EWM23756.1, cds6916 (CDS) Nannochloropsis gaditana

Overview
NameEWM23756.1
Unique Namecds6916
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:47475..47508 +
Alignment locationCM002470.1:47600..47769 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23756.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100573g1.6245.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:47475..47508 +
CM002470.1supercontigCM002470.1:47600..47769 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23756.1 vs. NCBI_GenBank
Match: gi|585104959|gb|EWM23756.1| (hypothetical protein Naga_100573g1 [Nannochloropsis gaditana])

HSP 1 Score: 135.961 bits (341), Expect = 1.408e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MVPRESTDSAPLRFAEAWFRMTNWEVTKRDAMVLEPTLRLDLSLRAIDGRIRSSSSRSRIKAKKYCK 67
            MVPRESTDSAPLRFAEAWFRMTNWEVTKRDAMVLEPTLRLDLSLRAIDGRIRSSSSRSRIKAKKYCK
Sbjct:    1 MVPRESTDSAPLRFAEAWFRMTNWEVTKRDAMVLEPTLRLDLSLRAIDGRIRSSSSRSRIKAKKYCK 67
The following BLAST results are available for this feature:
BLAST of EWM23756.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104959|gb|EWM23756.1|1.408e-40100.00hypothetical protein Naga_100573g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6932rna6932Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications