EWM23765.1, cds6907 (CDS) Nannochloropsis gaditana

Overview
NameEWM23765.1
Unique Namecds6907
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:20417..20465 +
Alignment locationCM002470.1:20721..20824 +
Alignment locationCM002470.1:21072..21227 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23765.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101122g1.5724.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:20417..20465 +
CM002470.1supercontigCM002470.1:20721..20824 +
CM002470.1supercontigCM002470.1:21072..21227 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR003812Fido
Homology
[Close]
BLAST of EWM23765.1 vs. NCBI_GenBank
Match: gi|585104979|gb|EWM23765.1| (hypothetical protein Naga_101122g1 [Nannochloropsis gaditana])

HSP 1 Score: 202.986 bits (515), Expect = 4.577e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MGRRPTRHGHFHPLQERNGRFARVVASVLLRRAGFPRALIHSENKILSLNEFFDIVSKEVSARGAKARQRLQHPEERREEVRVQDEATAGAGGRKEERSGSM 102
            MGRRPTRHGHFHPLQERNGRFARVVASVLLRRAGFPRALIHSENKILSLNEFFDIVSKEVSARGAKARQRLQHPEERREEVRVQDEATAGAGGRKEERSGSM
Sbjct:    1 MGRRPTRHGHFHPLQERNGRFARVVASVLLRRAGFPRALIHSENKILSLNEFFDIVSKEVSARGAKARQRLQHPEERREEVRVQDEATAGAGGRKEERSGSM 102
The following BLAST results are available for this feature:
BLAST of EWM23765.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104979|gb|EWM23765.1|4.577e-66100.00hypothetical protein Naga_101122g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6923rna6923Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications