EWM23784.1, cds6890 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|585105008|gb|EWM23784.1| (nudix family protein [Nannochloropsis gaditana]) HSP 1 Score: 446.817 bits (1148), Expect = 9.200e-159 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLRGAFIDKKMAEPSRESKGGFYFGTEDAG 220
MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLRGAFIDKKMAEPSRESKGGFYFGTEDAG
Sbjct: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLRGAFIDKKMAEPSRESKGGFYFGTEDAG 220
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|299115250|emb|CBN74091.1| (Adenylate kinase family protein [Ectocarpus siliculosus]) HSP 1 Score: 218.779 bits (556), Expect = 3.037e-64 Identity = 101/193 (52.33%), Postives = 132/193 (68.39%), Query Frame = 0
Query: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLR 193
MI FGVP++GVH+NGYV+ P + +W+G+RS SKATYPG+ D + AGGQP+G+ F EN KE EEEAS+P L ++P G +SYRY T+ GLSTK L VFDLE+P F+PYNGDGEVE F LMP+ EAL +++ +L+ WKPN AL ++DFA+RHG +D DH Y+E+ H LR
Sbjct: 424 MIHFGVPSYGVHLNGYVKATDTEP------------------MRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIQPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEVEEFILMPVEEALKTIKTDLARWKPNCALVMIDFALRHGFLDPDHPDYLELVHQLR 598
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|551655568|ref|XP_005830558.1| (hypothetical protein GUITHDRAFT_110383 [Guillardia theta CCMP2712] >gi|428174684|gb|EKX43578.1| hypothetical protein GUITHDRAFT_110383 [Guillardia theta CCMP2712]) HSP 1 Score: 169.474 bits (428), Expect = 3.423e-48 Identity = 85/190 (44.74%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 4 FGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLR 193
FGV +GVH+N VR TS +W+ R+ +KATYPG D AGGQP GL+ EN VKE EEEA IP+ + RP G +SY Y T GLS K L +DLE+P F+P DGEV+SF MP+ EA+ S+ ++ +WKPN+AL ++D A+RHG ++ D +Y+EI LLR
Sbjct: 106 FGVAAYGVHVNVLVR----------EERGTS----------VWIAKRALTKATYPGKLDQCVAGGQPQGLSLTENVVKECEEEAGIPQQVAATARPVGAVSYMYATNKGLSPKTLFCYDLEVPRDFVPRALDGEVDSFQKMPIEEAMRSVADQVDMWKPNSALVMIDLAIRHGILNGDEPNYLEILSLLR 275
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|676387375|ref|XP_009036966.1| (hypothetical protein AURANDRAFT_26480, partial [Aureococcus anophagefferens] >gi|323452361|gb|EGB08235.1| hypothetical protein AURANDRAFT_26480, partial [Aureococcus anophagefferens]) HSP 1 Score: 163.31 bits (412), Expect = 2.619e-47 Identity = 96/194 (49.48%), Postives = 123/194 (63.40%), Query Frame = 0
Query: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLL-QGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLR 193
++ FGV ++G H++GYV + P++ +WV R+ SK TY GL D +AAGG P+ LT LENA KEAEEEASIPR +L + LRP G +SY+Y K GLS K L VFDL LP +P NGDGEV+ F L+P+ EA+ SL EL WKPN+AL +LDFA+RHG VD D ++ I LR
