EWM23712.1, cds6961 (CDS) Nannochloropsis gaditana

Overview
NameEWM23712.1
Unique Namecds6961
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:161864..161912 +
Alignment locationCM002470.1:162115..162630 +
Alignment locationCM002470.1:162843..163066 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23712.1
Productputative transporter
Orig transcript idgnl|cribi|Naga_101220g2.5685.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:161864..161912 +
CM002470.1supercontigCM002470.1:162115..162630 +
CM002470.1supercontigCM002470.1:162843..163066 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015098molybdate ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0015689molybdate ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR008509MOT2
Homology
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|585104867|gb|EWM23712.1| (putative transporter [Nannochloropsis gaditana])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query:    1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM 262
            MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM
Sbjct:    1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDDAM 262          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|923139071|ref|XP_013763000.1| (major facilitator superfamily transporter [Thecamonas trahens ATCC 50062] >gi|906552777|gb|KNC46020.1| major facilitator superfamily transporter [Thecamonas trahens ATCC 50062])

HSP 1 Score: 180.259 bits (456), Expect = 1.914e-50
Identity = 98/240 (40.83%), Postives = 140/240 (58.33%), Query Frame = 0
Query:    2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQ-AGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERL 240
            AGL+A+  AER+G++ PF+  + PL  +G +  + WPENYGDA+V     +    S +     ++ LGL Q+ FEG MY FVF+W+PAL  A   D  PY G IF+ FMVC M GS IF  L+    L  VP+++H+ A  A  T  Y     + VY AFL FE+  GMF+PSYG+++SM++PE  RS VMN  R+PLNA ++ LL  ++   + + +   +C        + Y  F  L
Sbjct:  186 AGLLASGLAERFGFVAPFLAAVVPLVALGAIVAVTWPENYGDASVNVGQGMANGLSTLLTTPKVLCLGLAQALFEGGMYVFVFMWSPALATAETRDTLPY-GFIFAVFMVCVMVGSAIFG-LVAGFSLKAVPIVLHVAAASAMATVAYCNASKAVVYGAFLTFEVACGMFFPSYGTLRSMHVPEAARSAVMNFTRVPLNAFVIALLYAVKFVDLEVTSVFWICACAQACAGVFYLVFVAL 423          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1160574857|ref|XP_020427657.1| (hypothetical protein PPL_11027 [Polysphondylium pallidum PN500] >gi|281201311|gb|EFA75523.1| hypothetical protein PPL_11027 [Polysphondylium pallidum PN500])

HSP 1 Score: 167.933 bits (424), Expect = 9.330e-46
Identity = 86/235 (36.60%), Postives = 143/235 (60.85%), Query Frame = 0
Query:    2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPY-LGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTA--FYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIM 233
            AGL ++F A+R+G++ PF++ L  L +  +L    W ENYG+++V        ++ Y+ N+ +II LG  QS FE +MY FVF+WTP LQ  G  VG    G+IF+TFMVC M GS+IF+++ K+  +T   +   +        +  + F  Q+  +Y++FL+FE+  G+++P+ G+++S  IPE  R+ +MN FR+PLN ++V++L    +  IS      +CTL   + L++
Sbjct:  173 AGLWSSFAADRWGFVSPFMWALGLLVICTVLIITSWNENYGNSSVSLEHTFRSSFQYLMNDRSIIKLGFIQSLFEASMYTFVFMWTPTLQESGSQVGELPFGLIFATFMVCIMIGSSIFNMISKQASMTTERLACWIFGCAIGCMSIPYLFPTQSLLIYISFLVFEICCGLYFPTIGTLRSKYIPESARTSIMNYFRVPLNFMVVVVLS--NISSISTTNIFLVCTLWLSIALVL 405          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|923120567|ref|XP_013753755.1| (major facilitator superfamily transporter [Thecamonas trahens ATCC 50062] >gi|906561047|gb|KNC54290.1| major facilitator superfamily transporter [Thecamonas trahens ATCC 50062])

