EWM23705.1, cds6982 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|585104859|gb|EWM23705.1| (Protein-tyrosine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 758.829 bits (1958), Expect = 0.000e+0 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query: 1 MEGAQDLNKAAGTHYGLAVAEDGADKEQVREKQKETATEGCSDTMSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKTEKPPRQEGARTKSASSVAETARGQREINNETLGPSLGQKEGSWRRHSEGSILQDNEAAHERSEIAGDTLSCVGANSVIKWSNSRLTHEKEACICKGTF 362
MEGAQDLNKAAGTHYGLAVAEDGADKEQVREKQKETATEGCSDTMSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKTEKPPRQEGARTKSASSVAETARGQREINNETLGPSLGQKEGSWRRHSEGSILQDNEAAHERSEIAGDTLSCVGANSVIKWSNSRLTHEKEACICKGTF
Sbjct: 1 MEGAQDLNKAAGTHYGLAVAEDGADKEQVREKQKETATEGCSDTMSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKTEKPPRQEGARTKSASSVAETARGQREINNETLGPSLGQKEGSWRRHSEGSILQDNEAAHERSEIAGDTLSCVGANSVIKWSNSRLTHEKEACICKGTF 362
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|545368680|ref|XP_005649118.1| (hypothetical protein COCSUDRAFT_62003 [Coccomyxa subellipsoidea C-169] >gi|384251096|gb|EIE24574.1| hypothetical protein COCSUDRAFT_62003 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 173.711 bits (439), Expect = 2.613e-44 Identity = 89/233 (38.20%), Postives = 129/233 (55.36%), Query Frame = 0
Query: 55 ASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKT-------EKPPRQEGARTKSASS 280
+SVLQK+ KW DY +YG PVG +R +PMKTP++ +E+ + + P+ V TIQ ++Q GRTIGL++DLSNHE LY +DL+ + Y H VAK+ P N V + Y +P+ Y+AIHC+YG+NRTG++ AYL++ R + DALA F ARPPG+KHE F+ E RY + E+ P ++ A ++A +
Sbjct: 44 SSVLQKLQKWADYQSYGEPVGPTRFLPMKTPMS---------------------SEIIENWSLDEPPQ---HVLTIQSLRKDQQEKGRTIGLIIDLSNHETLYADDLQ-AVDGIQYTHIPLVAKSFPPANAITQVIKTAKSYWKEHPKKYIAIHCAYGFNRTGFVVCAYLIQVCRLSVLDALACFGAARPPGVKHEKFVVELSRRYGTRLPSVPAAPEREPNEDAADVRAAQA 251
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|255080378|ref|XP_002503769.1| (predicted protein [Micromonas commoda] >gi|226519036|gb|ACO65027.1| predicted protein [Micromonas commoda]) HSP 1 Score: 162.925 bits (411), Expect = 7.780e-44 Identity = 98/268 (36.57%), Postives = 135/268 (50.37%), Query Frame = 0
Query: 1 MEGAQDLNKAAGTHYGLAVAEDG--ADKEQVREKQKETATEGCSDT------MSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
M G + +AAG A G AD+E + C+ T +T + +V +VL K+ KW DYA+YG PV SR IPMKTPL+ L A S P+ + T+ KF+ EQ LGR +GL++DLSNH+CLY + + D V H VAK+IP+ +V + + + P+ YVAIHC+YG+NRTG++ YL++ L +A AL AFA AR PG+KHE F RY
Sbjct: 1 MSGPEHAPRAAGAEASSAPVASGKVADQEAQARPASSWGDDSCASTSTTSHVFNTAVTENNVPTVLSKLQKWGDYASYGEPVAPSRFIPMKTPLSPTLLAKD---AEESLPN----------------------ILTLPKFLAEQRALGRKVGLIIDLSNHDCLYSDGVPPDLERV---HVRNVAKSIPNVECTDEVIAVASEFWSRRPDEYVAIHCAYGFNRTGFVLCCYLIQALGMSAERALEAFAAAREPGVKHERFREALRRRY 240
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|612392059|ref|XP_007511550.1| (predicted protein [Bathycoccus prasinos] >gi|412988335|emb|CCO17671.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 162.54 bits (410), Expect = 1.568e-42 Identity = 87/223 (39.01%), Postives = 124/223 (55.61%), Query Frame = 0
Query: 46 STTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQ-AILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKTEKP 267
+T +P A+VL K+ KW DY + G VG+++ +PMKTPL+LE + E + T++K + EQ R + +++DLSNHECLYEED+ ++ V H +AK+IP+ C V R T + +PE Y+AIHC+YG+NRTG+I +YL+E+ TA +AL AFA ARPPG+KHE F ARY + KP
Sbjct: 162 NTDQIPYEKATVLTKLQKWGDYESCGENVGKTKFVPMKTPLSLEFL---------------------------EQMEKYAHILTVEKMLYEQRETKQREVTMIIDLSNHECLYEEDIPKEVHRV---HVRNIAKSIPNIECCSKVMREATKHWKKHPEQYIAIHCAYGFNRTGFIVCSYLIEKENMTAEEALEAFAIARPPGVKHERFQLALKARYPTRGCKP 354
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|308803466|ref|XP_003079046.1| (mRNA capping enzyme, guanylyltransferase (alpha) subunit (ISS) [Ostreococcus tauri]) HSP 1 Score: 151.754 bits (382), Expect = 6.175e-40 Identity = 93/254 (36.61%), Postives = 136/254 (53.54%), Query Frame = 0
Query: 18 AVAEDGADKEQVREKQKETATEGCSDTMSTTMLPQSVA------SVLQKITKWKDYANYGNPVGESRVIPMKTPLT---LELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNP--EHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
AVAED ++ + E A EG + T +P++ A SVL+K+ KW DY + G+ V +++IPMKTPL+ +E + AH T+ ++EQ LGR IGL+VDL+NH+CLYEED+ VS H VAK +P CR + + +L+ + + YVA+HC+YG+NRTG++ +LVE L + +AL FA+ARPPG+KH+HF E + RY
Sbjct: 7 AVAED--ERPVMPRVSDERAREGVE---AGTSMPETGAVDAEAPSVLKKLQKWGDYESCGDVVRGTKLIPMKTPLSARYVEDRCAH--------------------------------ALTMDILLREQRALGREIGLIVDLTNHDCLYEEDVP---ASVSRTHVRNVAKTVPSVGDCRRASKVVNDFLSSDAGKDRYVAVHCAYGFNRTGFMICCHLVETLGVSPEEALELFAEARPPGLKHQHFRCELIERY 220
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|693500512|emb|CEF97757.1| (Protein-tyrosine phosphatase, active site [Ostreococcus tauri]) HSP 1 Score: 152.525 bits (384), Expect = 7.084e-40 Identity = 93/254 (36.61%), Postives = 136/254 (53.54%), Query Frame = 0
Query: 18 AVAEDGADKEQVREKQKETATEGCSDTMSTTMLPQSVA------SVLQKITKWKDYANYGNPVGESRVIPMKTPLT---LELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNP--EHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
AVAED ++ + E A EG + T +P++ A SVL+K+ KW DY + G+ V +++IPMKTPL+ +E + AH T+ ++EQ LGR IGL+VDL+NH+CLYEED+ VS H VAK +P CR + + +L+ + + YVA+HC+YG+NRTG++ +LVE L + +AL FA+ARPPG+KH+HF E + RY
Sbjct: 41 AVAED--ERPVMPRVSDERAREGVE---AGTSMPETGAVDAEAPSVLKKLQKWGDYESCGDVVRGTKLIPMKTPLSARYVEDRCAH--------------------------------ALTMDILLREQRALGREIGLIVDLTNHDCLYEEDVP---ASVSRTHVRNVAKTVPSVGDCRRASKVVNDFLSSDAGKDRYVAVHCAYGFNRTGFMICCHLVETLGVSPEEALELFAEARPPGLKHQHFRCELIERY 254
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|1199294600|gb|OUS49681.1| (mRNA capping enzyme, guanylyltransferase subunit [Ostreococcus tauri]) HSP 1 Score: 152.525 bits (384), Expect = 7.985e-40 Identity = 89/249 (35.74%), Postives = 131/249 (52.61%), Query Frame = 0
Query: 18 AVAEDGAD-KEQVREKQKETATEGCSDTMSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLT---LELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNP--EHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
AVAED +V +++ E + T + SVL+K+ KW DY + G+ V +++IPMKTPL+ +E + AH T+ ++EQ LGR IGL+VDL+NH+CLYEED+ VS H VAK +P CR + + +L+ + + YVA+HC+YG+NRTG++ +LVE L + +AL FA+ARPPG+KH+HF E + RY
Sbjct: 41 AVAEDERPVMPRVSDERAREGVEAGTSMPETGTVDAEAPSVLKKLQKWGDYESCGDVVRGTKLIPMKTPLSARYVEDRCAH--------------------------------ALTMDILLREQRALGREIGLIVDLTNHDCLYEEDVP---ASVSRTHVRNVAKTVPSVGDCRRASKVVNDFLSSDAGKDRYVAVHCAYGFNRTGFMICCHLVETLGVSPEEALELFAEARPPGLKHQHFRCELIERY 254
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|302845489|ref|XP_002954283.1| (hypothetical protein VOLCADRAFT_118653 [Volvox carteri f. nagariensis] >gi|300260488|gb|EFJ44707.1| hypothetical protein VOLCADRAFT_118653, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 155.606 bits (392), Expect = 5.582e-38 Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 0
Query: 50 LPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
+P SV +VL K+ KW DY + G V ++ IPMKTPL+ E+ S + S+P+ T+ + V +QA LGR +GL++DLSNH+CLY +D+ P ++Y H VAK +P V + +P+ Y+A+HC+YG+NRTG++ YL+E AL+AFA++RPPG+KHE F +E RY
Sbjct: 67 IPASVPTVLTKLQKWGDYESVGRQVLPTKFIPMKTPLS---------------------AEILNSWSLPSQPKHRL---TVPEMVAQQAALGRKVGLLLDLSNHDCLYTDDIP---PWLTYRHIQLVAKELPPPEFVDTVVAVANKFWEKHPDEYIAVHCAYGFNRTGFVVCCYLIECCGLNVEAALSAFAESRPPGVKHEQFRNELHRRY 250
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|552816014|ref|XP_005844578.1| (hypothetical protein CHLNCDRAFT_58853 [Chlorella variabilis] >gi|307104221|gb|EFN52476.1| hypothetical protein CHLNCDRAFT_58853 [Chlorella variabilis]) HSP 1 Score: 150.984 bits (380), Expect = 1.387e-36 Identity = 74/205 (36.10%), Postives = 109/205 (53.17%), Query Frame = 0
Query: 56 SVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
SVL K+ KW +Y G PV + IPMKTP++ E+ + S EA T+ + +Q GR +GLV+DL+NH+CLY +D+ + YEH +AK +P R +V R + +PE ++AIHC+YG+NRTG++ +YL + + AL +FA ARPPG+KH+ F+ E ARY
Sbjct: 52 SVLNKLQKWANYEATGRPVWPTHFIPMKTPMSREIL------------------------DNWSLAEAPKHALTVPLLLAQQEAAGRDVGLVIDLANHDCLYSDDMLDS---LEYEHVQLIAKVLPSREAINEVERIAKSFWREHPEKFIAIHCAYGFNRTGFVVCSYLCQACGLSVDQALESFAAARPPGVKHDKFIRELYARY 229
BLAST of EWM23705.1 vs. NCBI_GenBank
Match: gi|633913047|gb|KDD76743.1| (hypothetical protein H632_c121p1 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 143.665 bits (361), Expect = 4.241e-35 Identity = 73/205 (35.61%), Postives = 109/205 (53.17%), Query Frame = 0
Query: 56 SVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARY 260
+VL K+ KW Y + G PV +R +PMKTP++ E+ S PE +++ + E GR +GL++DL+NH+CLY +DL D V++ AK +P ++ V R A PE +VAIHC+YG+NRTG++ +YL +E + +AL +FA ARPPG+KHE F++E RY
Sbjct: 38 TVLSKLQKWGSYPSLGLPVYPTRFLPMKTPMSEEILSNW------------------------SLPEPPQHTLSVRSLLAETRQAGRPLGLIIDLANHDCLYADDLPAD---VAHSQVALEAKVLPTQSAVDQVARLAQACWAERPEGHVAIHCAYGFNRTGFVVCSYLCQEEGLSVDEALQSFAAARPPGVKHEKFVAELYRRY 215 The following BLAST results are available for this feature:
BLAST of EWM23705.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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