EWM23780.1, cds6895 (CDS) Nannochloropsis gaditana

Overview
NameEWM23780.1
Unique Namecds6895
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:781322..781564 -
Alignment locationCM002469.1:779638..781080 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23780.1
ProductRegulator of chromosome condensation/beta-lactamase-inhibitor protein II
Orig transcript idgnl|cribi|Naga_100330g2.4045.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:781322..781564 -
CM002469.1supercontigCM002469.1:779638..781080 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Homology
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|585105003|gb|EWM23780.1| (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0
Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
Query:    1 MIALRIRQKDVLAATSMVPVRISSFFCLGPSSCIHHSTLPARPLRGYQVAGRFPCARKLRICIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK 561
            MIALRIRQKDVLAATSMVPVRISSFFCLGPSSCIHHSTLPARPLRGYQVAGRFPCARKLRICIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK
Sbjct:    1 MIALRIRQKDVLAATSMVPVRISSFFCLGPSSCIHHSTLPARPLRGYQVAGRFPCARKLRICIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK 561          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|585105002|gb|EWM23779.1| (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 480/481 (99.79%), Postives = 481/481 (100.00%), Query Frame = 0
Query:   81 EGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK 561
            +GYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK
Sbjct:  158 QGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEAGGGGADEDSEKGRKPRRQRRMLRYGEGLIHRLALMKEEDETK 638          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|299116338|emb|CBN76142.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 174.096 bits (440), Expect = 8.151e-45
Identity = 140/440 (31.82%), Postives = 197/440 (44.77%), Query Frame = 0
Query:   37 STLPARPLRGYQVAGRFPCARKLRICIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVS-SCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKR------------FFDSPRKGSAAFLREDVLLSPRAF----PLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGT----RVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLP 455
            S+LP+RP   +Q                  SR+ + H  +Y+ GEG++G LGHGDF  R    P+ ALA   ++  +AGW H+A V    G +L++GRP D+++ L +  + +  PF+V    A+                  P   S A      L   R      P P   R   VACS ALT ++   G+VYCMG N +GQCG G                              NV+T   P++           VG     G    R+ VV +A+GFQ  +    SGR F WGKG RGQLG G  +       ++LPE      +VV + SGF+HA A+ E G V+ WGK QG   +++G      +Y DQL PR+V++ G   G   +  C  F+T  LLR E       R+ M G+ +  R   P    V +P
Sbjct:   10 SSLPSRPRHHHQ------------------SRKRALH--VYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTASTVTAALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPD----------------------------NVFTVFEPLR-----------VG-----GRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEM-------MELPEEVELPGKVVDLRSGFSHAVAILENGDVYTWGKMQGTEVKTDGR---VPVYHDQLYPRKVDVGG---GRAVEAFCSSFNT--LLRMEDG-----RVLMSGLEADTRRTVPTPVEVDIP 365          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|970653667|gb|KUF92107.1| (FAS-associated factor 2-B [Phytophthora nicotianae])

HSP 1 Score: 159.844 bits (403), Expect = 2.349e-39
Identity = 109/375 (29.07%), Postives = 167/375 (44.53%), Query Frame = 0
Query:   47 YQVAGRFP-CARKLRICIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
            YQ+ GR   C   +   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N +A   +   +G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:   67 YQLRGRIVRCTITIAAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 369          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|675197375|ref|XP_008907572.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|567958094|gb|ETK83687.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567986785|gb|ETL37102.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568016094|gb|ETL90271.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568046466|gb|ETM43575.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568092387|gb|ETN07196.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570324367|gb|ETO72315.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570948178|gb|ETP13435.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 154.451 bits (389), Expect = 6.296e-39
Identity = 108/373 (28.95%), Postives = 165/373 (44.24%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N +A   +   +G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|566020708|gb|ETI43619.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 154.066 bits (388), Expect = 1.047e-38
Identity = 108/373 (28.95%), Postives = 164/373 (43.97%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N +A   +    G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NADAPQELIALTGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|570980980|gb|ETP41507.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 154.066 bits (388), Expect = 1.079e-38
Identity = 108/373 (28.95%), Postives = 164/373 (43.97%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N  A   +   +G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NAEAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|675197373|ref|XP_008907571.1| (hypothetical protein PPTG_13562 [Phytophthora parasitica INRA-310] >gi|567958093|gb|ETK83686.1| hypothetical protein L915_11197 [Phytophthora parasitica] >gi|567986784|gb|ETL37101.1| hypothetical protein L916_11094 [Phytophthora parasitica] >gi|568016093|gb|ETL90270.1| hypothetical protein L917_10995 [Phytophthora parasitica] >gi|568046465|gb|ETM43574.1| hypothetical protein L914_11023 [Phytophthora parasitica] >gi|568092386|gb|ETN07195.1| hypothetical protein PPTG_13562 [Phytophthora parasitica INRA-310] >gi|570324366|gb|ETO72314.1| hypothetical protein F444_11574 [Phytophthora parasitica P1976] >gi|570948177|gb|ETP13434.1| hypothetical protein F441_11421 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 155.221 bits (391), Expect = 3.566e-38
Identity = 108/373 (28.95%), Postives = 165/373 (44.24%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N +A   +   +G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|570980979|gb|ETP41506.1| (hypothetical protein F442_11397 [Phytophthora parasitica P10297])

HSP 1 Score: 154.451 bits (389), Expect = 6.642e-38
Identity = 108/373 (28.95%), Postives = 164/373 (43.97%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N  A   +   +G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NAEAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
BLAST of EWM23780.1 vs. NCBI_GenBank
Match: gi|566020707|gb|ETI43618.1| (hypothetical protein F443_11502 [Phytophthora parasitica P1569])

HSP 1 Score: 154.451 bits (389), Expect = 6.984e-38
Identity = 108/373 (28.95%), Postives = 164/373 (43.97%), Query Frame = 0
Query:   49 VAGRFPCARKLRIC-IAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEELEESEVGESGEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVL 420
             A R P    +R   ++  +   S    L S G+G++G LG G ++D  T TP+       +K+ + GWAH   +++ G   ++GR H  R  +   +M + LP LV    +  R             R    L P    LP+GER  ++ CS ALT ++  SG+++ +G N +GQCG+             G EG    P      D                                    D +VDIA G+QH +  T +G  F+WGKGERGQLG G   N +A   +    G ++ KV +GFNH+ A++E G +++WGK      ++E  G       DQ+ PR V        +V+   C  FHT+ +
Sbjct:    8 TACRRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTR------------ARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGI-------------GEEGVSVQPPTHVNID-----------------------------------GDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFGTG-NADAPQELIALTGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESNG-------DQITPRLVR----TSDAVKLFKCSQFHTTFI 308          
The following BLAST results are available for this feature:
BLAST of EWM23780.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105003|gb|EWM23780.1|0.000e+0100.00Regulator of chromosome condensation/beta-lactamas... [more]
gi|585105002|gb|EWM23779.1|0.000e+099.79Regulator of chromosome condensation/beta-lactamas... [more]
gi|299116338|emb|CBN76142.1|8.151e-4531.82conserved unknown protein [Ectocarpus siliculosus][more]
gi|970653667|gb|KUF92107.1|2.349e-3929.07FAS-associated factor 2-B [Phytophthora nicotianae... [more]
gi|675197375|ref|XP_008907572.1|6.296e-3928.95hypothetical protein, variant 1 [Phytophthora para... [more]
gi|566020708|gb|ETI43619.1|1.047e-3828.95hypothetical protein, variant 1 [Phytophthora para... [more]
gi|570980980|gb|ETP41507.1|1.079e-3828.95hypothetical protein, variant 1 [Phytophthora para... [more]
gi|675197373|ref|XP_008907571.1|3.566e-3828.95hypothetical protein PPTG_13562 [Phytophthora para... [more]
gi|570980979|gb|ETP41506.1|6.642e-3828.95hypothetical protein F442_11397 [Phytophthora para... [more]
gi|566020707|gb|ETI43618.1|6.984e-3828.95hypothetical protein F443_11502 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6911rna6911Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications