EWM23678.1, cds6965 (CDS) Nannochloropsis gaditana

Overview
NameEWM23678.1
Unique Namecds6965
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:168896..169876 +

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Properties
Property NameValue
Protein idEWM23678.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100030g3.4175.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:168896..169876 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
[Close]
BLAST of EWM23678.1 vs. NCBI_GenBank
Match: gi|585104832|gb|EWM23678.1| (hypothetical protein Naga_100030g3 [Nannochloropsis gaditana])

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 
Query:    1 MPPATNQVSSPRRSREPLWSFIAAHAILCINPARAFLTPTSAIGSLPCSTSSPSPFVSQARPFPAGKLWSQCPPTSRTSPTNNAIEIRQPLLLPAAAHSRDSFLRFLPRPPPSLSPPPSPASHHIRRMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTGLPPPPLPPLPSRQGPLRPAGLASAALHLQFARGRDSPAPGPRGAFAGRGRSRGPGPGPLLGLPARRQRLPPGRASLRTSGLPRRGQGEGVGG 326
            MPPATNQVSSPRRSREPLWSFIAAHAILCINPARAFLTPTSAIGSLPCSTSSPSPFVSQARPFPAGKLWSQCPPTSRTSPTNNAIEIRQPLLLPAAAHSRDSFLRFLPRPPPSLSPPPSPASHHIRRMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTGLPPPPLPPLPSRQGPLRPAGLASAALHLQFARGRDSPAPGPRGAFAGRGRSRGPGPGPLLGLPARRQRLPPGRASLRTSGLPRRGQGEGVGG
Sbjct:    1 MPPATNQVSSPRRSREPLWSFIAAHAILCINPARAFLTPTSAIGSLPCSTSSPSPFVSQARPFPAGKLWSQCPPTSRTSPTNNAIEIRQPLLLPAAAHSRDSFLRFLPRPPPSLSPPPSPASHHIRRMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTGLPPPPLPPLPSRQGPLRPAGLASAALHLQFARGRDSPAPGPRGAFAGRGRSRGPGPGPLLGLPARRQRLPPGRASLRTSGLPRRGQGEGVGG 326
[Close]
BLAST of EWM23678.1 vs. NCBI_GenBank
Match: gi|553182832|ref|XP_005853791.1| (hypothetical protein NGA_2112100, partial [Nannochloropsis gaditana CCMP526] >gi|422295272|gb|EKU22571.1| hypothetical protein NGA_2112100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 187.578 bits (475), Expect = 6.293e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 
Query:  127 RMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTG 234
            RMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTG
Sbjct:    1 RMSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPDDHEVLLLVEGEEGVYRGKRGKEAREGGGEGGAAGLLGMVELSLQPTTG 108
The following BLAST results are available for this feature:
BLAST of EWM23678.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104832|gb|EWM23678.1|0.000e+0100.00hypothetical protein Naga_100030g3 [Nannochloropsi... [more]
gi|553182832|ref|XP_005853791.1|6.293e-55100.00hypothetical protein NGA_2112100, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6981rna6981Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications