EWM23747.1, cds6926 (CDS) Nannochloropsis gaditana

Overview
NameEWM23747.1
Unique Namecds6926
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:71062..71240 +
Alignment locationCM002470.1:71385..71496 +
Alignment locationCM002470.1:71797..71895 +
Alignment locationCM002470.1:72012..72020 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23747.1
Productstress-induced protein
Orig transcript idgnl|cribi|Naga_101744g1.2180.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:71062..71240 +
CM002470.1supercontigCM002470.1:71385..71496 +
CM002470.1supercontigCM002470.1:71797..71895 +
CM002470.1supercontigCM002470.1:72012..72020 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|585104938|gb|EWM23747.1| (stress-induced protein [Nannochloropsis gaditana])

HSP 1 Score: 271.552 bits (693), Expect = 2.321e-92
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 MSAPTCTGETPSASSHQSVEKEEKADKDKTTEGSNEEDEEYRVLAERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRYAIT 132
            MSAPTCTGETPSASSHQSVEKEEKADKDKTTEGSNEEDEEYRVLAERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRYAIT
Sbjct:    1 MSAPTCTGETPSASSHQSVEKEEKADKDKTTEGSNEEDEEYRVLAERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRYAIT 132
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|298710227|emb|CBJ26302.1| (Heat shock protein 40 like protein [Ectocarpus siliculosus])

HSP 1 Score: 118.242 bits (295), Expect = 8.275e-29
Identity = 55/95 (57.89%), Postives = 76/95 (80.00%), Query Frame = 0 
Query:   36 EEDEEYRVLAERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESE-RGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            +E+E++++ AE +K+EGN AFK G++KEA+  YT+ + IDPDN V +SNRSAA+LK  + + KALKDAER ME+ P+W KS+SR GAAQHAL R+
Sbjct:   16 QEEEDWKIQAEAFKNEGNEAFKTGKWKEAIEGYTRAIDIDPDNKVYFSNRSAAYLKLGDAKSKALKDAERCMELAPEWSKSFSRLGAAQHALGRF 110
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|953503283|emb|CEG36051.1| (Predicted molecular chaperone (DnaJ superfamily) [Plasmopara halstedii])

HSP 1 Score: 108.227 bits (269), Expect = 6.054e-25
Identity = 52/92 (56.52%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:   39 EEYRVLAERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESE-RGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            EE+ V AE +K EGN      +Y +A+ +YT+ + +DPDN V YSNRSAA+L   + RGKALKDAER +++KPDW K YSRKGAA+HAL R+
Sbjct:    3 EEWVVQAESFKTEGNKLLALKKYADAVEMYTRAIELDPDNAVYYSNRSAAYLAMGDARGKALKDAERCIDLKPDWWKGYSRKGAAEHALQRF 94
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|675210329|ref|XP_008914049.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568085826|gb|ETN00728.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 103.219 bits (256), Expect = 6.675e-24
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  Y+Q +A+DP++HV YSNRSAA+L   +   AL+DAE  ++ KPDWPK+YSRKGAA HAL RY
Sbjct:    5 AAEWKAKGNAALSAGNPKEAVDCYSQAIALDPNDHVFYSNRSAAYLSLDDATHALEDAELCIKTKPDWPKAYSRKGAALHALKRY 89
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|552845575|ref|XP_005851387.1| (hypothetical protein CHLNCDRAFT_14958, partial [Chlorella variabilis] >gi|307111050|gb|EFN59285.1| hypothetical protein CHLNCDRAFT_14958, partial [Chlorella variabilis])

HSP 1 Score: 96.6709 bits (239), Expect = 8.881e-24
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 0 
Query:   52 GNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            GNAAF  G++ EA+  +T  +A+DP NHVLYSNRSAA+   S+  +AL DA++++E+KPDWPK YSR GAA   L ++
Sbjct:    1 GNAAFSAGQFTEAVEHFTAAIAVDPGNHVLYSNRSAAYSSMSQYQQALGDAQKVVELKPDWPKGYSRLGAAHFGLRQW 78
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|301096247|ref|XP_002897221.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107306|gb|EEY65358.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 105.145 bits (261), Expect = 1.017e-23
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  YTQ +A+DP++HV YSNRSAA+L   +   AL+DAE  +  KPDWPK+YSRKGAA HAL RY
Sbjct:  321 AAEWKAKGNAALSAGNPKEAVDCYTQAIALDPNDHVFYSNRSAAYLSLDDAAHALEDAELCISTKPDWPKAYSRKGAALHALKRY 405

HSP 2 Score: 66.2402 bits (160), Expect = 4.809e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   49 KDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            K+EGN  FK G + +A+  YT+ +  DP   V Y+NR+AA+ K +   +A KD E+ +E+ P + K+YSR GA Q  +  +
Sbjct:  700 KNEGNEFFKNGEFPQAVERYTEAIKRDPSCAVYYANRAAAYTKLTSFNEAKKDCEKAIELDPKYVKAYSRMGAIQCFMKEF 780
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|970641277|gb|KUF83458.1| (Stress-induced-phosphoprotein 1 [Phytophthora nicotianae])

HSP 1 Score: 103.605 bits (257), Expect = 3.815e-23
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  Y+Q +A+DP++HV YSNRSAA+L   +   AL+DAE  ++ KPDWPK+YSRKGAA HAL RY
Sbjct:  264 AAEWKAKGNAALSAGNPKEAVDCYSQAIALDPNDHVFYSNRSAAYLSLDDATHALEDAELCIKTKPDWPKAYSRKGAALHALKRY 348

HSP 2 Score: 65.855 bits (159), Expect = 6.388e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   49 KDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            K+EGN  FK G + +A+  YT+ +  DP   V Y+NR+AA+ K +   +A KD E+ +E+ P + K+YSR GA Q  +  +
Sbjct:  643 KNEGNEFFKNGEFPKAVERYTEAIKRDPSCAVYYANRAAAYTKLTSFNEAKKDCEKAIELDPKYVKAYSRMGAIQCFMKEF 723
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|570968227|gb|ETP31346.1| (hypothetical protein F442_19786 [Phytophthora parasitica P10297])

HSP 1 Score: 102.834 bits (255), Expect = 6.035e-23
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  Y+Q +A+DP++HV YSNRSAA+L   +   AL+DAE  ++ KPDWPK+YSRKGAA HAL RY
Sbjct:    5 AAEWKAKGNAALSAGNPKEAVDCYSQAIALDPNDHVFYSNRSAAYLSLDDATHALEDAELCIKTKPDWPKAYSRKGAALHALKRY 89

HSP 2 Score: 65.855 bits (159), Expect = 6.401e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   49 KDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            K+EGN  FK G + +A+  YT+ +  DP   V Y+NR+AA+ K +   +A KD E+ +E+ P + K+YSR GA Q  +  +
Sbjct:  384 KNEGNEFFKNGEFPKAVERYTEAIKRDPSCAVYYANRAAAYTKLTSFNEAKKDCEKAIELDPKYVKAYSRMGAIQCFMKEF 464
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|567976581|gb|ETL27102.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 102.834 bits (255), Expect = 6.277e-23
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  Y+Q +A+DP++HV YSNRSAA+L   +   AL+DAE  ++ KPDWPK+YSRKGAA HAL RY
Sbjct:    5 AAEWKAKGNAALSAGNPKEAVDCYSQAIALDPNDHVFYSNRSAAYLSLDDATHALEDAELCIKTKPDWPKAYSRKGAALHALKRY 89

HSP 2 Score: 65.855 bits (159), Expect = 6.401e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   49 KDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            K+EGN  FK G + +A+  YT+ +  DP   V Y+NR+AA+ K +   +A KD E+ +E+ P + K+YSR GA Q  +  +
Sbjct:  384 KNEGNEFFKNGEFPKAVERYTEAIKRDPSCAVYYANRAAAYTKLTSFNEAKKDCEKAIELDPKYVKAYSRMGAIQCFMKEF 464
[Close]
BLAST of EWM23747.1 vs. NCBI_GenBank
Match: gi|675210327|ref|XP_008914048.1| (hypothetical protein PPTG_17912 [Phytophthora parasitica INRA-310] >gi|566010423|gb|ETI33334.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567947893|gb|ETK73662.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568035950|gb|ETM33573.1| hypothetical protein L914_19199 [Phytophthora parasitica] >gi|568085825|gb|ETN00727.1| hypothetical protein PPTG_17912 [Phytophthora parasitica INRA-310] >gi|570314141|gb|ETO62089.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570937920|gb|ETP03177.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 102.834 bits (255), Expect = 6.658e-23
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   45 AERYKDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            A  +K +GNAA   G  KEA+  Y+Q +A+DP++HV YSNRSAA+L   +   AL+DAE  ++ KPDWPK+YSRKGAA HAL RY
Sbjct:    5 AAEWKAKGNAALSAGNPKEAVDCYSQAIALDPNDHVFYSNRSAAYLSLDDATHALEDAELCIKTKPDWPKAYSRKGAALHALKRY 89

HSP 2 Score: 65.4698 bits (158), Expect = 6.464e-10
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   49 KDEGNAAFKEGRYKEALALYTQGVAIDPDNHVLYSNRSAAFLKESERGKALKDAERLMEIKPDWPKSYSRKGAAQHALTRY 129
            K+EGN  FK G + +A+  YT+ +  DP   V Y+NR+AA+ K +   +A KD E+ +E+ P + K+YSR GA Q  +  +
Sbjct:  384 KNEGNEFFKNGEFPKAVERYTEAIKRDPSCAVYYANRAAAYTKLTSFNEAKKDCEKAIELDPKYVKAYSRMGAIQCFMKEF 464
The following BLAST results are available for this feature:
BLAST of EWM23747.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104938|gb|EWM23747.1|2.321e-92100.00stress-induced protein [Nannochloropsis gaditana][more]
gi|298710227|emb|CBJ26302.1|8.275e-2957.89Heat shock protein 40 like protein [Ectocarpus sil... [more]
gi|953503283|emb|CEG36051.1|6.054e-2556.52Predicted molecular chaperone (DnaJ superfamily) [... [more]
gi|675210329|ref|XP_008914049.1|6.675e-2456.47hypothetical protein, variant [Phytophthora parasi... [more]
gi|552845575|ref|XP_005851387.1|8.881e-2453.85hypothetical protein CHLNCDRAFT_14958, partial [Ch... [more]
gi|301096247|ref|XP_002897221.1|1.017e-2357.65conserved hypothetical protein [Phytophthora infes... [more]
gi|970641277|gb|KUF83458.1|3.815e-2356.47Stress-induced-phosphoprotein 1 [Phytophthora nico... [more]
gi|570968227|gb|ETP31346.1|6.035e-2356.47hypothetical protein F442_19786 [Phytophthora para... [more]
gi|567976581|gb|ETL27102.1|6.277e-2356.47hypothetical protein, variant [Phytophthora parasi... [more]
gi|675210327|ref|XP_008914048.1|6.658e-2356.47hypothetical protein PPTG_17912 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6942rna6942Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications