EWM23744.1, cds6929 (CDS) Nannochloropsis gaditana

Overview
NameEWM23744.1
Unique Namecds6929
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:77379..77618 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23744.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102447g1.2345.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:77379..77618 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23744.1 vs. NCBI_GenBank
Match: gi|585104932|gb|EWM23744.1| (hypothetical protein Naga_102447g1 [Nannochloropsis gaditana])

HSP 1 Score: 146.362 bits (368), Expect = 1.992e-44
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 
Query:    1 MDDSSCEMIGFQKRHTKGSLWRILRDIHEEGIEEGREGGGEGEGEEGVHRDVWSEVEDSERRSRRREGRRKGEREGGRS 79
            MDDSSCEMIGFQKRHTKGSLWRILRDIHEEGIEEGREGGGEGEGEEGVHRDVWSEVEDSERRSRRREGRRKGEREGGRS
Sbjct:    1 MDDSSCEMIGFQKRHTKGSLWRILRDIHEEGIEEGREGGGEGEGEEGVHRDVWSEVEDSERRSRRREGRRKGEREGGRS 79
The following BLAST results are available for this feature:
BLAST of EWM23744.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104932|gb|EWM23744.1|1.992e-44100.00hypothetical protein Naga_102447g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6945rna6945Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications