EWM23781.1, cds6894 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|585105004|gb|EWM23781.1| (hypothetical protein Naga_100330g3 [Nannochloropsis gaditana]) HSP 1 Score: 769.615 bits (1986), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0 Query: 1 MPPSSSRRRQPSLSTLATTATTILLSTTATASPPVRTMARASLAFTSPLHALPRCIKNAHLHSSPFHLPSQHARSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEVPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAKKGLERKKDDSCPDLSPVCMEDRTIAEAELLKLLSAVLVLEPGRSTLQGRVVRSLVVLLIQTDGTSCVNGKQRNEVEKTWPCVSGAIAVKCPPEGSI 376 MPPSSSRRRQPSLSTLATTATTILLSTTATASPPVRTMARASLAFTSPLHALPRCIKNAHLHSSPFHLPSQHARSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEVPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAKKGLERKKDDSCPDLSPVCMEDRTIAEAELLKLLSAVLVLEPGRSTLQGRVVRSLVVLLIQTDGTSCVNGKQRNEVEKTWPCVSGAIAVKCPPEGSI Sbjct: 1 MPPSSSRRRQPSLSTLATTATTILLSTTATASPPVRTMARASLAFTSPLHALPRCIKNAHLHSSPFHLPSQHARSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEVPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAKKGLERKKDDSCPDLSPVCMEDRTIAEAELLKLLSAVLVLEPGRSTLQGRVVRSLVVLLIQTDGTSCVNGKQRNEVEKTWPCVSGAIAVKCPPEGSI 376
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|298708261|emb|CBJ48324.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 169.859 bits (429), Expect = 3.086e-47 Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 0 Query: 42 SLAFTSPLHALPRCIKNAHLHSSPFHLPSQHARSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEF 208 S+A +SP A+ H H HL ++ +SD +GRPSLDDVERLS GQAAKKRGTGSR +CHRLNE ERK +DLAKK G+V LRGTGYRRERKGSPL NI RQ CDA PC V G G DAVDEV +D SP R + V +DS E A+ E Sbjct: 34 SVAASSPAVAVRATTCKRHHH----HLQAKKKKSD--------RGRPSLDDVERLSRGQAAKKRGTGSRGVCHRLNESERKAYDLAKKQGYVVLRGTGYRRERKGSPLQNIFRQFCDAKAMPCTSVLTGQGPDAVDEVEIDFSPLRTSREV-MDSLSEQADAVAAEL 187
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|873233417|emb|CEM03333.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 138.658 bits (348), Expect = 6.548e-35 Identity = 83/190 (43.68%), Postives = 109/190 (57.37%), Query Frame = 0 Query: 82 AYAKGRPSLDDVERLSHGQAAKK--RGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR--PVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEVPSLRAKWERMRESFEEEDWEKKPIWELPVLA 267 A A GR +LDDVER+S GQAA+K RGTGSRN+ HRLN+ ERK +D+AK ++ G+ YRRERKGSPLANI+RQ CDA PCI + +GLG + D VVVDLSP R PV +++ S + S + S+ + VP++ E DW++ IWELP +A Sbjct: 68 ARAPGRAALDDVERISRGQAARKKRRGTGSRNVPHRLNQEERKLYDIAKGRRYLVTSGSAYRRERKGSPLANIYRQWCDAQATPCINIQKGLGPEGSDLVVVDLSPLRRPASHPV-----------MQQLLESLCSLLSSLGCTVVESPSIAAEPSESVPTI--------EGLPALDWDEWAIWELPEVA 238
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|219118859|ref|XP_002180196.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408453|gb|EEC48387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 130.568 bits (327), Expect = 2.504e-30 Identity = 87/207 (42.03%), Postives = 112/207 (54.11%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCI-EVHRGLGTDAVDEVVVDLSPYR-------PVQPVELDSAWEVCVALEEEFLSAAASAVSQ-----EDGTANASSLGEQEGSEVPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAK 280 R S DDVERLS GQ +KK+G GSRN+ HRLN+ ER E D A K GFV GTG RR RKGSPLANIHRQ CDA +P I G +D+V+VDLSP R P + + + W+ +A +AA+++ Q D A+ + L E ++ M E W KPIW+LPV+++ GDR AK Sbjct: 199 RISRDDVERLSRGQPSKKKGYGSRNVPHRLNDEERAEMDRAAKKGFVSFAGTGNRRTRKGSPLANIHRQWCDARDKPQILHFKASGGRQPLDQVIVDLSPLRLNGLFDDPSRVDDFLAKWKADIA------TAASNSGMQIYTRTSDVDADENDLDEDIATDYLVTLDHHAVM------EAWATKPIWKLPVVSFAV-FEGDRPRAK 392
