EWM23713.1, cds6960 (CDS) Nannochloropsis gaditana

Overview
NameEWM23713.1
Unique Namecds6960
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:160693..160807 +
Alignment locationCM002470.1:160996..161125 +
Alignment locationCM002470.1:161309..161414 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23713.1
ProductProtein of unknown function DUF791
Orig transcript idgnl|cribi|Naga_100647g2.2574.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:160693..160807 +
CM002470.1supercontigCM002470.1:160996..161125 +
CM002470.1supercontigCM002470.1:161309..161414 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015098molybdate ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0015689molybdate ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR008509MOT2
Homology
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|585104869|gb|EWM23713.1| (Protein of unknown function DUF791 [Nannochloropsis gaditana])

HSP 1 Score: 241.506 bits (615), Expect = 7.342e-81
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MYTHSLFWAIGACVTTRVLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYGGLFCRRPGRQLRKEEDVRRLRRVLYHLLSGQARE 116
            MYTHSLFWAIGACVTTRVLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYGGLFCRRPGRQLRKEEDVRRLRRVLYHLLSGQARE
Sbjct:    1 MYTHSLFWAIGACVTTRVLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYGGLFCRRPGRQLRKEEDVRRLRRVLYHLLSGQARE 116          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|675386791|gb|KFM79688.1| (hypothetical protein X975_13749, partial [Stegodyphus mimosarum])

HSP 1 Score: 64.6994 bits (156), Expect = 8.530e-10
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    6 LFWAIGACVTTRVLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            L   IG C        S+ + VV  T SN PS   N+I     F++FQR +  V  LA+F DW+QGPY Y LY+HYG
Sbjct:   29 LLITIGVC--------SALQYVVQTTKSNLPSA--NNIH----FRIFQRKYFVVYFLALFGDWLQGPYIYKLYSHYG 91          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|443687296|gb|ELT90330.1| (hypothetical protein CAPTEDRAFT_161785 [Capitella teleta])

HSP 1 Score: 61.6178 bits (148), Expect = 9.067e-9
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:   49 FKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            FK FQR++L V LLAM  DW+QGPY YALYAHYG
Sbjct:   34 FKAFQRTYLAVYLLAMAGDWLQGPYVYALYAHYG 67          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|1067061357|ref|XP_018017864.1| (PREDICTED: molybdate-anion transporter-like isoform X1 [Hyalella azteca])

HSP 1 Score: 58.5362 bits (140), Expect = 1.220e-7
Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 0
Query:   18 VLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            +L  ++SK    + S N P            FK FQ SF  V  +A+FSDW+QGPY Y LY+HYG
Sbjct:   20 ILQFTASKTQQQIASGNNPH-----------FKKFQYSFFLVYFMALFSDWLQGPYVYKLYSHYG 73          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|1067061359|ref|XP_018017872.1| (PREDICTED: molybdate-anion transporter-like isoform X2 [Hyalella azteca])

HSP 1 Score: 58.5362 bits (140), Expect = 1.281e-7
Identity = 28/65 (43.08%), Postives = 36/65 (55.38%), Query Frame = 0
Query:   18 VLLSSSSKQVVDLTSSNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            +L  ++SK    + S N P            FK FQ SF  V  +A+FSDW+QGPY Y LY+HYG
Sbjct:   20 ILQFTASKTQQQIASGNNPH-----------FKKFQYSFFLVYFMALFSDWLQGPYVYKLYSHYG 73          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|1022762147|gb|KZS08001.1| (Molybdate-anion transporter [Daphnia magna])

HSP 1 Score: 56.9954 bits (136), Expect = 4.520e-7
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   37 SKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            +K H   S   +FK FQR F    LLA+FSDW+QGPY Y LY+ YG
Sbjct:   26 TKSHMVASLNPEFKKFQRIFFAPYLLALFSDWLQGPYVYRLYSQYG 71          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|686635241|ref|XP_009310066.1| (hypothetical protein DQ04_02361000 [Trypanosoma grayi] >gi|657141583|gb|KEG11688.1| hypothetical protein DQ04_02361000 [Trypanosoma grayi])

HSP 1 Score: 56.6102 bits (135), Expect = 5.544e-7
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:   33 SNKPSKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            S+  +  H+  +    FK FQR FL V LLAM +DW+QGPY Y LY HYG
Sbjct:   29 SDAQTPLHSVATTTPSFKSFQRQFLLVYLLAMAADWMQGPYIYRLYTHYG 78          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|926619306|ref|XP_013774896.1| (PREDICTED: molybdate-anion transporter-like [Limulus polyphemus])

HSP 1 Score: 56.225 bits (134), Expect = 6.403e-7
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   37 SKEHNDISRRGDFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            +K H   +   DF  FQ+ +  V  LA+F DW+QGPY Y LY+HYG
Sbjct:   30 TKSHISSANNKDFLRFQKKYFMVYFLALFGDWLQGPYVYKLYSHYG 75          
BLAST of EWM23713.1 vs. NCBI_GenBank
Match: gi|546302371|ref|XP_005711678.1| (unnamed protein product [Chondrus crispus] >gi|507107999|emb|CDF41384.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 56.225 bits (134), Expect = 8.677e-7
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0
Query:   48 DFKVFQRSFLTVALLAMFSDWIQGPYSYALYAHYG 82
            DF+ FQ ++L V LLA+ +DW+QGPY YALYA YG
Sbjct:   45 DFRAFQNNYLLVYLLAIAADWLQGPYVYALYAEYG 79          
The following BLAST results are available for this feature:
BLAST of EWM23713.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585104869|gb|EWM23713.1|7.342e-81100.00Protein of unknown function DUF791 [Nannochloropsi... [more]
gi|675386791|gb|KFM79688.1|8.530e-1044.16hypothetical protein X975_13749, partial [Stegodyp... [more]
gi|443687296|gb|ELT90330.1|9.067e-973.53hypothetical protein CAPTEDRAFT_161785 [Capitella ... [more]
gi|1067061357|ref|XP_018017864.1|1.220e-743.08PREDICTED: molybdate-anion transporter-like isofor... [more]
gi|1067061359|ref|XP_018017872.1|1.281e-743.08PREDICTED: molybdate-anion transporter-like isofor... [more]
gi|1022762147|gb|KZS08001.1|4.520e-754.35Molybdate-anion transporter [Daphnia magna][more]
gi|686635241|ref|XP_009310066.1|5.544e-752.00hypothetical protein DQ04_02361000 [Trypanosoma gr... [more]
gi|926619306|ref|XP_013774896.1|6.403e-747.83PREDICTED: molybdate-anion transporter-like [Limul... [more]
gi|546302371|ref|XP_005711678.1|8.677e-762.86unnamed protein product [Chondrus crispus] >gi|507... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6976rna6976Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications