EWM23764.1, cds6909 (CDS) Nannochloropsis gaditana

Overview
NameEWM23764.1
Unique Namecds6909
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:32477..32521 -
Alignment locationCM002470.1:31980..32177 -
Alignment locationCM002470.1:31770..31874 -
Alignment locationCM002470.1:31197..31676 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23764.1
ProductPhospholipase B
Orig transcript idgnl|cribi|Naga_100439g1.2301.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:32477..32521 -
CM002470.1supercontigCM002470.1:31980..32177 -
CM002470.1supercontigCM002470.1:31770..31874 -
CM002470.1supercontigCM002470.1:31197..31676 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR007000PLipase_B-like
Homology
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|585104975|gb|EWM23764.1| (Phospholipase B [Nannochloropsis gaditana])

HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query:    1 MVLDASARSFNVLDQAPGKVSITEHSPLLFQPEPSLAPSSISSHSLIEQSEKTTEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERLSPGTLLADMLARSQTRAEQRKSRNSLLLRGGGKRLY 275
            MVLDASARSFNVLDQAPGKVSITEHSPLLFQPEPSLAPSSISSHSLIEQSEKTTEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERLSPGTLLADMLARSQTRAEQRKSRNSLLLRGGGKRLY
Sbjct:    1 MVLDASARSFNVLDQAPGKVSITEHSPLLFQPEPSLAPSSISSHSLIEQSEKTTEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERLSPGTLLADMLARSQTRAEQRKSRNSLLLRGGGKRLY 275          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|929765765|ref|XP_014157863.1| (hypothetical protein SARC_03825 [Sphaeroforma arctica JP610] >gi|906955107|gb|KNC83961.1| hypothetical protein SARC_03825 [Sphaeroforma arctica JP610])

HSP 1 Score: 92.8189 bits (229), Expect = 1.017e-17
Identity = 67/187 (35.83%), Postives = 88/187 (47.06%), Query Frame = 0
Query:   59 AYFASYNVPSDREIYDYLGFGLK-DPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTH---PDCFRFEWERLSP 241
             Y+ASYNVP   EIY+  G+  K +    +++ E+    PR  +  + Q  VT M  MKR+++YNDY  D  SLG    AVAGR DL                      G  F  L+GA+DAKV ++     +    +   A  GPT DQQP F W        A+EN TH   PD F F+W    P
Sbjct:  430 GYWASYNVPYFPEIYEKSGWSDKYEKGGDEWSHEK---CPRANIFRQQQSSVTDMDSMKRMLRYNDYENDPLSLGQPGNAVAGRWDL--------------------AKGEKF-QLDGAIDAKVTNI-----AMGRDMKFWAVNGPTSDQQPVFTWK-------AYENITHMGQPDVFDFDWVEFQP 580          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|929765581|ref|XP_014157771.1| (hypothetical protein SARC_03894 [Sphaeroforma arctica JP610] >gi|906954988|gb|KNC83869.1| hypothetical protein SARC_03894 [Sphaeroforma arctica JP610])

HSP 1 Score: 90.5077 bits (223), Expect = 1.720e-17
Identity = 83/245 (33.88%), Postives = 112/245 (45.71%), Query Frame = 0
Query:    4 DASARSFNVLDQAPGKVSITEHSPLLFQPEPSLAPSSISSHSLIEQSEKTTEIPGAYFASYNVPSDREIYDYLGFGLK-DPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLA---VAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTH---PDCFRFEWERLSP 241
            D   +SF V +Q PG   I  +  +  +P  SL  S   S  L E           Y+ASYNVP   E+Y+  G+  K +    +++ E+    PR  +  + Q  VT M+ MKR ++YNDY  +  SLG  Y+    VA R DL                  AQ  G+ F  L+GA+DAKV ++     +    L      GPT DQQP F W       NA+EN TH   PD F F+W  L P
Sbjct:  110 DLPPKSFYVFEQLPG---IIRYQDMTQKPVASLKGSV--SQQLNED---------GYWASYNVPYFPEMYEKSGWSAKYEKGGDEWSHEK---CPRANIFRQQQSSVTDMSFMKRRLRYNDYENNLLSLGQRYVYGNDVARRWDL------------------AQ--GNRF-QLDGAIDAKVTNI-----AMGRDLKFWTVNGPTSDQQPVFTW-------NAYENITHMGQPDVFDFDWVELQP 304          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|1173956780|gb|OQS03481.1| (urease, partial [Thraustotheca clavata])

HSP 1 Score: 79.337 bits (194), Expect = 5.881e-13
Identity = 63/216 (29.17%), Postives = 98/216 (45.37%), Query Frame = 0
Query:   30 FQPEPSLAPSSISSH----SLIEQSEKT-TEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVE-RYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERL 239
            F+P     P  ++        +E ++KT   +   Y+ASYNVP    +Y+  GF  ++  N++  ++  Y  + R ++ S    +V ++  MK +++YNDY  D  S G+   AVA R DL                      GS F  L G +D+KV S   A +     L   A +GPT  QQP F W+  PE  N   +   P  F F++E +
Sbjct:  408 FEPFKGFGPGGLTVLEQMPGAVEYADKTNVLLTQGYWASYNVPYFPNVYNLTGF--REKYNMQQTIDWTYNHTARAQIFSRDAPKVNTIDEMKAIMRYNDYQHDPLSRGNPAWAVAARYDLA--------------------QGSQF-QLHGGIDSKVTSYKRALT-----LECDAILGPTRVQQPTFSWT--PELTNLAAHRGQPSLFAFDFETM 593          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|471208322|ref|XP_004260756.1| (hypothetical protein EIN_181520 [Entamoeba invadens IP1] >gi|440301599|gb|ELP93985.1| hypothetical protein EIN_181520 [Entamoeba invadens IP1] >gi|511091334|dbj|BAN41449.1| hypothetical protein, conserved [Entamoeba invadens])

HSP 1 Score: 77.0258 bits (188), Expect = 2.378e-12
Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 0
Query:   60 YFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEW 236
            Y+ S+NVP D EIY+  G+  K P      V  YT + R ++     ++VT+M  MK ++ YNDY+ D  SL     A+A R DL                       +      GA+D K+V V+E       H++ HA  GPT+ +Q  F +   P+ V     G  PD F F+W
Sbjct:  364 YWGSFNVPYDTEIYEKSGYSQKYPD-----VNEYTDNARAKIFKRDAVKVTNMDEMKHIMLYNDYLNDELSLKEPSNAIAARYDLR---------------------STELPPAFGAIDGKIVKVSEP------HIT-HAISGPTHQEQTPFDFKAFPDVV---REGV-PDLFNFDW 503          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|922856785|gb|KOO25105.1| (phospholipase b-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 77.0258 bits (188), Expect = 2.678e-12
Identity = 54/161 (33.54%), Postives = 72/161 (44.72%), Query Frame = 0
Query:   86 IKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHA-YLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGT---HPDCFRFEWERLSPG 242
            I  A   YT S R ++  E Q EVTS AGM R+I +NDY     ++  +   A+  RGDL  +    +   + G                G +DAK  +V+ A S     L    R GPT D QP FCW+       AFE+     HP CF ++W    PG
Sbjct:  423 IAGATSEYTESVRYKIFEEHQAEVTSPAGMARMIAWNDYQASGETVAKSPAQAIMSRGDLHANDELVIIDRSAG----------------GGIDAKYSTVSAAASG----LISFGRAGPTNDDQPTFCWT------AAFESTKHEGHPHCFDYKWGSFLPG 557          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|145537896|ref|XP_001454659.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124422425|emb|CAK87262.1| unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 75.0998 bits (183), Expect = 1.130e-11
Identity = 62/185 (33.51%), Postives = 88/185 (47.57%), Query Frame = 0
Query:   58 GAYFASYNVPSDREIYDYLGFG---LKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTH---PDCFRFEW 236
            G Y+ SYN+P   E+YD  G+     KDP  IKY+ E+    PR +M++    +V S+  MKR I+YNDY  D+ S  +   A++ R DL                    +  +P A   G++D K+ S+    S P+N   + +  GPT DQQP F W+       AF  G H   P  F F W
Sbjct:  439 GNYWKSYNIPFTTEVYDRAGYTEAVKKDP--IKYSYEQ---CPRGQMMNRDAPKVKSLDDMKRFIRYNDYKNDAISGNNPGNAISSRLDL--------------------LETNPKA--HGSIDGKIASLA---SVPQNIAYIQS--GPTTDQQPVFSWTP------AF-TGIHWGQPTTFNFPW 584          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|156388178|ref|XP_001634578.1| (predicted protein [Nematostella vectensis] >gi|156221663|gb|EDO42515.1| predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 72.4034 bits (176), Expect = 1.163e-11
Identity = 55/199 (27.64%), Postives = 88/199 (44.22%), Query Frame = 0
Query:   45 SLIEQSEKTTEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVER--YTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERLSP 241
            SL+   ++T  +   Y+ SYN+P    +Y+  G+    P+  K   ++  Y  +PR ++    Q +V  ++ MK L+  NDY  D  S G  + A+  RGDL                        P    +G  DAKV  ++ A +     L+ HA  GPT+ +Q  F WSD+  +   F     PD F F++  + P
Sbjct:   35 SLVASGDQTPILRAGYWPSYNIPFYELVYNMSGY----PAFAKKHGQKFSYQLAPRAKIFRRDQSKVQDLSSMKHLMLSNDYQHDPYSQGSPWNAICARGDLI----------------------EPKPKPKGCYDAKVSDLSMALA-----LTSHALSGPTHQEQKPFRWSDNNFKSKHF---GQPDLFNFDFVVMKP 199          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|673037140|ref|XP_008872531.1| (hypothetical protein H310_08521 [Aphanomyces invadans] >gi|574472096|gb|ETV99102.1| hypothetical protein H310_08521 [Aphanomyces invadans])

HSP 1 Score: 74.7146 bits (182), Expect = 1.709e-11
Identity = 58/180 (32.22%), Postives = 81/180 (45.00%), Query Frame = 0
Query:   60 YFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARVGPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERL 239
            Y+ASYN+P    IY+  G      ++  ++   +    R ++       V S+A +KRL++ N+Y  D  SLG    A+A R DL                     N S FA L GA+DAKV SV  A       L   A +GP+ D QP F W+D   E+ A   G  P  F F + R+
Sbjct:  498 YWASYNIPYFEHIYNKSGIAAMASTDSSWS---HQDCARAKIFRRDAPHVQSIAHLKRLMRANNYHHDPLSLGDPGRAIAARYDLAT-------------------NPSEFA-LSGAIDAKVTSVRSA-----RRLECDAVLGPSNDDQPTFVWTDKWTEL-AMHKG-QPTAFNFSFTRM 647          
BLAST of EWM23764.1 vs. NCBI_GenBank
Match: gi|159489882|ref|XP_001702920.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158270943|gb|EDO96773.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 74.3294 bits (181), Expect = 1.772e-11
Identity = 60/194 (30.93%), Postives = 88/194 (45.36%), Query Frame = 0
Query:   50 SEKTTEIPGAYFASYNVPSDREIYDYLGFGLKDPSNIKYAVERYTGSPRERMLSEGQLEVTSMAGMKRLIQYNDYMRDSRSLGHAYLAVAGRGDLEISYVNSLKKENEGNFSFAQMNGSPFASLEGAMDAKVVSVNEAFSSPENHLSLHARV--GPTYDQQPAFCWSDHPEEVNAFENGTHPDCFRFEWERLSP 241
            ++ T E+   Y+ SYNV    E+Y+  G+    P  ++     Y  +PR  +    Q  V +M  +KR+++YND+ +D  + G+   AV  RGDL             G    A+          G  D+KV + + A       L + + V  GPT   QP F WSD P  VN    G  PD F F +ER+SP
Sbjct:  296 ADMTQELARGYWPSYNVAYFPEVYEAAGY----PDMVRVRDWCYQIAPRASIFRRDQGAVANMDSLKRMMRYNDFQKDPIADGNPVGAVCARGDLAT-----------GKDGIAK----------GCYDSKVTTASMA-------LRMESEVIGGPTAQGQPPFSWSD-PRWVNLPHRGM-PDTFDFAFERMSP 455          
The following BLAST results are available for this feature:
BLAST of EWM23764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104975|gb|EWM23764.1|0.000e+0100.00Phospholipase B [Nannochloropsis gaditana][more]
gi|929765765|ref|XP_014157863.1|1.017e-1735.83hypothetical protein SARC_03825 [Sphaeroforma arct... [more]
gi|929765581|ref|XP_014157771.1|1.720e-1733.88hypothetical protein SARC_03894 [Sphaeroforma arct... [more]
gi|1173956780|gb|OQS03481.1|5.881e-1329.17urease, partial [Thraustotheca clavata][more]
gi|471208322|ref|XP_004260756.1|2.378e-1231.64hypothetical protein EIN_181520 [Entamoeba invaden... [more]
gi|922856785|gb|KOO25105.1|2.678e-1233.54phospholipase b-like protein [Chrysochromulina sp.... [more]
gi|145537896|ref|XP_001454659.1|1.130e-1133.51hypothetical protein [Paramecium tetraurelia strai... [more]
gi|156388178|ref|XP_001634578.1|1.163e-1127.64predicted protein [Nematostella vectensis] >gi|156... [more]
gi|673037140|ref|XP_008872531.1|1.709e-1132.22hypothetical protein H310_08521 [Aphanomyces invad... [more]
gi|159489882|ref|XP_001702920.1|1.772e-1130.93predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6925rna6925Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications