EWM23732.1, cds6943 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|585104903|gb|EWM23732.1| (cytochrome c1 heme lyase [Nannochloropsis gaditana]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MAAEPSQARGTEPSEACLVKNSSNRSDPVRHPPTGTNGFFSALRGWFHPSNPSDSTELESNSSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTPPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEWFGKEGGKDRMLPAWTATFTAMVGGREGVGEGGKEGERGGVVPGAGGASK 323
MAAEPSQARGTEPSEACLVKNSSNRSDPVRHPPTGTNGFFSALRGWFHPSNPSDSTELESNSSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTPPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEWFGKEGGKDRMLPAWTATFTAMVGGREGVGEGGKEGERGGVVPGAGGASK
Sbjct: 1 MAAEPSQARGTEPSEACLVKNSSNRSDPVRHPPTGTNGFFSALRGWFHPSNPSDSTELESNSSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTPPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEWFGKEGGKDRMLPAWTATFTAMVGGREGVGEGGKEGERGGVVPGAGGASK 323
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|1173943526|gb|OQR92367.1| (cytochrome c1 heme lyase [Achlya hypogyna]) HSP 1 Score: 189.119 bits (479), Expect = 4.074e-55 Identity = 104/219 (47.49%), Postives = 140/219 (63.93%), Query Frame = 0
Query: 62 SSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGS-----TPPKLKRFMGRPQDLSPKAAWLWMCGY-NKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEW 274
+ GCPV + S + +N LN Q P Q+ PLST+R S+IP + P HQ K + W YPSEQQYFNAMK KG+DP +D+ +I++IHN +NE+GW +V+E E L + PKL RFMGRP+DL+PKA L + G N PFDRHDW+V+R +G E+RYVIDFY+GQ KP+S+++DVRPALD+ VG VD + ++
Sbjct: 17 AGGCPVDHSQAGTSMAGLNALNFMEPADQRVAPGQSAPLSTTRVASTIPMGSYVPAHQ-KEGQETWQYPSEQQYFNAMKRKGWDPQERDMKVIVSIHNTINEKGWAEVVEMEKTLHADAYVNAEPKLVRFMGRPKDLTPKARLLNVFGMANLPFDRHDWIVDR-NGEEIRYVIDFYSGQPTPG--KPISVYMDVRPALDN-------VGNAVDRLRMQF 224
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|669147386|ref|XP_008609255.1| (hypothetical protein SDRG_05320 [Saprolegnia diclina VS20] >gi|530738851|gb|EQC37093.1| hypothetical protein SDRG_05320 [Saprolegnia diclina VS20]) HSP 1 Score: 186.037 bits (471), Expect = 1.214e-53 Identity = 104/220 (47.27%), Postives = 137/220 (62.27%), Query Frame = 0
Query: 62 SSGCPV-QGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTP-----PKLKRFMGRPQDLSPKAAWLWMCGY-NKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEW 274
+ GCPV + PS + +N LN Q Q+VPLST R S+IP + P HQ K D W YPSEQQYFNAMK KG+DP +D+ +I++IHN +NE+GW +V+E E L PKL RFMGRP+D +PKA L + G N PFDRHDW+++R +G EVRYVIDFYTG KP+S+++DVRPALD+ +G VD + ++
Sbjct: 29 TGGCPVDHSKMGGPSMAGLNTLNFMEPADQSVAKGQSVPLSTQRVASTIPMGSYVPAHQ-KEGQDTWQYPSEQQYFNAMKRKGWDPQERDMKVIVSIHNTINEKGWAEVVETEKTLHGDAYTHGDPKLVRFMGRPKDFTPKARLLNLFGMANLPFDRHDWIIDR-NGEEVRYVIDFYTGHPTPG--KPISVYMDVRPALDN-------IGNAVDRLRMQF 237
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|1084350077|dbj|BAV82448.1| (cytochrome c heme-lyase [Roombia sp. NY0200]) HSP 1 Score: 186.422 bits (472), Expect = 1.559e-53 Identity = 119/297 (40.07%), Postives = 162/297 (54.55%), Query Frame = 0
Query: 7 QARGTEPSEACLVK---NSSNRSDPVRHPPTGTNGFFSALRGWFHPSNPSDSTELESNSSGCPVQ-------GRASPPSSSPV----NPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWE-----GGLGST-----------PPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQT--DVKDPKPVSMHLDVRPALDSMAAVRMRVGR-TVDEW 270
A T +E C VK +S R PV H ++G P+N T+++ + CPV+ + PPS+ P+ NP NN +Q P P Q PL R +SSIP + KWVYPSEQ +FNAMK KG+ P +D+ +++AIHN NE+ W ++L WE G G+ PPKL RF GRP DLSPKA +L M GY++PFDRHDW+VER + +VRYVIDFY G T +P++MHLDVRPA+DS++ +R+ + +D W
Sbjct: 13 HALRTPAAEQCPVKPKVDSEPRECPVDHRSNASDG----------PNN----TKIQG-TEACPVKQTSKEETTQTVPPSACPMHAHFNPNNNMSAPNQQPAPDQRFPLPRERVVSSIPNGSVADEEA------KWVYPSEQMFFNAMKKKGWSPSEKDMPLVVAIHNTTNEKAWNEILRWEQFALTGSKGAPTDAASSTPPVPPPKLVRFQGRPNDLSPKAWFLSMIGYSRPFDRHDWLVERTNKEQVRYVIDFYEGGTVPSTSRRQPIAMHLDVRPAVDSLSLAVVRLHKFFLDLW 288
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|813127831|ref|XP_012197473.1| (hypothetical protein SPRG_03495 [Saprolegnia parasitica CBS 223.65] >gi|641537722|gb|KDO31566.1| hypothetical protein SPRG_03495 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 184.882 bits (468), Expect = 2.647e-53 Identity = 103/220 (46.82%), Postives = 137/220 (62.27%), Query Frame = 0
Query: 62 SSGCPV-QGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTP-----PKLKRFMGRPQDLSPKAAWLWMCGY-NKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVDEWKEEW 274
+ GCPV + PS + +N LN Q Q+VPLST R S+IP + P HQ K + W YPSEQQYFNAMK KG+DP +D+ +I++IHN +NE+GW +V+E E L PKL RFMGRP+D +PKA L + G N PFDRHDW+++R +G EVRYVIDFYTG KP+S+++DVRPALD+ +G VD + ++
Sbjct: 29 TGGCPVDHSKMGGPSMAGLNTLNFMEPADQSVAKGQSVPLSTQRVASTIPMGSYVPAHQ-KEGQETWQYPSEQQYFNAMKRKGWDPQERDMKVIVSIHNTINEKGWAEVVEMEKTLHGDAYTRGDPKLVRFMGRPKDFTPKARLLNLFGMANLPFDRHDWIIDR-NGEEVRYVIDFYTGHP--TPGKPISVYMDVRPALDN-------IGNAVDRLRMQF 237
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|673043191|ref|XP_008875556.1| (hypothetical protein H310_10855 [Aphanomyces invadans] >gi|574468788|gb|ETV95805.1| hypothetical protein H310_10855 [Aphanomyces invadans]) HSP 1 Score: 183.726 bits (465), Expect = 4.514e-53 Identity = 105/221 (47.51%), Postives = 138/221 (62.44%), Query Frame = 0
Query: 60 SNSSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLG-------STP-PKLKRFMGRPQDLSPKAAWLWMCGY-NKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALD----SMAAVRMRVGRTV 267
+ S GCPV + S +N LN Q VPLST R SSIP F P+HQ + W YPSEQQYFNAMK KG+DP +D+ +I++IHN +NE+GW V+E+E L + P PKL RFMGRP+D SPKA ++ G N PFDRHDW+V+R +G+EVRYVIDFYTG KP+S+++DVRPALD ++ +RM+ +T+
Sbjct: 12 AKSGGCPVDHLNPDAAKSGLNSLNFMEPADHTVDAKQKVPLSTHRVASSIPMGSFVPQHQTE-GQQTWQYPSEQQYFNAMKRKGWDPEERDMKVIVSIHNTINEKGWADVVEFERTLHPEAYNSETCPEPKLVRFMGRPKDFSPKARFMNTIGVANLPFDRHDWIVDR-NGTEVRYVIDFYTGHP--VPGKPLSVYMDVRPALDNFENAVDRLRMQFHKTI 228
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|470249343|ref|XP_004366903.1| (cytochrome c heme-lyase [Dictyostelium fasciculatum] >gi|328871550|gb|EGG19920.1| cytochrome c heme-lyase [Dictyostelium fasciculatum]) HSP 1 Score: 179.104 bits (453), Expect = 8.113e-52 Identity = 91/218 (41.74%), Postives = 128/218 (58.72%), Query Frame = 0
Query: 53 SDSTELESNSSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGS--TPPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRVGRTVD 268
+ T + + GCPV + + +NP NN + +Q P Q +PL TSR SSIP+++ D+W YPS Q +FNAMK K + P +D+ +++AIHN VNE+ W VL+WE S PKL +F GR +D SPKA L GY PFDRHDW+++R G +VRYVIDFY G+ D ++ KP+ ++LDVRPA+D R + +
Sbjct: 2 DEETRKNALAGGCPVAHEPTTATPKDINPNNNMYRPNQKPHVDQTLPLDTSRVKSSIPRTE----------QDQWEYPSPQMFFNAMKRKQYQPSEKDMDMVVAIHNTVNEKCWEHVLDWEKEYSSECDKPKLVKFRGRAKDFSPKARILNFFGYTLPFDRHDWIIDRC-GKQVRYVIDFYEGKADKENNKPIGIYLDVRPAIDDFQTFTDRFKKLFN 208
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|760438243|ref|XP_011396190.1| (putative cytochrome c-type heme lyase [Auxenochlorella protothecoides] >gi|675350880|gb|KFM23320.1| putative cytochrome c-type heme lyase [Auxenochlorella protothecoides]) HSP 1 Score: 177.563 bits (449), Expect = 2.089e-51 Identity = 98/184 (53.26%), Postives = 115/184 (62.50%), Query Frame = 0
Query: 89 SQVPQPSQAVPLSTSREISSIPKSDFTP--KHQPKWA--GDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGSTPPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAA----VRMRVG 264
S PQP Q+ PLST R+ SSIP P +HQP W YPSEQ ++NAM+ KG+ P +D+ ++AIHNAVNE+ WR+V WE G P L RF GRP D+SPKA L GY PFDRHDWVVER G EVRYVIDFY G P +MHLDVRPALDS A +RM+ G
Sbjct: 5 SNSPQPGQSKPLSTWRQASSIPAGGEAPLPEHQPAHGVRSGVWTYPSEQMFYNAMRRKGWTPSEEDMTAVVAIHNAVNERAWREVRAWEAAAGCPAPTLLRFRGRPADVSPKARLLNALGYRLPFDRHDWVVERGGGREVRYVIDFYNGAPSPD--MPTAMHLDVRPALDSPLALWERLRMQAG 186
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|831764211|ref|XP_012751110.1| (hypothetical protein SAMD00019534_092420 [Acytostelium subglobosum LB1] >gi|735851742|dbj|GAM26067.1| hypothetical protein SAMD00019534_092420 [Acytostelium subglobosum LB1]) HSP 1 Score: 178.333 bits (451), Expect = 2.097e-51 Identity = 92/204 (45.10%), Postives = 124/204 (60.78%), Query Frame = 0
Query: 62 SSGCPVQGRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGLGST--PPKLKRFMGRPQDLSPKAAWLWMCGYNKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMAAVRMRV 263
+ GCPV + +NP NN + +Q P P Q +PL T R SSIP+++ D W YPS+Q +FNAMK K + P QD+ +++AIHN VNE+ W VLEWE PKL +F GR QD SPKA L GY PFDRHDW V+R +G +VRY+IDFY G+ D + K V ++LDVRPA+D + +++ R+
Sbjct: 25 AGGCPV--------AHDINPTNNMYRPNQKPHPEQKLPLGTDRIKSSIPRTE----------KDNWEYPSQQMFFNAMKRKNYQPDEQDMQVVIAIHNTVNEKCWDHVLEWEKEFKDECPNPKLIKFRGRAQDFSPKARLLNFVGYKLPFDRHDWTVDR-NGKQVRYIIDFYEGKLDKETNKSVGIYLDVRPAIDDVQSLKSRL 209
BLAST of EWM23732.1 vs. NCBI_GenBank
Match: gi|698804916|ref|XP_009835487.1| (hypothetical protein H257_10588 [Aphanomyces astaci] >gi|574109480|gb|ETV74983.1| hypothetical protein H257_10588 [Aphanomyces astaci]) HSP 1 Score: 179.104 bits (453), Expect = 2.452e-51 Identity = 105/218 (48.17%), Postives = 137/218 (62.84%), Query Frame = 0
Query: 64 GCPVQGRA-SPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWEGGL-----GSTP---PKLKRFMGRPQDLSPKAAWLWMCGY-NKPFDRHDWVVERADGSEVRYVIDFYTGQTDVKDPKPVSMHLDVRPALDSMA----AVRMRVGRTV 267
GCPV + S +N LN P Q VPLST R S+IP F P+HQ + W YPSEQQYFNAMK KG+DP +D+ +I++IHN +NE+GW V+ +E L GS PKL RFMGRP+D SPKA +L G N PFDRHDW+V+R +G+EVRYVIDFY+GQ KP+S+++DVRPALD++ VRM+ +++
Sbjct: 16 GCPVDHSGPDAAAKSGLNALNFMEPADHTVDPKQKVPLSTHRVQSTIPMGSFVPQHQTE-GQQTWQYPSEQQYFNAMKRKGWDPEERDMKVIVSIHNTINEKGWSDVVAFERTLHPDAYGSDKCPEPKLVRFMGRPKDFSPKARFLNTIGVANLPFDRHDWIVDR-NGTEVRYVIDFYSGQP--VPGKPLSVYMDVRPALDTVQNAVDRVRMQFHKSI 229 The following BLAST results are available for this feature:
BLAST of EWM23732.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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