EWM23766.1, cds6908 (CDS) Nannochloropsis gaditana

Overview
NameEWM23766.1
Unique Namecds6908
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:22483..23280 -

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Properties
Property NameValue
Protein idEWM23766.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101122g3.5725.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:22483..23280 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
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BLAST of EWM23766.1 vs. NCBI_GenBank
Match: gi|585104980|gb|EWM23766.1| (hypothetical protein Naga_101122g3 [Nannochloropsis gaditana])

HSP 1 Score: 512.301 bits (1318), Expect = 0.000e+0
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 
Query:    1 MPPSATASTPSSSSLPPSLPPSSSPFCLLLHGPRGVGKTTLLAWLAREVTSFPLPPLFLSFPSGASSVTNDIQEALKSIEEGKEGTGREGGREGGREDMARLLLVDGLQSEEMCFDVVAALSNFASSHPSSSSSSSVSTRPSPSSSLSSSPSNPRPKLVALMALCTSSGSDSSSLTPSSSTSLPSSSLRGSVHAHFGLPVLTDFEGEIMPTLERMMEEPLVGESTGKEAMKATMRGLEGVVVMSRALGGKEGRNMLGEMLEHVWV 265
            MPPSATASTPSSSSLPPSLPPSSSPFCLLLHGPRGVGKTTLLAWLAREVTSFPLPPLFLSFPSGASSVTNDIQEALKSIEEGKEGTGREGGREGGREDMARLLLVDGLQSEEMCFDVVAALSNFASSHPSSSSSSSVSTRPSPSSSLSSSPSNPRPKLVALMALCTSSGSDSSSLTPSSSTSLPSSSLRGSVHAHFGLPVLTDFEGEIMPTLERMMEEPLVGESTGKEAMKATMRGLEGVVVMSRALGGKEGRNMLGEMLEHVWV
Sbjct:    1 MPPSATASTPSSSSLPPSLPPSSSPFCLLLHGPRGVGKTTLLAWLAREVTSFPLPPLFLSFPSGASSVTNDIQEALKSIEEGKEGTGREGGREGGREDMARLLLVDGLQSEEMCFDVVAALSNFASSHPSSSSSSSVSTRPSPSSSLSSSPSNPRPKLVALMALCTSSGSDSSSLTPSSSTSLPSSSLRGSVHAHFGLPVLTDFEGEIMPTLERMMEEPLVGESTGKEAMKATMRGLEGVVVMSRALGGKEGRNMLGEMLEHVWV 265
The following BLAST results are available for this feature:
BLAST of EWM23766.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104980|gb|EWM23766.1|0.000e+0100.00hypothetical protein Naga_101122g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6924rna6924Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications