EWM23726.1, cds6947 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|585104888|gb|EWM23726.1| (hypothetical protein Naga_101519g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 455.292 bits (1170), Expect = 6.818e-162 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query: 1 MQEAAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVMHDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFEVREG 225
MQEAAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVMHDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFEVREG
Sbjct: 1 MQEAAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVMHDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFEVREG 225
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|298712683|emb|CBJ48708.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 150.599 bits (379), Expect = 6.293e-41 Identity = 85/199 (42.71%), Postives = 110/199 (55.28%), Query Frame = 0
Query: 23 SLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVMHDLTFGAPALIRGKKKVL-NGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEF 220
+++LT+LE NSW+WE+ + +LVDPV + FG P L++ K+VL +G M LA D L+ISQGFDDHC P +I + LL PS +VAP SA VLE F RI Y+ PG+ L GGR V++ ATTG LGPPWQ ENG ++ G E+ E SLY+EPH F E
Sbjct: 26 AIKLTYLELNSWMWEVN-------------GINILVDPVFGTVDFGVPLLVQANKQVLSDGERAMRELAAVTDFLVISQGFDDHCHPPTIKGLSGLLKPSVRLVAPPSAKAVLEEHFPASRITYILPGQSTVLSA---GGR---AVEIKATTGAILGPPWQQAENGVIVRPVAADGDEKDPEGGSLYFEPHLFFDESEL 205
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|1040924226|ref|XP_017224317.1| (PREDICTED: uncharacterized protein LOC108200611 [Daucus carota subsp. sativus]) HSP 1 Score: 130.183 bits (326), Expect = 1.063e-32 Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 0
Query: 5 AGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRF 215
+ VVS + S+SS + +LT+LE NSWLWE+ LT+LVDP++ +L FG P L KK L + S P++D+LLI+Q DDHC ++ A++LP + +++A +A +L+ F + + YL PG+ + DG RVKV AT G LGPPWQ PENGYL+ +G+ +LY EPHC +
Sbjct: 57 SAVVSEEQAVDSSSSGVDTFKLTYLEGNSWLWEVG-------------GLTILVDPILVGNLDFGIPWLYDAAKKFLKTYKL--SSLPKIDYLLITQSLDDHCHMKTLEPLAQMLP-NLNVIATLNAKALLDPVF--KNVVYLEPGQSFEM-----AASDGSRVKVKATAGPVLGPPWQRPENGYLVT------SPQGQ--LTLYLEPHCVY 237
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|255576525|ref|XP_002529154.1| (PREDICTED: uncharacterized protein LOC8260404 [Ricinus communis] >gi|223531433|gb|EEF33267.1| conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 129.028 bits (323), Expect = 2.323e-32 Identity = 79/219 (36.07%), Postives = 118/219 (53.88%), Query Frame = 0
Query: 4 AAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFE 221
+ VVS ++ S+S + +++LT+LE NSWLWE+ + LLVDP++ +L FG P L KK++ + + P VD LLI+Q DDHC ++ + LP + I+A +A +L+ F + YL PGE+ +E G++G +V+V AT G LGPPWQ PENGYL+ +G+ +LYYEPHC + E
Sbjct: 55 VSAVVSEETAVGSSSGTNDAIKLTYLEGNSWLWEVS-------------GINLLVDPILVGNLDFGIPWLYDAAKKLIKNFQLND--LPEVDSLLITQSLDDHCHLKTLKPLSEKLP-NIRIIATPNAQPLLDPLFC--NVTYLEPGENAEIE-----GKNGSKVRVQATAGPVLGPPWQRPENGYLV------SSPQGQ--MTLYYEPHCVYDKNFLE 242
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|672118175|ref|XP_008782288.1| (PREDICTED: uncharacterized protein LOC103701860 [Phoenix dactylifera]) HSP 1 Score: 128.257 bits (321), Expect = 6.120e-32 Identity = 79/209 (37.80%), Postives = 114/209 (54.55%), Query Frame = 0
Query: 9 SPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFK 216
SP ++S S + S +RLT+LE NSWLW++ +++LVDP++ +L FG P L G KKVL +E L P +D L+I+Q DDHC ++ ++ LP ++A +A +L F+ + YL PG+ +E GR G RV + AT G LGPPWQ PENGY+++ G+ SLYYEPHC +
Sbjct: 57 SPRATSALVSETTSPIRLTYLEVNSWLWDVG-------------GVSILVDPLLVGNLDFGLPWLFDGAKKVLKK-FQLEDL-PEIDCLVITQSLDDHCHVRTLTPLSKKLP-DLPVIATPNAEGILRPLFN--NVIYLEPGQSSDVE-----GRHGARVNICATAGPVLGPPWQRPENGYMVKCGQSH--------LSLYYEPHCVYN 234
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|802680898|ref|XP_012082037.1| (uncharacterized protein LOC105641988 [Jatropha curcas] >gi|643718015|gb|KDP29371.1| hypothetical protein JCGZ_18292 [Jatropha curcas]) HSP 1 Score: 127.102 bits (318), Expect = 1.695e-31 Identity = 80/214 (37.38%), Postives = 114/214 (53.27%), Query Frame = 0
Query: 4 AAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFK 216
+ V+S S+ S+S+ +LT+LE NSWLWE+ + +LVDP++ +L FG P L KK L + S P VD LLI+Q DDHC ++ + +LP + ++A +A +L+ FS + YL PG+ +E RDG +VKV AT G LGPPWQ PENGYL+ +G+ +LYYEPHC +
Sbjct: 58 VSAVISEESAVGSSSAGTDVFKLTYLEGNSWLWEVG-------------GVKILVDPILVGNLDFGIPWLYDAAKKFLKNFQL--SNLPEVDCLLITQSLDDHCHLKTLKPLSEILP-NLRVIATPNAKPLLDPRFS--NVTYLEPGQSSEIE-----ARDGSKVKVQATAGPVLGPPWQRPENGYLV------NSPQGQ--LTLYYEPHCVYN 240
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|719967843|ref|XP_010263075.1| (PREDICTED: uncharacterized protein LOC104601444 [Nelumbo nucifera]) HSP 1 Score: 127.102 bits (318), Expect = 3.655e-31 Identity = 78/219 (35.62%), Postives = 115/219 (52.51%), Query Frame = 0
Query: 4 AAGVVSPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFE 221
+ VVS ++ STS+ +LT+LE NSWLW++ + +LVDP++ +L FG P L KKVL + + P VD LLI+Q DDHC ++ + + P + ++A +A +L FS + YL PG+ +E G++G +V V AT G LGPPWQ PENGYL+ + ++ +LYYEPHC + E E
Sbjct: 96 VSAVVSEENAVGSTSAGTYLFKLTYLEGNSWLWDVG-------------GVKILVDPILVGNLDFGIPWLYDAAKKVLKNFRLSD--LPEVDCLLITQSLDDHCHLKTLKPLSEMFP-NLRVIATPNAEAMLNPLFS--NVTYLEPGQSSEIE-----GKNGLKVIVKATAGPILGPPWQRPENGYLITY--------RQDCLTLYYEPHCVYNKEFLE 283
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|1130666380|ref|XP_010926486.2| (PREDICTED: uncharacterized protein LOC105048747 isoform X2 [Elaeis guineensis]) HSP 1 Score: 127.102 bits (318), Expect = 1.794e-30 Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 0
Query: 9 SPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFK 216
SP ++S S + S +RLT+LE NSWLW + +++LVDP++ +L FG P L G KKVL V + P +D L+I+Q DDHC ++ ++ LP I P +A +L F+ + YL PG+ ++ G+ G RV V AT G LGPPWQ PENGY+++ G+ SLYYEPHC +
Sbjct: 243 SPRATSAVVSETTSPIRLTYLEVNSWLWVVG-------------GVSILVDPLLVGNLDFGLPWLFDGAKKVLKKFQVED--LPEIDCLVITQSLDDHCHVRTLTRLSKKLPDLPVIATP-NAEGILRPLFN--NVTYLEPGQSSDVD-----GKHGARVNVCATAGPILGPPWQRPENGYIVKCGQSH--------LSLYYEPHCVYN 420
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|1130666378|ref|XP_010926485.2| (PREDICTED: uncharacterized protein LOC105048747 isoform X1 [Elaeis guineensis]) HSP 1 Score: 127.102 bits (318), Expect = 2.062e-30 Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 0
Query: 9 SPSSSSTSTSSSPSSLRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFK 216
SP ++S S + S +RLT+LE NSWLW + +++LVDP++ +L FG P L G KKVL V + P +D L+I+Q DDHC ++ ++ LP I P +A +L F+ + YL PG+ ++ G+ G RV V AT G LGPPWQ PENGY+++ G+ SLYYEPHC +
Sbjct: 243 SPRATSAVVSETTSPIRLTYLEVNSWLWVVG-------------GVSILVDPLLVGNLDFGLPWLFDGAKKVLKKFQVED--LPEIDCLVITQSLDDHCHVRTLTRLSKKLPDLPVIATP-NAEGILRPLFN--NVTYLEPGQSSDVD-----GKHGARVNVCATAGPILGPPWQRPENGYIVKCGQSH--------LSLYYEPHCVYN 420
BLAST of EWM23726.1 vs. NCBI_GenBank
Match: gi|470122208|ref|XP_004297137.1| (PREDICTED: uncharacterized protein LOC101304764 [Fragaria vesca subsp. vesca]) HSP 1 Score: 124.02 bits (310), Expect = 3.032e-30 Identity = 78/220 (35.45%), Postives = 114/220 (51.82%), Query Frame = 0
Query: 4 AAGVVSPSSSSTSTSSSPSS-LRLTFLESNSWLWEIPLPPSSLPPSLPPPSLTLLVDPVM-HDLTFGAPALIRGKKKVLNGPAVMESLAPRVDHLLISQGFDDHCQPASIAMAARLLPPSAHIVAPQSASKVLETFFSPERIHYLSPGEHCYLEKRREGGRDGGRVKVTATTGDTLGPPWQAPENGYLLEWGEKGGREEGEEPRSLYYEPHCRFKVEEFE 221
+ +VS ++ TS+SS + +LT+LE NSWLW++ + LLVDP++ +L FG P L K+ L + + P VD LLI+Q DDHC ++ + P + ++A +A +L+ FS + YL PG+ +E R+G +VKV AT G LGPPWQ PENGYL+ +E +LYYEPHC + E
Sbjct: 64 VSALVSEENAVTSSSSDDTDGFKLTYLEGNSWLWDVG-------------GVKLLVDPILVGNLDFGIPWLYDAAKRFLKNFQLTD--VPEVDCLLITQSLDDHCHLKTLKPLSEKYP-TLRVIATPNAKALLDPLFS--NVTYLEPGQSSTIE-----ARNGAKVKVQATAGPVLGPPWQRPENGYLV--------ISPQEKLTLYYEPHCVYNTGSVE 252 The following BLAST results are available for this feature:
BLAST of EWM23726.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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