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|1210519506|dbj|GAX21630.1| (hypothetical protein FisN_29Hu067 [Fistulifera solaris]) HSP 1 Score: 112.849 bits (281), Expect = 1.077e-25 Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEVPSLRAKWERMR 247 RP DVER+S G+ AK++GTGSR + HRLN ER F+ A++ GF+++ G+G+R ER+ +PL N HR CDA G+ C+ +H+GL + AVD V+DLSP R P + +S E+ + E QED + Q +P R +WE R Sbjct: 34 RPDKQDVERISWGKPAKQKGTGSRGVPHRLNSDERVLFEQARRKGFLEVVGSGWRSERREAPLLNTHRSWCDARGQACLRLHKGL-SGAVDTFVLDLSPLR--TPEDFESIAEMILKEVE-----GGKVYFQEDLLETPDAWELQPIYRLPPFRIEWELSR 186
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|551534764|ref|XP_005756230.1| (hypothetical protein EMIHUDRAFT_259824, partial [Emiliania huxleyi CCMP1516] >gi|485603023|gb|EOD03801.1| hypothetical protein EMIHUDRAFT_259824, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.612 bits (270), Expect = 7.072e-25 Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSA 197 RP++DDV+R+S G+ AK++GTGSR HRLN+ ER +DLA+ GFV++ G+G+R +R +PL N R CDA G I +H+G VD+VV+DLSP R +P E +A Sbjct: 44 RPTIDDVDRISWGRPAKRKGTGSRGQPHRLNDAERTLYDLARSKGFVEVAGSGWRSQRADAPLVNTFRSWCDARGVAAIFLHKG---SDVDQVVLDLSPLR--RPAEFANA 149
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|922863718|gb|KOO31105.1| (hypothetical protein Ctob_008662, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 116.701 bits (291), Expect = 7.724e-25 Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGL-GTDAVDEVVVDLSPYR 187 RP++DDV+R+S G+ AK++GTGSR + HRLN+ ER +D A++ GFV++ G+G+R ER+ SPL N R CDA G P I +H+G GTD D+VVVDL+P R Sbjct: 113 RPTIDDVDRISWGRNAKQKGTGSRGVPHRLNDDERSLYDFARRKGFVEIGGSGWRSERRDSPLVNTFRSWCDARGVPAIYLHKGRDGTD--DQVVVDLAPLR 212
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|224014865|ref|XP_002297094.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968213|gb|EED86562.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-24 Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 187 RP+LDD+ERLS+G+ AK+RGTGS+ + HRLN ER ++ AK+ ++ ++GTGYRRERKG PL N RQ CDAL + C+ + R G D V++D S R Sbjct: 7 RPTLDDIERLSYGKGAKRRGTGSKYVPHRLNADERTLYNFAKEHNYLCIQGTGYRRERKGKPLCNTFRQRCDALNQLCVVIERRRGGDV--RVMIDFSTLR 105
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|551650137|ref|XP_005827852.1| (hypothetical protein GUITHDRAFT_142486 [Guillardia theta CCMP2712] >gi|428171959|gb|EKX40872.1| hypothetical protein GUITHDRAFT_142486 [Guillardia theta CCMP2712]) HSP 1 Score: 112.464 bits (280), Expect = 1.571e-24 Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAAASAVSQEDGTANASSLGEQEGSEV---------PSLRAKWERMRESFEEED----WEKKPIWELP--VLAYVYNCTGDRGLAKK 281 RP +DDV+R+S G+ AKK+ TGSR + HRLNE ER +D+A++ GF+++ G+G+R++R+G+PLAN +R CDA P I +++ DEVV+DLSP R V LD A C L A +ED +G EG V P +A RE F E+ + PI+ LP V++++ + LAKK Sbjct: 96 RPDIDDVDRISWGKPAKKKTTGSRGVPHRLNEDERILYDMARRKGFIEVAGSGWRKQRRGAPLANTYRNWCDARAIPVISLYK--DKTGYDEVVLDLSPLR-VPDHFLDIA-TFCA----NSLPGAKMEALEEDEVEEVGGMGGLEGMTVEKETGTYGIPEDKADLVEEREKFLRENLKSAYANDPIYRLPMYVVSWIVQRNEAKELAKK 297
BLAST of EWM23781.1 vs. NCBI_GenBank
Match: gi|1072237933|gb|OEU22660.1| (hypothetical protein FRACYDRAFT_223555 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 109.768 bits (273), Expect = 2.035e-24 Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 0 Query: 87 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEE--EFLSAAASAVSQEDGTANASSLGE-----QEGSEVPSLRAKWERMRESFEEED---WEKKPIWELP 264 RP ++DVER+S G+ AKK+GTGSR + HRLN ER FD A++ GF+Q+ G+G+R +R+ +PL N +R LCDA G+ I +H+ +DE+V DLS R P + C+ L+E E + + + DG N L ++G + + E+ ++ED WE +PI++LP Sbjct: 5 RPDVNDVERISWGKPAKKKGTGSRGVPHRLNLDERFLFDKARREGFLQMEGSGWRSQRREAPLLNTYRSLCDARGQASIILHK--RDTGIDELVCDLSTLR--NPKIFHDVAKKCLELQEGGEIVFQGSETDTINDGN-NDEDLSMILSTVEDGGNIEN--------NENLDDEDTGPWETRPIYQLP 179 The following BLAST results are available for this feature:
BLAST of EWM23781.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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