HSP 1 Score: 167.548 bits (423), Expect = 2.608e-45
Identity = 95/242 (39.26%), Postives = 142/242 (58.68%), Query Frame = 0
Query:   13 YGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQA-GGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFER-----LRKRTPDVH 248
            +GY+ PFV  L PL ++  + +  W ENYGDA +  + +L +A   +     ++ LGL Q+ FEG MY FVF+W+PAL      DV PY G+IF+ +MVC M GS +F+++    L   +P+++H  A  + L+   F      VY+AF  FE+  GMF+P+YG+++S +IPE  RS +MN+FRIPLNA ++I+  LI+VK + + T   +C L H   L  Y  F        R R  + H
Sbjct:  230 FGYVAPFVLALVPLAVLAGIVSRTWNENYGDATIEVSESLRRAVGVLAAAPHLVCLGLAQALFEGGMYTFVFMWSPALATEETRDVLPY-GVIFAVYMVCIMIGSALFNVVDASTL--PLPLLLHGAAIGSMLSVPAFFDAKPLVYLAFCGFEVACGMFFPTYGTLRSAHIPEATRSTMMNLFRIPLNAFVLIV--LIKVKHMPVTTVFWICALAHLGALACYIVFASRATVYARARHAEKH 466          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|198417576|ref|XP_002129829.1| (PREDICTED: molybdate-anion transporter [Ciona intestinalis])

HSP 1 Score: 164.466 bits (415), Expect = 2.298e-44
Identity = 90/225 (40.00%), Postives = 133/225 (59.11%), Query Frame = 0
Query:    2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLI 226
            AG +A  FA+RYGY+ PF   +  L ++ +     W ENYGD+     ++  KA   I+ +  ++ LGL QS FEGAMY FV  WTPAL     D     G+IF++FMV  M GS++F +L K   +      V LIA ++          T+ V++AF +FE+ VG+F+PS G+++   +PE+VRS VMN FRIPLN I+++L  LI+  +I +  T  +C L+
Sbjct:  180 AGHIAQTFADRYGYVAPFDLSIVTLVMMIVAIMYTWNENYGDSQSTITVSFGKAAEAIKQDPKVLMLGLVQSLFEGAMYTFVLEWTPALSNPNSDKSIPHGLIFASFMVAVMIGSSVFKLLTKVRTIESFMRFVLLIAAMSLAVPVVLPDHTNVVFMAFCVFEMCVGIFWPSLGTMRGSYVPEQVRSTVMNFFRIPLNLIVIVL--LIQNLKIKVVFTCCVCFLL 402          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|676495686|ref|XP_009066968.1| (hypothetical protein LOTGIDRAFT_134790 [Lottia gigantea] >gi|556093650|gb|ESO82303.1| hypothetical protein LOTGIDRAFT_134790 [Lottia gigantea])

HSP 1 Score: 157.147 bits (396), Expect = 1.276e-41
Identity = 86/227 (37.89%), Postives = 137/227 (60.35%), Query Frame = 0
Query:    2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGED----VGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCT 224
            AGLVA +FA+ +G++ PF   +  LT++ I+  + WP+NYGD +     +  KA S I+ +  ++ LGL Q+ FEG+MY FV  WTPAL    ED      P+ G IF+ FMV  M GS++F +L K   +     +V  I++LA LT   F    + +++ F++FE  VG+F+PS G+++   +PEE R+ +MN FR+PLN I+V++L    ++ +++      CT
Sbjct:  180 AGLVAQYFADIFGFVAPFDLSMGVLTIMVIITLMTWPDNYGDKSSNIRESFHKAISTIKTDQKVLCLGLIQAMFEGSMYIFVLEWTPALTPMTEDGHRGAIPH-GHIFAAFMVAIMIGSSMFKLLSKFTSVESFMRVVLFISSLALLTPILFHGNQTVIFIGFIVFETCVGIFWPSIGTLRGKYVPEETRATIMNCFRVPLNLIVVVIL----LQDLTINVVFGCCT 401          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1005489665|ref|XP_015747549.1| (PREDICTED: molybdate-anion transporter-like [Acropora digitifera])

HSP 1 Score: 157.147 bits (396), Expect = 1.932e-41
Identity = 91/265 (34.34%), Postives = 141/265 (53.21%), Query Frame = 0
Query:    2 AGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGE------DVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDD 260
            AGL+A   A  +G++ PF   L  L     +   WWPENYGD       +L +    I+N+S +  LGL QS FEG+MY FV  WTPAL    +      D     G IF++FM   M GS  F  L K + +  +   V  IATL+ +   +  ++ + ++V FL+FE  VGMF+P+ G ++   +PE  R+ +MNIFR+PLN I+++LL    V+ +S+      C +   V  +M     RL  +T ++  ++ KG+   ++
Sbjct:  181 AGLLAQTVASHFGFVAPFSLALLLLITGSAIICCWWPENYGDVGGNVKFSLVQGLGAIKNDSKVFCLGLIQSLFEGSMYTFVLEWTPALTPRSDLKRETVDEKIPHGWIFASFMFSVMLGSYAFKCLNKLDSVESLLRYVFGIATLSMIPPIFMPEKRAVIFVGFLVFEFCVGMFWPAMGFLRGKYVPESTRATIMNIFRVPLNFIVILLL----VQDLSLSMVFTCCFVFLSVCCVMEHYLFRLSFKTVEISLITQKGENNANE 441          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|330795256|ref|XP_003285690.1| (hypothetical protein DICPUDRAFT_7152 [Dictyostelium purpureum] >gi|325084321|gb|EGC37751.1| hypothetical protein DICPUDRAFT_7152, partial [Dictyostelium purpureum])

HSP 1 Score: 152.91 bits (385), Expect = 1.810e-40
Identity = 83/217 (38.25%), Postives = 131/217 (60.37%), Query Frame = 0
Query:    1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGE--DVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQIS 215
            ++GL A+  A R+GY+ PF+F L  L +  IL    W ENYGD+          A+  I N+  I  LGL QS FE +MY+FVF+WTP L    +  D     G+IF+TFMVC M GS+ F++L K +  T++  ++ + +T   +   +  K +  VY++FL+FE+  G+++P  G+++S  IPE +R+  MN+FR+PLN ++V+   L   ++IS
Sbjct:  147 LSGLWASECASRWGYVSPFLFALGLLIICSILIATQWNENYGDSKSSLVATFKTAFHSITNDPVICSLGLTQSLFEASMYSFVFLWTPTLTESPQLKDFKLPFGLIFATFMVCVMIGSSFFTLLSKTSPETLIQYILIISSTCFIIPCLF--KNSILVYLSFLVFEICCGLYFPCLGTLRSKYIPETIRATTMNLFRVPLNLLVVV--SLTNTEKIS 359          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|1207959861|ref|XP_021370262.1| (molybdate-anion transporter-like isoform X1 [Mizuhopecten yessoensis])

HSP 1 Score: 154.066 bits (388), Expect = 2.851e-40
Identity = 96/275 (34.91%), Postives = 139/275 (50.55%), Query Frame = 0
Query:    1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQAGGEDVG---------------PYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTLIHGVGLIMYWNFERLRKRTPDVHYVSVKGQEVLDD 260
            +AGLVA FFA+R+G++ PF   L  LT++ ++    W ENYGD N   +++   A   I+ +  I+ LGL QS FEG+MY FV  WTPAL     D                 P+ G IF+ FMV  M GS++F IL     +      V LIA L+  T   F      V+  FL+FE  VG+F+PS G ++   +PE  R+ +MN FRIPLN I+V++L    ++ + M      C +   + +I       L ++ P    +    QE  D 
Sbjct:  180 VAGLVAQFFADRFGFVAPFDVSLTVLTIMTVIIVFTWSENYGDRNSDLSVSFSNASKSIRTDHKILCLGLIQSLFEGSMYIFVLEWTPALTPETHDTATSTARHLLSSNETTIPH-GHIFAGFMVSIMIGSSLFKILSSYTNVESFMRFVLLIAALSLSTPIIFKGNQLFVFCGFLVFETCVGIFWPSLGQMRGKYVPEATRATIMNFFRIPLNFIVVVIL----LQALPMKMIFECCVMFLFLAMICQQWLYSLYRKLPKSESLEKGSQEFSDS 449          
BLAST of EWM23712.1 vs. NCBI_GenBank
Match: gi|734547084|gb|KHN75465.1| (Major facilitator superfamily domain-containing protein 5 [Toxocara canis])

