EWM23720.1, cds6952 (CDS) Nannochloropsis gaditana

Overview
NameEWM23720.1
Unique Namecds6952
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:133280..133371 -
Alignment locationCM002470.1:133104..133215 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23720.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100688g1.1212.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:133280..133371 -
CM002470.1supercontigCM002470.1:133104..133215 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23720.1 vs. NCBI_GenBank
Match: gi|585104879|gb|EWM23720.1| (hypothetical protein Naga_100688g1 [Nannochloropsis gaditana])

HSP 1 Score: 135.191 bits (339), Expect = 2.521e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MYPSTTSVDTASIHILYSLKRYTARMLEHIALLWASLSLKRMARWLIAQSLSSRRFGLQMCSGRRPT 67
            MYPSTTSVDTASIHILYSLKRYTARMLEHIALLWASLSLKRMARWLIAQSLSSRRFGLQMCSGRRPT
Sbjct:    1 MYPSTTSVDTASIHILYSLKRYTARMLEHIALLWASLSLKRMARWLIAQSLSSRRFGLQMCSGRRPT 67
The following BLAST results are available for this feature:
BLAST of EWM23720.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104879|gb|EWM23720.1|2.521e-40100.00hypothetical protein Naga_100688g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6968rna6968Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications