Phytophthora parasitica]) HSP 1 Score: 92.0485 bits (227), Expect = 3.502e-17 Identity = 83/286 (29.02%), Postives = 136/286 (47.55%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQT-AALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQ 409
PP+ + + ++RR + A E+R AW+++V N R A + E L+ +F + ++ A+ + Q+K E +G+NPY + S QA++ + G R S A S N PPP+ P S P ++ +P+++E + A+ ++L + P TAA T++ +L NV +P +EKFR++RL NAA QSK+V+VPGAVD+L AGF D E +L L A + R+Q ++ T+
Sbjct: 62 PPALSAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQQEEELENKFEYTEASSSTAEASPSGPPPVVLSNEQVKARELQNVHQQMGFNPYAATFSSSTQAVSAMNSIG--------RGSTAPPSAPNGDAVPPPA--PFSAIPPVAAPSVVSSSPVTEE--------------NGAVYVLLRQDPPRAITAAETLIKMLTNVAKNPQEEKFRKIRLSNAAIQSKLVSVPGAVDILAEAGFLRVELDGEGYLMLTADAFQA--------ERVQAAIDRTE 311
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|566013845|gb|ETI36756.1| (hypothetical protein F443_17186 [Phytophthora parasitica P1569] >gi|567979906|gb|ETL30378.1| hypothetical protein L916_16635 [Phytophthora parasitica] >gi|568039317|gb|ETM36813.1| hypothetical protein L914_16561 [Phytophthora parasitica] >gi|570317507|gb|ETO65455.1| hypothetical protein F444_17227 [Phytophthora parasitica P1976] >gi|570941297|gb|ETP06554.1| hypothetical protein F441_17059 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 92.0485 bits (227), Expect = 3.604e-17 Identity = 80/266 (30.08%), Postives = 129/266 (48.50%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQT-AALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALE 389
PP+ + + ++RR + A E+R AW+++V N R A + E L+ +F + ++ A+ + Q+K E +G+NPY + S QA++ + G R S A S N PPP+ P S P ++ +P+++E + A+ ++L + P TAA T++ +L NV +P +EKFR++RL NAA QSK+V+VPGAVD+L AGF D E +L L A +
Sbjct: 62 PPALSAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQQEEELENKFQYTEASSSTAEASPSGPPPVVLSNEQVKARELQNVHQQMGFNPYAATFSSSTQAVSAMNSIG--------RGSTAPPSAPNGDAVPPPA--PFSAIPPVAAPSVVSSSPVTEE--------------NGAVYVLLRQDPPRAITAAETLIKMLTNVAKNPQEEKFRKIRLSNAAIQSKLVSVPGAVDILAEAGFLRVELDGEGYLMLTADAFQ 299
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|675207317|ref|XP_008912543.1| (hypothetical protein PPTG_16792 [Phytophthora parasitica INRA-310] >gi|568087286|gb|ETN02160.1| hypothetical protein PPTG_16792 [Phytophthora parasitica INRA-310]) HSP 1 Score: 91.2781 bits (225), Expect = 7.273e-17 Identity = 80/262 (30.53%), Postives = 127/262 (48.47%), Query Frame = 0
Query: 144 SGDVERRRRILTAA--EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQT-AALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALE 389
S + +++RR L A E+R AW+++V N R A + E L+ +F + ++ A+ + Q+K E +G+NPY + S QA++ + G R S A S N PPP+ P S P ++ +P+++E + A+ ++L + P TAA T++ +L NV +P +EKFR++RL NAA QSK+V+VPGAVD+L AGF D E +L L A +
Sbjct: 66 SAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQQEEELENKFQYTEASSSTAEASPSGPPPVVLSNEQVKARELQNVHQQMGFNPYAATFSSSTQAVSAMNSIG--------RGSTAPPSAPNGDAVPPPA--PFSAIPPVAAPSVVSSSPVTEE--------------NGAVYVLLRQDPPRAITAAETLIKMLTNVAKNPQEEKFRKIRLSNAAIQSKLVSVPGAVDILAEAGFLRVELDGEGYLMLTADAFQ 299
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|570971529|gb|ETP34648.1| (hypothetical protein F442_17060 [Phytophthora parasitica P10297] >gi|970642699|gb|KUF84274.1| Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Phytophthora nicotianae] >gi|970654069|gb|KUF92435.1| hypothetical protein AM588_10004052 [Phytophthora nicotianae]) HSP 1 Score: 90.8929 bits (224), Expect = 1.048e-16 Identity = 79/266 (29.70%), Postives = 128/266 (48.12%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQT-AALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALE 389
PP+ + + ++RR + A E+R AW+++V N R A + E L+ +F + ++ + + Q+K E +G+NPY + S QA++ + G R S A S N PPP+ P S P ++ +P+++E + A+ ++L + P TAA T++ +L NV +P +EKFR++RL NAA QSK+V+VPGAVD+L AGF D E +L L A +
Sbjct: 62 PPALSAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQQEEELENKFQYTEASSSTTEASPSGPPPVVLSNEQVKARELQNVHQQMGFNPYAATFSSSTQAVSAMNSIG--------RGSTAPPSAPNGDAVPPPA--PFSAIPPVAAPSVVSSSPVTEE--------------NGAVYVLLRQDPPRAITAAETLIKMLTNVAKNPQEEKFRKIRLSNAAIQSKLVSVPGAVDILAEAGFLRVELDGEGYLMLTADAFQ 299
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|970636210|gb|KUF80925.1| (hypothetical protein AM587_10015343 [Phytophthora nicotianae]) HSP 1 Score: 91.6633 bits (226), Expect = 1.664e-16 Identity = 79/266 (29.70%), Postives = 128/266 (48.12%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQT-AALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALE 389
PP+ + + ++RR + A E+R AW+++V N R A + E L+ +F + ++ + + Q+K E +G+NPY + S QA++ + G R S A S N PPP+ P S P ++ +P+++E + A+ ++L + P TAA T++ +L NV +P +EKFR++RL NAA QSK+V+VPGAVD+L AGF D E +L L A +
Sbjct: 62 PPALSAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQQEEELENKFQYTEASSSTTEASPSGPPPVVLSNEQVKARELQNVHQQMGFNPYAATFSSSTQAVSAMNSIG--------RGSTAPPSAPNGDAVPPPA--PFSAIPPVAAPSVVSSSPVTEE--------------NGAVYVLLRQDPPRAITAAETLIKMLTNVAKNPQEEKFRKIRLSNAAIQSKLVSVPGAVDILAEAGFLRVELDGEGYLMLTADAFQ 299
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|953491923|emb|CEG45500.1| (Predicted ubiquitin regulatory protein [Plasmopara halstedii]) HSP 1 Score: 84.7297 bits (208), Expect = 1.265e-14 Identity = 83/287 (28.92%), Postives = 132/287 (45.99%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLDRFGANDDEATKAQVAQIKKFEAAQTAALGYNPYE-SHSMSRAQALARIEL-AGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLS----------QEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQDPL 412
PP D ++RR + A E+R AW+++V A++K+ R D++ K Q A E + A G +P S+ +A+ L ++ G P + +S A+S +N+ + GD P A S ++ +PE + E + L+ P A TA+ T++ IL NV+ P +EKFRR+RL NAA Q+K+V+VPGAVD+L AGF + + E++L LP A + RIQ ++ T+ L
Sbjct: 62 PPILSVDDQQKRRELQAQALEQRGNAWEKRV--------AAARKA-----RLQQEDEQENKFQYA-----EPSVPAPSGPSPQMLSNEQVKARELQTVQQQMGFNPYAATFASSTQAVSAMNA----------------IGGDLPPMTASSSVVPPPIPFPAIPQVTAPEDTLSTLENGAVYVLLRQDPQRAI-TASETLIKILNNVIQTPEEEKFRRIRLSNAAIQTKLVSVPGAVDILEEAGFTKVVLEGESYLMLPADAFQA--------QRIQAAIDRTEVAL 305
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|301101694|ref|XP_002899935.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102510|gb|EEY60562.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 81.6481 bits (200), Expect = 1.372e-13 Identity = 78/267 (29.21%), Postives = 125/267 (46.82%), Query Frame = 0
Query: 139 PPSDESGDVERRRRILTAA-EERSRAWDRKVQKAGGNHRGASKKSGEGLD-RFGANDDEATKAQVA------------QIKKFEAAQTA--ALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPFVAPLSQEELESPEAFQAGEEADSAMALMLDRPLPAWRTAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALE 389
PP+ + + ++RR + A E+R AW+++V N R A + E L+ +F + + A+ A Q+K E Q+A +G+NPY + S QA++ I G S +SP P P P+ P +P L+ ++ + A+ ++L + P TAA T++ +L NVL +P +EKFR++RL NAA QSK+ +VPGAV +L AGF + E +L L A +
Sbjct: 62 PPALSAEEQQKRRELQAKALEQRGNAWEKRV----ANGRKARLQEEEELESKFQYAEPASLTAEAAPSGPPPVLLSNEQVKAREL-QSAHQQMGFNPYAATFSSSTQAVSAINGIGAEAIAPPPAPSGDTISP----PAPFPA-IPQVAAPD---------GVLTNSDVAE----------NGAVYVLLRQDPPRAITAAETLIKMLANVLKNPQEEKFRKIRLSNAAIQSKLTSVPGAVGILAEAGFSRVELEGEVYLMLIADAFQ 299
BLAST of EWM23664.1 vs. NCBI_GenBank
Match: gi|695412353|ref|XP_009525717.1| (hypothetical protein PHYSODRAFT_544514 [Phytophthora sojae] >gi|348676842|gb|EGZ16659.1| hypothetical protein PHYSODRAFT_544514 [Phytophthora sojae]) HSP 1 Score: 77.411 bits (189), Expect = 3.864e-12 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 0
Query: 301 EEADSAMALMLDRPLPAWR-TAASTVLTILGNVLADPAQEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFCYTMEDQETFLSLPGPALEVPLRARVIYYRIQQVLEDTQDPL 412
E A++ +L R PA TAA T++ +L NV+ +P +EKFR+ RL NAA QSK+VAVPGAVD+L AGF D E +L L A + R+Q ++ T+ L
Sbjct: 213 EAAENGAVYVLLRQDPARAITAAETLIKMLTNVVKNPQEEKFRKARLSNAAIQSKLVAVPGAVDILAEAGFTRMELDGEVYLMLTADAFQAE--------RVQSAIDRTEVAL 317 The following BLAST results are available for this feature:
BLAST of EWM23664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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