EWM23706.1, cds6979 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23706.1 vs. NCBI_GenBank
Match: gi|585104860|gb|EWM23706.1| (aaa family cdc48 subfamily [Nannochloropsis gaditana]) HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query: 1 MPSGSKKQQIRYQQQYQDVVMAEQLDDIVLRRGPASTPALPDRLVLSSLDSRRLRVKAGDWLLISGSQPEKESRVNQENEDCPRRDSGGLRLMLRAWPGSNVPQGTAVGGGPLLSGQFFGKRRQGEDVNVSVRALPAMAKWLAASKVVLRVVPEGDGRESTGGGARETSRRDTPSQSSVAPVLFWKARLHSVLVGQLVFPGLRLAFASLGQGVSFEVVEVRAARGEMAGGAESMPDLATLTLKEVTAPQEPRVGLDLESVCEVLPGTRVAVAGLFPHGKAETATGWRGEPSGAKWGERLVEGGWWASVGGLEAVVEELRQGVEQSLDSLHVFLDRGLRPARGFLLVGPSGTGKTTLLR 358
MPSGSKKQQIRYQQQYQDVVMAEQLDDIVLRRGPASTPALPDRLVLSSLDSRRLRVKAGDWLLISGSQPEKESRVNQENEDCPRRDSGGLRLMLRAWPGSNVPQGTAVGGGPLLSGQFFGKRRQGEDVNVSVRALPAMAKWLAASKVVLRVVPEGDGRESTGGGARETSRRDTPSQSSVAPVLFWKARLHSVLVGQLVFPGLRLAFASLGQGVSFEVVEVRAARGEMAGGAESMPDLATLTLKEVTAPQEPRVGLDLESVCEVLPGTRVAVAGLFPHGKAETATGWRGEPSGAKWGERLVEGGWWASVGGLEAVVEELRQGVEQSLDSLHVFLDRGLRPARGFLLVGPSGTGKTTLLR
Sbjct: 1 MPSGSKKQQIRYQQQYQDVVMAEQLDDIVLRRGPASTPALPDRLVLSSLDSRRLRVKAGDWLLISGSQPEKESRVNQENEDCPRRDSGGLRLMLRAWPGSNVPQGTAVGGGPLLSGQFFGKRRQGEDVNVSVRALPAMAKWLAASKVVLRVVPEGDGRESTGGGARETSRRDTPSQSSVAPVLFWKARLHSVLVGQLVFPGLRLAFASLGQGVSFEVVEVRAARGEMAGGAESMPDLATLTLKEVTAPQEPRVGLDLESVCEVLPGTRVAVAGLFPHGKAETATGWRGEPSGAKWGERLVEGGWWASVGGLEAVVEELRQGVEQSLDSLHVFLDRGLRPARGFLLVGPSGTGKTTLLR 358
BLAST of EWM23706.1 vs. NCBI_GenBank
Match: gi|294654757|ref|XP_456823.2| (DEHA2A11286p [Debaryomyces hansenii CBS767] >gi|199429126|emb|CAG84798.2| DEHA2A11286p [Debaryomyces hansenii CBS767]) HSP 1 Score: 63.5438 bits (153), Expect = 2.602e-7 Identity = 53/175 (30.29%), Postives = 80/175 (45.71%), Query Frame = 0
Query: 197 LVFPGLRLAFASLGQG------------VSFEVVEVRAARGEMAGGAESMPD-LATLTLKEVTAPQEPRVGLDLESVCEVLPGTRVAVAGLFPHGKAETATGWRGEPSGAKWGERLVEGGWWASVGGLEAVVEELRQGVEQSLDSLHVFLDRGLRPARGFLLVGPSGTGKTTLLR 358
+VFPGL+L S+ + +V++V G ES+ D L L++ E E E+ + V+ A +F GK + T EP +K+ + L + ++ VGGL + L+ +E L + +F D G+ P RG LL GP GTGKT LLR
Sbjct: 159 IVFPGLKLTKVSIPNNEGGNEEEDIKMSCTIKVIDV--------SGKESLEDSLNKLSINE-------------EKESEICNSSTVSPAYIFSKGKTQINTSVIREPLRSKFPQ-LPQPVGYSQVGGLSRPIALLQSTIELPLHNPTLFSDFGISPPRGILLHGPPGTGKTMLLR 311 The following BLAST results are available for this feature:
BLAST of EWM23706.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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