HSP 1 Score: 154.066 bits (388), Expect = 6.058e-40
Identity = 86/227 (37.89%), Postives = 134/227 (59.03%), Query Frame = 0
Query:    1 MAGLVANFFAERYGYIGPFVFCLFPLTLVGILATLWWPENYGDANVRPAMALPKAWSYIQNNSAIIYLGLGQSCFEGAMYAFVFVWTPALQ--AGGEDVGPYLGIIFSTFMVCTMTGSNIFSILIKKNLLTVVPVMVHLIATLANLTAFYFVKQTSSVYVAFLLFELTVGMFYPSYGSIKSMNIPEEVRSGVMNIFRIPLNAIMVILLGLIEVKQISMGTTLALCTL 225
            ++G+VA + A+ +GY+ PF   L  LT++ ++    WPENYGD           A   ++N+  +I LGL QS FEG+MY FV  WTPAL   + GE + P+ G IF++FMV  M GS++F +L + +       +V L++++       F    S +Y AFL+FEL VGMF+P+ G ++ + +PE+ RS +MN  R+PLNAI++ +L    ++ +SM      C L
Sbjct:  177 ISGVVAQYAADLFGYVAPFDVSLCVLTVMSVVLVFTWPENYGDQKAAVWQHFVDAVDSMKNDGKVICLGLIQSLFEGSMYVFVLEWTPALTHASNGEPI-PH-GYIFASFMVAIMMGSSMFKMLTRYHRPESFMRVVLLVSSVCLAAPILFADYVSVIYAAFLVFELCVGMFWPAMGFMRGIYVPEQTRSTIMNFCRVPLNAIVITIL----LQNLSMRLIFHFCVL 397          
The following BLAST results are available for this feature:
BLAST of EWM23712.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104867|gb|EWM23712.1|0.000e+0100.00putative transporter [Nannochloropsis gaditana][more]
gi|923139071|ref|XP_013763000.1|1.914e-5040.83major facilitator superfamily transporter [Thecamo... [more]
gi|1160574857|ref|XP_020427657.1|9.330e-4636.60hypothetical protein PPL_11027 [Polysphondylium pa... [more]
gi|923120567|ref|XP_013753755.1|2.608e-4539.26major facilitator superfamily transporter [Thecamo... [more]
gi|198417576|ref|XP_002129829.1|2.298e-4440.00PREDICTED: molybdate-anion transporter [Ciona inte... [more]
gi|676495686|ref|XP_009066968.1|1.276e-4137.89hypothetical protein LOTGIDRAFT_134790 [Lottia gig... [more]
gi|1005489665|ref|XP_015747549.1|1.932e-4134.34PREDICTED: molybdate-anion transporter-like [Acrop... [more]
gi|330795256|ref|XP_003285690.1|1.810e-4038.25hypothetical protein DICPUDRAFT_7152 [Dictyosteliu... [more]
gi|1207959861|ref|XP_021370262.1|2.851e-4034.91molybdate-anion transporter-like isoform X1 [Mizuh... [more]
gi|734547084|gb|KHN75465.1|6.058e-4037.89Major facilitator superfamily domain-containing pr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6977rna6977Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications