EWM23719.1, cds6954 (CDS) Nannochloropsis gaditana

Overview
NameEWM23719.1
Unique Namecds6954
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:137144..137160 -
Alignment locationCM002470.1:136453..136759 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23719.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100688g3.1211.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:137144..137160 -
CM002470.1supercontigCM002470.1:136453..136759 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23719.1 vs. NCBI_GenBank
Match: gi|585104878|gb|EWM23719.1| (hypothetical protein Naga_100688g3 [Nannochloropsis gaditana])

HSP 1 Score: 213.772 bits (543), Expect = 2.834e-70
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:    1 MPVTFSARQRAQTTKREVPEDVLLASVHETPWAVAALRQLVDYCVSIDNDVGGEPRLVGRCEGSGQEGGETEARETWREFRGVWRGDGGVGSQFSEGGGEGGRHEEG 107
            MPVTFSARQRAQTTKREVPEDVLLASVHETPWAVAALRQLVDYCVSIDNDVGGEPRLVGRCEGSGQEGGETEARETWREFRGVWRGDGGVGSQFSEGGGEGGRHEEG
Sbjct:    1 MPVTFSARQRAQTTKREVPEDVLLASVHETPWAVAALRQLVDYCVSIDNDVGGEPRLVGRCEGSGQEGGETEARETWREFRGVWRGDGGVGSQFSEGGGEGGRHEEG 107
The following BLAST results are available for this feature:
BLAST of EWM23719.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104878|gb|EWM23719.1|2.834e-70100.00hypothetical protein Naga_100688g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6970rna6970Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications