EWM23712.1, cds6961 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|585104867|gb|EWM23712.1| (putative transporter [Nannochloropsis gaditana]) HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query: 1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM 262
MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM
Sbjct: 1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM 262
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|923139071|ref|XP_013763000.1| (major facilitator superfamily transporter [Thecamonas trahens ATCC 50062] >gi|906552777|gb|KNC46020.1| major facilitator superfamily transporter [Thecamonas trahens ATCC 50062]) HSP 1 Score: 180.259 bits (456), Expect = 1.914e-50 Identity = 98/240 (40.83%), Postives = 140/240 (58.33%), Query Frame = 0
Query: 2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQ-AGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERL 240
AGL+A+ AER+G++ PF+ + PL +G + + WPENYGDA+V + S + ++ LGL Q+ FEG MY FVF+W+PAL A D PY G IF+ FMVC M GS IF L+ L VP+++H+ A A T Y + VY AFL FE+ GMF+PSYG+++SM++PE RS VMN R+PLNA ++ LL ++ + + + +C + Y F L
Sbjct: 186 AGLLASGLAERFGFVAPFLAAVVPLVALGAIVAVTWPENYGDASVNVGQGMANGLSTLLTTPKVLCLGLAQALFEGGMYVFVFMWSPALATAETRDTLPY-GFIFAVFMVCVMVGSAIFG-LVAGFSLKAVPIVLHVAAASAMATVAYCNASKAVVYGAFLTFEVACGMFFPSYGTLRSMHVPEAARSAVMNFTRVPLNAFVIALLYAVKFVDLEVTSVFWICACAQACAGVFYLVFVAL 423
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1160574857|ref|XP_020427657.1| (hypothetical protein PPL_11027 [Polysphondylium pallidum PN500] >gi|281201311|gb|EFA75523.1| hypothetical protein PPL_11027 [Polysphondylium pallidum PN500]) HSP 1 Score: 167.933 bits (424), Expect = 9.330e-46 Identity = 86/235 (36.60%), Postives = 143/235 (60.85%), Query Frame = 0
Query: 2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPY-LGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTA--FYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIM 233
AGL ++F A+R+G++ PF++ L L + +L W ENYG+++V ++ Y+ N+ +II LG QS FE +MY FVF+WTP LQ G VG G+IF+TFMVC M GS+IF+++ K+ +T + + + + F Q+ +Y++FL+FE+ G+++P+ G+++S IPE R+ +MN FR+PLN ++V++L + IS +CTL + L++
Sbjct: 173 AGLWSSFAADRWGFVSPFMWALGLLVICTVLIITSWNENYGNSSVSLEHTFRSSFQYLMNDRSIIKLGFIQSLFEASMYTFVFMWTPTLQESGSQVGELPFGLIFATFMVCIMIGSSIFNMISKQASMTTERLACWIFGCAIGCMSIPYLFPTQSLLIYISFLVFEICCGLYFPTIGTLRSKYIPESARTSIMNYFRVPLNFMVVVVLS--NISSISTTNIFLVCTLWLSIALVL 405
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|923120567|ref|XP_013753755.1| (major facilitator superfamily transporter [Thecamonas trahens ATCC 50062] >gi|906561047|gb|KNC54290.1| major facilitator superfamily transporter [Thecamonas trahens ATCC 50062]) HSP 1 Score: 167.548 bits (423), Expect = 2.608e-45 Identity = 95/242 (39.26%), Postives = 142/242 (58.68%), Query Frame = 0
Query: 13 YGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQA-GGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFER-----LRKRTPDVH 248
+GY+ PFV L PL ++ + + W ENYGDA + + +L +A + ++ LGL Q+ FEG MY FVF+W+PAL DV PY G+IF+ +MVC M GS +F+++ L +P+++H A + L+ F VY+AF FE+ GMF+P+YG+++S +IPE RS +MN+FRIPLNA ++I+ LI+VK + + T +C L H L Y F R R + H
Sbjct: 230 FGYVAPFVLALVPLAVLAGIVSRTWNENYGDATIEVSESLRRAVGVLAAAPHLVCLGLAQALFEGGMYTFVFMWSPALATEETRDVLPY-GVIFAVYMVCIMIGSALFNVVDASTL--PLPLLLHGAAIGSMLSVPAFFDAKPLVYLAFCGFEVACGMFFPTYGTLRSAHIPEATRSTMMNLFRIPLNAFVLIV--LIKVKHMPVTTVFWICALAHLGALACYIVFASRATVYARARHAEKH 466
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|198417576|ref|XP_002129829.1| (PREDICTED: molybdate-anion transporter [Ciona intestinalis]) HSP 1 Score: 164.466 bits (415), Expect = 2.298e-44 Identity = 90/225 (40.00%), Postives = 133/225 (59.11%), Query Frame = 0
Query: 2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLI 226
AG +A FA+RYGY+ PF + L ++ + W ENYGD+ ++ KA I+ + ++ LGL QS FEGAMY FV WTPAL D G+IF++FMV M GS++F +L K + V LIA ++ T+ V++AF +FE+ VG+F+PS G+++ +PE+VRS VMN FRIPLN I+++L LI+ +I + T +C L+
Sbjct: 180 AGHIAQTFADRYGYVAPFDLSIVTLVMMIVAIMYTWNENYGDSQSTITVSFGKAAEAIKQDPKVLMLGLVQSLFEGAMYTFVLEWTPALSNPNSDKSIPHGLIFASFMVAVMIGSSVFKLLTKVRTIESFMRFVLLIAAMSLAVPVVLPDHTNVVFMAFCVFEMCVGIFWPSLGTMRGSYVPEQVRSTVMNFFRIPLNLIVIVL--LIQNLKIKVVFTCCVCFLL 402
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|676495686|ref|XP_009066968.1| (hypothetical protein LOTGIDRAFT_134790 [Lottia gigantea] >gi|556093650|gb|ESO82303.1| hypothetical protein LOTGIDRAFT_134790 [Lottia gigantea]) HSP 1 Score: 157.147 bits (396), Expect = 1.276e-41 Identity = 86/227 (37.89%), Postives = 137/227 (60.35%), Query Frame = 0
Query: 2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGED----VGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCT 224
AGLVA +FA+ +G++ PF + LT++ I+ + WP+NYGD + + KA S I+ + ++ LGL Q+ FEG+MY FV WTPAL ED P+ G IF+ FMV M GS++F +L K + +V I++LA LT F + +++ F++FE VG+F+PS G+++ +PEE R+ +MN FR+PLN I+V++L ++ +++ CT
Sbjct: 180 AGLVAQYFADIFGFVAPFDLSMGVLTIMVIITLMTWPDNYGDKSSNIRESFHKAISTIKTDQKVLCLGLIQAMFEGSMYIFVLEWTPALTPMTEDGHRGAIPH-GHIFAAFMVAIMIGSSMFKLLSKFTSVESFMRVVLFISSLALLTPILFHGNQTVIFIGFIVFETCVGIFWPSIGTLRGKYVPEETRATIMNCFRVPLNLIVVVIL----LQDLTINVVFGCCT 401
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1005489665|ref|XP_015747549.1| (PREDICTED: molybdate-anion transporter-like [Acropora digitifera]) HSP 1 Score: 157.147 bits (396), Expect = 1.932e-41 Identity = 91/265 (34.34%), Postives = 141/265 (53.21%), Query Frame = 0
Query: 2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGE------DVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDD 260
AGL+A A +G++ PF L L + WWPENYGD +L + I+N+S + LGL QS FEG+MY FV WTPAL + D G IF++FM M GS F L K + + + V IATL+ + + ++ + ++V FL+FE VGMF+P+ G ++ +PE R+ +MNIFR+PLN I+++LL V+ +S+ C + V +M RL +T ++ ++ KG+ ++
Sbjct: 181 AGLLAQTVASHFGFVAPFSLALLLLITGSAIICCWWPENYGDVGGNVKFSLVQGLGAIKNDSKVFCLGLIQSLFEGSMYTFVLEWTPALTPRSDLKRETVDEKIPHGWIFASFMFSVMLGSYAFKCLNKLDSVESLLRYVFGIATLSMIPPIFMPEKRAVIFVGFLVFEFCVGMFWPAMGFLRGKYVPESTRATIMNIFRVPLNFIVILLL----VQDLSLSMVFTCCFVFLSVCCVMEHYLFRLSFKTVEISLITQKGENNANE 441
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|330795256|ref|XP_003285690.1| (hypothetical protein DICPUDRAFT_7152 [Dictyostelium purpureum] >gi|325084321|gb|EGC37751.1| hypothetical protein DICPUDRAFT_7152, partial [Dictyostelium purpureum]) HSP 1 Score: 152.91 bits (385), Expect = 1.810e-40 Identity = 83/217 (38.25%), Postives = 131/217 (60.37%), Query Frame = 0
Query: 1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGE--DVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQIS 215
++GL A+ A R+GY+ PF+F L L + IL W ENYGD+ A+ I N+ I LGL QS FE +MY+FVF+WTP L + D G+IF+TFMVC M GS+ F++L K + T++ ++ + +T + + K + VY++FL+FE+ G+++P G+++S IPE +R+ MN+FR+PLN ++V+ L ++IS
Sbjct: 147 LSGLWASECASRWGYVSPFLFALGLLIICSILIATQWNENYGDSKSSLVATFKTAFHSITNDPVICSLGLTQSLFEASMYSFVFLWTPTLTESPQLKDFKLPFGLIFATFMVCVMIGSSFFTLLSKTSPETLIQYILIISSTCFIIPCLF--KNSILVYLSFLVFEICCGLYFPCLGTLRSKYIPETIRATTMNLFRVPLNLLVVV--SLTNTEKIS 359
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1207959861|ref|XP_021370262.1| (molybdate-anion transporter-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 154.066 bits (388), Expect = 2.851e-40 Identity = 96/275 (34.91%), Postives = 139/275 (50.55%), Query Frame = 0
Query: 1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVG---------------PYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDD 260
+AGLVA FFA+R+G++ PF L LT++ ++ W ENYGD N +++ A I+ + I+ LGL QS FEG+MY FV WTPAL D P+ G IF+ FMV M GS++F IL + V LIA L+ T F V+ FL+FE VG+F+PS G ++ +PE R+ +MN FRIPLN I+V++L ++ + M C + + +I L ++ P + QE D
Sbjct: 180 VAGLVAQFFADRFGFVAPFDVSLTVLTIMTVIIVFTWSENYGDRNSDLSVSFSNASKSIRTDHKILCLGLIQSLFEGSMYIFVLEWTPALTPETHDTATSTARHLLSSNETTIPH-GHIFAGFMVSIMIGSSLFKILSSYTNVESFMRFVLLIAALSLSTPIIFKGNQLFVFCGFLVFETCVGIFWPSLGQMRGKYVPEATRATIMNFFRIPLNFIVVVIL----LQALPMKMIFECCVMFLFLAMICQQWLYSLYRKLPKSESLEKGSQEFSDS 449
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|734547084|gb|KHN75465.1| (Major facilitator superfamily domain-containing protein 5 [Toxocara canis]) HSP 1 Score: 154.066 bits (388), Expect = 6.058e-40 Identity = 86/227 (37.89%), Postives = 134/227 (59.03%), Query Frame = 0
Query: 1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQ--AGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTL 225
++G+VA + A+ +GY+ PF L LT++ ++ WPENYGD A ++N+ +I LGL QS FEG+MY FV WTPAL + GE + P+ G IF++FMV M GS++F +L + + +V L++++ F S +Y AFL+FEL VGMF+P+ G ++ + +PE+ RS +MN R+PLNAI++ +L ++ +SM C L
Sbjct: 177 ISGVVAQYAADLFGYVAPFDVSLCVLTVMSVVLVFTWPENYGDQKAAVWQHFVDAVDSMKNDGKVICLGLIQSLFEGSMYVFVLEWTPALTHASNGEPI-PH-GYIFASFMVAIMMGSSMFKMLTRYHRPESFMRVVLLVSSVCLAAPILFADYVSVIYAAFLVFELCVGMFWPAMGFMRGIYVPEQTRSTIMNFCRVPLNAIVITIL----LQNLSMRLIFHFCVL 397 The following BLAST results are available for this feature:
BLAST of EWM23712.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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