Sbjct: 9 VVAFGVVSYGCHVSGYV-----AGDDGRPAA-------------VWVATRALSKPTYAGLYDQIAAGGLPAELTLLENAKKEAEEEASIPRAVLDRDLRPAGCVSYKYAAKRGLSAKTLVVFDLRLPRELVPMNGDGEVDEFRLVPVDEAVDSLRDELFKWKPNSALVMLDFAMRHGFVDPDDPEFVPIAQALR 184
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|1189380160|gb|OSX68594.1| (hypothetical protein BU14_2525s0001 [Porphyra umbilicalis]) HSP 1 Score: 162.925 bits (411), Expect = 2.578e-46 Identity = 85/191 (44.50%), Postives = 114/191 (59.69%), Query Frame = 0
Query: 4 FGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHE-HYIEICHLLR 193
FG+ +G+H+NGYVR L +WV RS +KATY GL D + AGG PSG++ +EN KEA EEA + L L G +SYRY+T+ GLS K L ++DLELPPSF P N DGEVE F+L+P+S L S+ L WKPN+A+ +++FAVRHG ++ E Y+ + LR
Sbjct: 90 FGLRGYGIHVNGYVRRDG--------------------QLFVWVATRSHNKATYAGLFDQMVAGGLPSGVSLIENVAKEAVEEAGVDLADLDNLTSVGSLSYRYETRKGLSAKSLFLYDLELPPSFTPINLDGEVEEFNLVPVSAVLESIACNLRAWKPNSAVVMIEFAVRHGVINPTCEPDYLRLSKYLR 260
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|1016234117|ref|WP_062948174.1| (DUF4743 domain-containing protein [Thalassospira lucentensis] >gi|1016020198|gb|KZB69123.1| NTP pyrophosphohydrolase [Thalassospira lucentensis]) HSP 1 Score: 155.606 bits (392), Expect = 4.310e-43 Identity = 82/191 (42.93%), Postives = 109/191 (57.07%), Query Frame = 0
Query: 4 FGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLRG 194
FG + GVH+NGYVR + +H+WV R+ K TYPG+ D + AGGQP+GL FLEN +KE EEA+IP L + L+P G ISY Y+T GL ++ +DLELP F+P DGEVE F L+PL+E + +K N AL ++DF +RHG + AD+E E C L G
Sbjct: 113 FGFRSWGVHMNGYVR--------------------KDNDIHMWVAHRAKDKPTYPGMLDNMVAGGQPAGLGFLENMIKECAEEAAIPETLARNLKPVGTISYLYETNEGLKPDVMVNYDLELPADFVPQCADGEVERFELLPLAEVAEIVRKSFD-FKFNCALVIIDFLIRHGFLTADNEP--EYCQLTTG 280
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|1016260803|ref|WP_062961109.1| (DUF4743 domain-containing protein [Thalassospira xiamenensis] >gi|1016001685|gb|KZB51039.1| NTP pyrophosphohydrolase [Thalassospira xiamenensis]) HSP 1 Score: 153.295 bits (386), Expect = 3.741e-42 Identity = 81/191 (42.41%), Postives = 108/191 (56.54%), Query Frame = 0
Query: 4 FGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHEHYIEICHLLRG 194
FG + GVH+NGYVR + +H+WV R+ K TYP + D + AGGQP+GL FLEN +KE EEA+IP L + L+P G ISY Y+T GL ++ +DLELP F+P DGEVE F L+PL+E + +K N AL ++DF +RHG + AD+E E C L G
Sbjct: 113 FGFRSWGVHMNGYVR--------------------KGNDIHMWVAHRAKDKPTYPSMLDNMVAGGQPAGLGFLENMIKECAEEAAIPETLSRNLKPVGTISYLYETNEGLKPDVMVNYDLELPADFVPQCADGEVERFELLPLAEVAEIVRKSFD-FKFNCALVIIDFLIRHGFLTADNEP--EYCQLTTG 280
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|1046636808|ref|WP_065701775.1| (MULTISPECIES: DUF4743 domain-containing protein [Thalassospira] >gi|1046349747|gb|OCK06199.1| thiamine pyrophosphokinase [Thalassospira sp. KO164] >gi|1089029455|emb|SED58575.1| protein of unknown function [Thalassospira sp. KO164] >gi|1095599472|gb|OHZ02166.1| DUF4743 domain-containing protein [Thalassospira sp. MIT1004]) HSP 1 Score: 151.369 bits (381), Expect = 2.043e-41 Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = 0
Query: 4 FGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHE 183
FG + GVH+NGYV+ +H+W+ R+ K TYPG+ D + AGGQP+GL FLEN +KE EEA+IP L + L+P G +SY Y+T GL ++ +DLELP F+P DGEVE F LMPL+E + +K N AL ++DF +RHG + AD+E
Sbjct: 113 FGFRSWGVHMNGYVQ--------------------KDDGIHMWIAHRAKDKPTYPGMLDNMVAGGQPTGLGFLENMIKECAEEAAIPENLSRNLKPVGTVSYLYETTEGLKPDVMVNYDLELPADFVPRCADGEVERFELMPLAEVAEIVRSSFD-FKFNCALVIIDFLIRHGFLTADNE 271
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|494150422|ref|WP_007090167.1| (DUF4743 domain-containing protein [Thalassospira xiamenensis] >gi|745810794|gb|AJD53490.1| NTP pyrophosphohydrolase including oxidative damage repair enzyme [Thalassospira xiamenensis M-5 = DSM 17429] >gi|1131950513|emb|SIT07344.1| protein of unknown function [Thalassospira xiamenensis M-5 = DSM 17429]) HSP 1 Score: 150.984 bits (380), Expect = 2.506e-41 Identity = 77/183 (42.08%), Postives = 105/183 (57.38%), Query Frame = 0
Query: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHE 183
M FG + GVH+NGYV+ +H+W+ R+ K TYPG+ D + AGGQP+GL FLEN +KE EEA+IP L + L+P G +SY Y+T GL ++ +DLELP F+P DGEVE F LMPL+E + +K N AL ++DF +RHG + AD+E
Sbjct: 110 MPYFGFRSWGVHMNGYVQ--------------------KDDGIHMWIAHRAKDKPTYPGMLDNMVAGGQPTGLGFLENMIKECAEEAAIPENLSRNLKPVGTVSYLYETTEGLKPDVMVNYDLELPADFVPRCADGEVERFELMPLAEVAEIVRSSFD-FKFNCALVIIDFLIRHGFLTADNE 271
BLAST of EWM23784.1 vs. NCBI_GenBank
Match: gi|1189219897|ref|WP_085645905.1| (DUF4743 domain-containing protein [Thalassospira sp. MCCC 1A03138] >gi|1187729839|gb|OSQ28810.1| NTP pyrophosphohydrolase [Thalassospira sp. MCCC 1A03138]) HSP 1 Score: 150.214 bits (378), Expect = 4.671e-41 Identity = 76/183 (41.53%), Postives = 105/183 (57.38%), Query Frame = 0
Query: 1 MIKFGVPTHGVHINGYVRLPAPSPPSSSPSSSTSAPPSPASSLHIWVGIRSPSKATYPGLRDVLAAGGQPSGLTFLENAVKEAEEEASIPRGLLQGLRPGGMISYRYQTKHGLSTKLLNVFDLELPPSFIPYNGDGEVESFHLMPLSEALHSLEHELSLWKPNAALTVLDFAVRHGAVDADHE 183
M FG + GVH+NGYV+ +H+W+ R+ K TYPG+ D + AGGQP+GL FLEN +KE EEA+IP L + L+P G +SY Y+T GL ++ +DLELP F+P DGEVE F LMPL++ + +K N AL ++DF +RHG + AD+E
Sbjct: 110 MPYFGFRSWGVHMNGYVQ--------------------KDEGIHMWIAHRAKDKPTYPGMLDNMVAGGQPTGLGFLENMIKECAEEAAIPENLSRNLKPVGTVSYLYETTEGLKPDVMVNYDLELPADFVPRCADGEVEQFELMPLADVAEIVRSSFD-FKFNCALVIIDFLIRHGFLTADNE 271 The following BLAST results are available for this feature:
BLAST of EWM23784.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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