EWM23782.1, cds6893 (CDS) Nannochloropsis gaditana

Overview
NameEWM23782.1
Unique Namecds6893
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:776262..776300 +
Alignment locationCM002469.1:776511..777434 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23782.1
ProductSMP-30/Gluconolaconase/LRE-like region
Orig transcript idgnl|cribi|Naga_100330g4.4047.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:776262..776300 +
CM002469.1supercontigCM002469.1:776511..777434 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like
IPR013658SGL
IPR005511SMP-30
Homology
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|585105005|gb|EWM23782.1| (SMP-30/Gluconolaconase/LRE-like region [Nannochloropsis gaditana])

HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
Query:    1 MANHPSASPRLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEVETPGLPEGRFMG 320
            MANHPSASPRLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEVETPGLPEGRFMG
Sbjct:    1 MANHPSASPRLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEVETPGLPEGRFMG 320          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|1175383820|ref|WP_081931612.1| (hypothetical protein [Rhizobium sp. YR519])

HSP 1 Score: 201.83 bits (512), Expect = 2.098e-59
Identity = 129/322 (40.06%), Postives = 177/322 (54.97%), Query Frame = 0
Query:    3 NHPSASPRLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERS-ASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPP-GVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVE----GKEEGAGGLWAMEVETPGLPEGRF 318
            N  + SP +V D +N LGES VWD +   L W +I  + + ++SP D R+     L +R G+I LR++  GL+ A E GF+  +P    T            A +E    R+    RLNDGR D  GRF+ GG +       ++        VY ++AG         + L   + CANSIC+SPDG+  YFTD P R I  +DYD +TG V   +RR F  +    G+ DGS VD+ GYLWNA++  G+VVRY+P+G VDR V LPVS  TC C GG DL TL++TSA  G++     +E  AG + A+     G+PE RF
Sbjct:   12 NVSADSPTVVCDCRNNLGESVVWDEKTARLWWANIHEREIWSWSPTDGRAPVGTKLDERVGAIGLRQSA-GLIVALESGFSFHDPETGTTQRI---------ADVE----RELPTTRLNDGRIDPAGRFVCGGMDESSPQKGIS-------AVYVLDAG------GKPKTLINGIHCANSICWSPDGAVFYFTDMPSRRIDAYDYDVSTGEV--SNRRTFVDLRDEVGLADGSTVDADGYLWNAQWGGGKVVRYAPDGSVDREVGLPVSNPTCLCFGGEDLSTLYITSAWFGLDVSARAREPHAGSILALRPGVRGVPEHRF 304          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|1092377062|gb|OHV87497.1| (hypothetical protein ORS3428_21225 [Mesorhizobium sp. ORS3428])

HSP 1 Score: 200.675 bits (509), Expect = 3.063e-59
Identity = 126/318 (39.62%), Postives = 171/318 (53.77%), Query Frame = 0
Query:   10 RLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTN-AAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNG--DEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGK----EEGAGGLWAMEVETPGLPEGRFMG 320
            R V   ++ LGE PVWDV  Q L W+DIEG+ L     A  +   +S P+R  S ALRE   GL+ A   G A F+P     +  AKP  +I              A  R N+G+CDR+GRF  G  +    E   ++ R  +AD  +  VE G G                +NS+ +SPD    YF D+  R I+ +D+D+  G   V  +R+FA+   PG PDGS +D+ GYLWNAE+   R+VRY+P+G +DR+V+LPV + T    G  DLKTLF+TSA   +  +    +  AG L A+EVE PGLPE RF G
Sbjct:    5 REVYASRDKLGEVPVWDVAEQALYWVDIEGRRLRRLDHASGKVDEWSFPERICSFALREKG-GLICALASGLAFFDPATGRIDWIAKPEAHI--------------ARNRFNEGKCDRQGRFWVGSMDDRLSEHTGALYRV-DADLTITQVETGIG---------------ISNSLVWSPDEKTFYFADTMDRAIYAYDFDREAG--AVSRKRLFASTKAPGSPDGSTIDAEGYLWNAEWDGWRLVRYAPDGSIDRIVELPVQKPTSCMFGXPDLKTLFVTSAIWDLNAEALASQPMAGSLLAVEVEVPGLPEPRFKG 289          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|1179586978|ref|WP_083355186.1| (hypothetical protein [Mesorhizobium sp. ORS3428])

HSP 1 Score: 200.675 bits (509), Expect = 4.346e-59
Identity = 126/318 (39.62%), Postives = 171/318 (53.77%), Query Frame = 0
Query:   10 RLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTN-AAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNG--DEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGK----EEGAGGLWAMEVETPGLPEGRFMG 320
            R V   ++ LGE PVWDV  Q L W+DIEG+ L     A  +   +S P+R  S ALRE   GL+ A   G A F+P     +  AKP  +I              A  R N+G+CDR+GRF  G  +    E   ++ R  +AD  +  VE G G                +NS+ +SPD    YF D+  R I+ +D+D+  G   V  +R+FA+   PG PDGS +D+ GYLWNAE+   R+VRY+P+G +DR+V+LPV + T    G  DLKTLF+TSA   +  +    +  AG L A+EVE PGLPE RF G
Sbjct:   17 REVYASRDKLGEVPVWDVAEQALYWVDIEGRRLRRLDHASGKVDEWSFPERICSFALREKG-GLICALASGLAFFDPATGRIDWIAKPEAHI--------------ARNRFNEGKCDRQGRFWVGSMDDRLSEHTGALYRV-DADLTITQVETGIG---------------ISNSLVWSPDEKTFYFADTMDRAIYAYDFDREAG--AVSRKRLFASTKAPGSPDGSTIDAEGYLWNAEWDGWRLVRYAPDGSIDRIVELPVQKPTSCMFGXPDLKTLFVTSAIWDLNAEALASQPMAGSLLAVEVEVPGLPEPRFKG 301          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|1189876820|ref|WP_085877751.1| (hypothetical protein [Roseisalinus antarcticus] >gi|1188054835|emb|SLN26713.1| L-arabinolactonase [Roseisalinus antarcticus])

HSP 1 Score: 200.29 bits (508), Expect = 4.961e-59
Identity = 127/322 (39.44%), Postives = 179/322 (55.59%), Query Frame = 0
Query:   10 RLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNA----AKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGD--ASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATV-PPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGK----EEGAGGLWAMEVETPGLPEGRFMG 320
            RL    +N LGE PVWD ++Q L W+DIEG+ L            ++LP+R GS ALRE   G++ AF  GFA ++    +T A    A+P   +P                R NDG+ DRRGRF AG  +    +  AS+ R  + D  V+ +E G G                +N++C+SPD    YF D+  +EIWV+D+D A+G   + +RRVFAT    PG PDGS +D+ G++WNA++   R+VRY+P+G VDRVV LPV + T    GG DLKTL++T+A   ++ +    +  AG L A++V   GLPE RF G
Sbjct:    5 RLAAKAENTLGEVPVWDPRSQALWWVDIEGRLLQRLHQPSGEIRVWTLPERIGSFALREGG-GVVCAFASGFAFYD---LETGAVDWIARPEADLPGN--------------RFNDGKVDRRGRFWAGTMDDSLSNRTASLYRL-DPDLTVHRMETGVG---------------ISNALCWSPDDRLFYFADTLQQEIWVYDHDAASG--AIGNRRVFATTHDQPGQPDGSTIDAEGFMWNAQWDGWRLVRYAPDGSVDRVVDLPVQKPTSCMFGGTDLKTLYVTTAIWDLDQRTLADQPWAGSLLALDVGVAGLPETRFAG 290          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|852029449|ref|WP_048260035.1| (gluconolaconase [Pectobacterium carotovorum] >gi|848442594|gb|KML67223.1| gluconolaconase [Pectobacterium carotovorum subsp. carotovorum UGC32])

HSP 1 Score: 197.208 bits (500), Expect = 8.553e-58
Identity = 117/312 (37.50%), Postives = 165/312 (52.88%), Query Frame = 0
Query:   10 RLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEVET-PGLPEGRFMG 320
            ++ +D KN+LGE P+W    + L W +I GK L  Y P    +  +++P+R GS  L + +D LL   E   A FN     T      V  P  +  ET         R+NDGRCDR G ++ G  +  E   S+   +  +     VE          R  LP  V  ANS+CFSPDG  +Y+ DS  + I   DY        +D++R+FA V   G PDGSC+D+ G+LWNAE+   RVVRY+P+G VD V+ LP  + TCP +GG +  TL+ TSA VG+   ++  G L+ ++ +   GLPE RF G
Sbjct:    3 KITVDAKNLLGECPLWCEHTRRLFWTNIVGKELLAYHPESGATQRWTMPERLGSFGLTQTEDILLLGLESRLAFFN---LQTEVLSNIVLSPGSS--ET---------RINDGRCDRDGNYVFGTMHEGEPPQSVGAFYRFNAATLDVE----------RLALP-SVAIANSLCFSPDGGTMYYCDSLQKRILCCDYPS------LDNQRIFAEVSGEGAPDGSCIDAMGFLWNAEWGGSRVVRYNPDGVVDSVLTLPAVQTTCPVMGGDEYDTLYCTSARVGLSSPKKDDGALFEVKSDKFKGLPESRFAG 283          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|654640194|ref|WP_028101383.1| (gluconolaconase [Pseudoduganella violaceinigra])

HSP 1 Score: 193.741 bits (491), Expect = 1.448e-56
Identity = 124/311 (39.87%), Postives = 164/311 (52.73%), Query Frame = 0
Query:   11 LVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFK-VRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPP-PGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEV-ETPGLPEGRF 318
            LV+D +N+LGE  VW  + Q L W DI G+ L  ++P++  S  + +P+R  S AL   DD LL   E   A FN  +TD            +    TE       VRLNDGRCDR+GRF+ G  N   G A +   +                     E LP   V  ANSICFSPDG  +YF DS    I   DY +      +   R FA +PP  G PDGS VD+ G+LWNAE+ +GR+VRY P+G ++R + +PVS+ TCP  GG  L  LF+TSA + +   E  AGG+++  V +  GLPE RF
Sbjct:    3 LVIDAQNVLGECAVWCDRKQCLWWTDILGRALWRFTPSNGTSQMWEMPERLASFALTHNDDRLLLGLESRLAWFN--LTDK-----------QILTITEVEADKPDVRLNDGRCDRQGRFVFGTMNEALGRAPIGSFFRL-------------GHELQLEQLPLSPVAIANSICFSPDGQIMYFCDSLSGAIRCCDYGEQ-----ISGEREFALLPPGCGEPDGSLVDADGFLWNAEWGAGRIVRYRPDGTIERAIAVPVSQPTCPAFGGAKLDELFVTSALIDLLVTEPHAGGVFSTRVTDAVGLPESRF 282          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|1099660821|emb|SFG12909.1| (L-arabinonolactonase [Duganella sp. CF458])

HSP 1 Score: 194.126 bits (492), Expect = 1.570e-56
Identity = 127/311 (40.84%), Postives = 164/311 (52.73%), Query Frame = 0
Query:   11 LVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPFK-VRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPP-GVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEGKEEGAGGLWAMEV-ETPGLPEGRF 318
            L++D +N LGE  VW  + Q LLW DI G+ L  + P+   +  + +P+R  S AL  A+  LL   E   A F+                 EA    E     A  R+NDGRCDR+GRF+ G  N   G A + R        Y +   +        ELLP   V  ANSICFSPDG+ +YF DS    I   DY        V   R+FA +PP  G PDGS VD+ G+LWNAE+ + R+VRY P+G V+R V +PVS+ TCP  GG DL  LF+TSA V +   E  AGG++ M V +  GLPE RF
Sbjct:    3 LIVDAQNALGECIVWCGRTQALLWTDILGRKLWRHRPSSGETRQWDMPERLASFALTAAEGRLLLGLESRLAWFD-------------LATGEAMTIVEVEADVAATRINDGRCDRQGRFVFGTMNEAIGRAPVGR-------FYRLGHNR------QLELLPLSPVAIANSICFSPDGATMYFCDSLSGLIRCCDYGDD-----VSGERIFAHLPPGCGEPDGSVVDADGFLWNAEWGASRIVRYRPDGSVERAVAVPVSQPTCPVFGGPDLNQLFVTSALVDLLESERYAGGVFGMPVTDAVGLPEVRF 282          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|921253155|ref|WP_053196191.1| (gluconolaconase [Herbaspirillum hiltneri] >gi|917676773|gb|AKZ62515.1| gluconolaconase [Herbaspirillum hiltneri N3])

HSP 1 Score: 193.741 bits (491), Expect = 1.781e-56
Identity = 125/319 (39.18%), Postives = 174/319 (54.55%), Query Frame = 0
Query:   11 LVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHAL--VRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPF-KVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVP-PPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVE----GKEEGAGGLWAMEVE-TPGLPEGRFMG 320
            L++D K+ LGE  +W  + Q + W DI+G TL  ++PA+  + S+ +P+R    AL    D LL       A FN                D   I T    +  L   RLNDGRCDR+GRF+ G  N D+G A +   +  +           D SF   E LP   V  +NSICFSPDG+ +YF D+   +I   DYD  +G   V +  +F  +    G PDGS +DS GYLWNA++   RVVRY+P+G VDR+V +PVS+ +CP  GG +L TLF+T+A  G++     +E  AGGL+A+ ++   GLPE RF G
Sbjct:    5 LIVDGKHELGECAIWCDRTQSIFWTDIQGATLWNHNPANGATRSWPMPERLSVFALTAQTDRLLIGLASRLAFFNL---------------DSGEITTIRSVEQDLPTTRLNDGRCDRQGRFVFGTLNEDKGRAPIGSFYRLNT----------DLSF---ERLPLPGVAISNSICFSPDGTRMYFCDTMQDKIMSCDYDPVSG--AVGAYSLFVDLAGEKGGPDGSAIDSQGYLWNAQWGGARVVRYAPDGLVDRIVAVPVSQPSCPAFGGANLDTLFVTTAHEGMDEAARTREPTAGGLFAVTLDGVRGLPEVRFGG 293          
BLAST of EWM23782.1 vs. NCBI_GenBank
Match: gi|515280423|ref|WP_016836716.1| (gluconolaconase [Herbaspirillum lusitanum])

HSP 1 Score: 192.971 bits (489), Expect = 3.508e-56
Identity = 122/319 (38.24%), Postives = 173/319 (54.23%), Query Frame = 0
Query:   11 LVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHAL--VRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVEAGKGDASFAARELLPF-KVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVP-PPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVEG----KEEGAGGLWAMEVE-TPGLPEGRFMG 320
            L++D K+ LGE  +W  + Q + W DI+G TL  ++PA+  + S+ +P+R    AL    D LL       A FN                D   I T    +  L   RLNDGRCDR+GRF+ G  N D+G A +   +  +  +             + E LP   V  +NSICFSPDG+ +YF D+   +I   DYD  +G   + ++ VF  +    G PDGS +DS GYLWNA++   RVVRY+P+G VDR+V +PVS+ +CP  GG DL TL++T+A  G+      +E  AGGL+A+ ++   GLPE RF G
Sbjct:    5 LIVDGKHELGECAIWCDRTQSIFWTDIQGATLWNHNPANGATHSWPMPERLSVFALTGQTDRLLIGLASRLAFFNL---------------DSGEITTIRTVEEDLPTTRLNDGRCDRQGRFVFGTLNEDQGRAPIGSFYRLNTDL-------------SLERLPLPGVAISNSICFSPDGARMYFCDTMQGKIMSCDYDPVSG--AIGAQDVFVDLAGEKGSPDGSAIDSQGYLWNAQWGGARVVRYAPDGLVDRIVAVPVSQPSCPAFGGADLDTLYVTTAHEGMNMLQRVEESKAGGLFAVRLDGIRGLPEVRFGG 293          
The following BLAST results are available for this feature:
BLAST of EWM23782.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105005|gb|EWM23782.1|0.000e+0100.00SMP-30/Gluconolaconase/LRE-like region [Nannochlor... [more]
gi|1175383820|ref|WP_081931612.1|2.098e-5940.06hypothetical protein [Rhizobium sp. YR519][more]
gi|1092377062|gb|OHV87497.1|3.063e-5939.62hypothetical protein ORS3428_21225 [Mesorhizobium ... [more]
gi|1179586978|ref|WP_083355186.1|4.346e-5939.62hypothetical protein [Mesorhizobium sp. ORS3428][more]
gi|1189876820|ref|WP_085877751.1|4.961e-5939.44hypothetical protein [Roseisalinus antarcticus] >g... [more]
gi|852029449|ref|WP_048260035.1|8.553e-5837.50gluconolaconase [Pectobacterium carotovorum] >gi|8... [more]
gi|654640194|ref|WP_028101383.1|1.448e-5639.87gluconolaconase [Pseudoduganella violaceinigra][more]
gi|1099660821|emb|SFG12909.1|1.570e-5640.84L-arabinonolactonase [Duganella sp. CF458][more]
gi|921253155|ref|WP_053196191.1|1.781e-5639.18gluconolaconase [Herbaspirillum hiltneri] >gi|9176... [more]
gi|515280423|ref|WP_016836716.1|3.508e-5638.24gluconolaconase [Herbaspirillum lusitanum][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6909rna6909Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications